RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 NPR1P16066 1061 aa10.36□□□□□ -0.75
SND1-202ENST00000461056 CCT4P50991 539 aaKnown RBP10.36□□□□□ -0.75
SND1-202ENST00000461056 FOXO4P98177 505 aa10.36□□□□□ -0.75
SND1-202ENST00000461056 ZKSCAN2Q63HK3 967 aa10.36□□□□□ -0.75
SND1-202ENST00000461056 UBE3BQ7Z3V4 1068 aa10.36□□□□□ -0.75
SND1-202ENST00000461056 ANKRD44Q8N8A2 993 aa10.36□□□□□ -0.75
SND1-202ENST00000461056 IPO8O15397 1037 aaKnown RBP10.35□□□□□ -0.75
SND1-202ENST00000461056 CTSWP56202 376 aa10.35□□□□□ -0.75
SND1-202ENST00000461056 RABL6Q3YEC7 729 aaPredicted RBP10.35□□□□□ -0.75
SND1-202ENST00000461056 SLC4A10Q6U841 1118 aa10.35□□□□□ -0.75
SND1-202ENST00000461056 TTLL11Q8NHH1 800 aa10.35□□□□□ -0.75
SND1-202ENST00000461056 MASTLQ96GX5 879 aa10.35□□□□□ -0.75
SND1-202ENST00000461056 CRAMP1Q96RY5 1269 aa10.35□□□□□ -0.75
SND1-202ENST00000461056 H0YIN7 160 aa10.34□□□□□ -0.75
SND1-202ENST00000461056 PDE8AO60658 829 aa10.34□□□□□ -0.75
SND1-202ENST00000461056 RTL5Q5HYW3 569 aaPredicted RBP10.34□□□□□ -0.75
SND1-202ENST00000461056 C20orf194Q5TEA3 1177 aa10.34□□□□□ -0.75
SND1-202ENST00000461056 PRPF40BQ6NWY9 871 aaKnown RBP10.34□□□□□ -0.75
SND1-202ENST00000461056 KLHL34Q8N239 644 aa10.34□□□□□ -0.75
SND1-202ENST00000461056 TMEM57Q8N5G2 664 aa10.34□□□□□ -0.75
SND1-202ENST00000461056 FRAT1Q92837 279 aaPredicted RBP10.34□□□□□ -0.75
SND1-202ENST00000461056 SUCLG2Q96I99 432 aa10.34□□□□□ -0.75
SND1-202ENST00000461056 MEIS3Q99687 375 aa10.34□□□□□ -0.75
SND1-202ENST00000461056 PIM2Q9P1W9 311 aa10.34□□□□□ -0.75
SND1-202ENST00000461056 PLIN1O60240 522 aa10.33□□□□□ -0.76
SND1-202ENST00000461056 PRELPP51888 382 aa10.33□□□□□ -0.76
SND1-202ENST00000461056 DALRD3Q5D0E6 543 aaKnown RBP10.33□□□□□ -0.76
SND1-202ENST00000461056 DZIP1LQ8IYY4 767 aaKnown RBP10.33□□□□□ -0.76
SND1-202ENST00000461056 TTLL6Q8N841 843 aa10.33□□□□□ -0.76
SND1-202ENST00000461056 PANK1Q8TE04 598 aa10.33□□□□□ -0.76
SND1-202ENST00000461056 NLRP3Q96P20 1036 aa10.33□□□□□ -0.76
SND1-202ENST00000461056 SEC31BQ9NQW1 1179 aa10.33□□□□□ -0.76
SND1-202ENST00000461056 DUOX1Q9NRD9 1551 aa10.32□□□□□ -0.76
SND1-202ENST00000461056 NFKBIEO00221 500 aa10.32□□□□□ -0.76
SND1-202ENST00000461056 GTF2E1P29083 439 aaPredicted RBP10.32□□□□□ -0.76
SND1-202ENST00000461056 GRAPQ13588 217 aa10.32□□□□□ -0.76
SND1-202ENST00000461056 OLFM4Q6UX06 510 aa10.32□□□□□ -0.76
SND1-202ENST00000461056 GRAPLQ8TC17 118 aaPredicted RBP10.32□□□□□ -0.76
SND1-202ENST00000461056 CELF1Q92879 486 aaKnown RBP10.32□□□□□ -0.76
SND1-202ENST00000461056 CNKSR1Q969H4 720 aa10.32□□□□□ -0.76
SND1-202ENST00000461056 CLUAP1Q96AJ1 413 aa10.32□□□□□ -0.76
SND1-202ENST00000461056 GREM2Q9H772 168 aa10.32□□□□□ -0.76
SND1-202ENST00000461056 LRRC37AA6NMS7 1700 aa10.32□□□□□ -0.76
SND1-202ENST00000461056 SLX4Q8IY92 1834 aa10.31□□□□□ -0.76
SND1-202ENST00000461056 LTBP1Q14766 1721 aa10.31□□□□□ -0.76
SND1-202ENST00000461056 ZBTB7BO15156 539 aaPredicted RBP10.31□□□□□ -0.76
SND1-202ENST00000461056 RFX5P48382 616 aaPredicted RBP10.31□□□□□ -0.76
SND1-202ENST00000461056 RRP1P56182 461 aaKnown RBP10.31□□□□□ -0.76
SND1-202ENST00000461056 MTX1Q13505 466 aa10.31□□□□□ -0.76
SND1-202ENST00000461056 PDE3AQ14432 1141 aa10.31□□□□□ -0.76
SND1-202ENST00000461056 FAM161AQ3B820 660 aa10.31□□□□□ -0.76
SND1-202ENST00000461056 BICC1Q9H694 974 aaKnown RBP10.31□□□□□ -0.76
SND1-202ENST00000461056 LTBP3Q9NS15 1303 aa10.31□□□□□ -0.76
SND1-202ENST00000461056 NPHP1O15259 732 aa10.3□□□□□ -0.76
SND1-202ENST00000461056 HSP90B1P14625 803 aaKnown RBP10.3□□□□□ -0.76
SND1-202ENST00000461056 CCDC152Q4G0S7 254 aa10.3□□□□□ -0.76
SND1-202ENST00000461056 LMBR1LQ6UX01 489 aa10.3□□□□□ -0.76
SND1-202ENST00000461056 ZNF622Q969S3 477 aaKnown RBP eCLIP10.3□□□□□ -0.76
SND1-202ENST00000461056 RBM17Q96I25 401 aaKnown RBP10.3□□□□□ -0.76
SND1-202ENST00000461056 C9orf78Q9NZ63 289 aaPredicted RBP10.3□□□□□ -0.76
SND1-202ENST00000461056 WWC3Q9ULE0 1092 aa10.3□□□□□ -0.76
SND1-202ENST00000461056 ATP6V0A2Q9Y487 856 aa10.3□□□□□ -0.76
SND1-202ENST00000461056 ARFGEF1Q9Y6D6 1849 aa10.3□□□□□ -0.76
SND1-202ENST00000461056 COL4A5P29400 1685 aa10.29□□□□□ -0.76
SND1-202ENST00000461056 PPEF1O14829 653 aaPredicted RBP10.29□□□□□ -0.76
SND1-202ENST00000461056 BBOX1O75936 387 aa10.29□□□□□ -0.76
SND1-202ENST00000461056 ALDH1B1P30837 517 aa10.29□□□□□ -0.76
SND1-202ENST00000461056 MVPQ14764 893 aaKnown RBP10.29□□□□□ -0.76
SND1-202ENST00000461056 DDX46Q7L014 1031 aaKnown RBP10.29□□□□□ -0.76
SND1-202ENST00000461056 RPGRQ92834 1020 aaKnown RBP10.29□□□□□ -0.76
SND1-202ENST00000461056 RTFDC1Q9BY42 306 aaPredicted RBP10.29□□□□□ -0.76
SND1-202ENST00000461056 BCS1LQ9Y276 419 aa10.29□□□□□ -0.76
SND1-202ENST00000461056 IRS2Q9Y4H2 1338 aa10.29□□□□□ -0.76
SND1-202ENST00000461056 C21orf2O43822 256 aa10.28□□□□□ -0.76
SND1-202ENST00000461056 UBTFL1P0CB47 393 aaPredicted RBP10.28□□□□□ -0.76
SND1-202ENST00000461056 ITGA6P23229 1130 aa10.28□□□□□ -0.76
SND1-202ENST00000461056 RPS8P62241 208 aaKnown RBP10.28□□□□□ -0.76
SND1-202ENST00000461056 SP8Q8IXZ3 490 aa10.28□□□□□ -0.76
SND1-202ENST00000461056 CCDC85AQ96PX6 553 aaPredicted RBP10.28□□□□□ -0.76
SND1-202ENST00000461056 ZBTB40Q9NUA8 1239 aa10.28□□□□□ -0.76
SND1-202ENST00000461056 LRRFIP2Q9Y608 721 aaKnown RBP10.28□□□□□ -0.76
SND1-202ENST00000461056 GRIN3BO60391 1043 aa10.27□□□□□ -0.77
SND1-202ENST00000461056 GNAI3P08754 354 aa10.27□□□□□ -0.77
SND1-202ENST00000461056 TMC4Q7Z404 712 aa10.27□□□□□ -0.77
SND1-202ENST00000461056 FTSJ3Q8IY81 847 aaKnown RBP10.27□□□□□ -0.77
SND1-202ENST00000461056 PSMD1Q99460 953 aa10.27□□□□□ -0.77
SND1-202ENST00000461056 BSDC1Q9NW68 430 aaPredicted RBP10.27□□□□□ -0.77
SND1-202ENST00000461056 PODXL2Q9NZ53 605 aa10.27□□□□□ -0.77
SND1-202ENST00000461056 RASSF7Q02833 373 aa10.26□□□□□ -0.77
SND1-202ENST00000461056 PTPN12Q05209 780 aaKnown RBP10.26□□□□□ -0.77
SND1-202ENST00000461056 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
SND1-202ENST00000461056 GPR162Q16538 588 aa10.26□□□□□ -0.77
SND1-202ENST00000461056 CCDC93Q567U6 631 aa10.26□□□□□ -0.77
SND1-202ENST00000461056 SOGA3Q5TF21 947 aa10.26□□□□□ -0.77
SND1-202ENST00000461056 CC2D2BQ6DHV5 1058 aa10.26□□□□□ -0.77
SND1-202ENST00000461056 ITPRIPQ8IWB1 547 aa10.26□□□□□ -0.77
SND1-202ENST00000461056 SIRT2Q8IXJ6 389 aa10.26□□□□□ -0.77
SND1-202ENST00000461056 COG6Q9Y2V7 657 aa10.26□□□□□ -0.77
SND1-202ENST00000461056 FER1L6Q2WGJ9 1857 aa10.25□□□□□ -0.77
SND1-202ENST00000461056 WTIPA6NIX2 430 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms