RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-216ENST00000460957 TMC4Q7Z404 712 aa20.21■□□□□ 0.83
GGA1-216ENST00000460957 LINS1Q8NG48 757 aa20.21■□□□□ 0.83
GGA1-216ENST00000460957 JDP2Q8WYK2 163 aa20.21■□□□□ 0.83
GGA1-216ENST00000460957 F6X3S4 739 aa20.2■□□□□ 0.82
GGA1-216ENST00000460957 IARSP41252 1262 aaKnown RBP20.2■□□□□ 0.82
GGA1-216ENST00000460957 PRELPP51888 382 aa20.2■□□□□ 0.82
GGA1-216ENST00000460957 SUPT20HQ8NEM7 779 aa20.2■□□□□ 0.82
GGA1-216ENST00000460957 PSMD1Q99460 953 aa20.2■□□□□ 0.82
GGA1-216ENST00000460957 CDHR2Q9BYE9 1310 aa20.2■□□□□ 0.82
GGA1-216ENST00000460957 DPP8Q6V1X1 898 aaPredicted RBP20.19■□□□□ 0.82
GGA1-216ENST00000460957 UBE3BQ7Z3V4 1068 aa20.19■□□□□ 0.82
GGA1-216ENST00000460957 SP8Q8IXZ3 490 aa20.19■□□□□ 0.82
GGA1-216ENST00000460957 CCDC85AQ96PX6 553 aaPredicted RBP20.19■□□□□ 0.82
GGA1-216ENST00000460957 TAF1P21675 1872 aa20.18■□□□□ 0.82
GGA1-216ENST00000460957 GLTPD2A6NH11 291 aa20.18■□□□□ 0.82
GGA1-216ENST00000460957 GCKRQ14397 625 aa20.18■□□□□ 0.82
GGA1-216ENST00000460957 MPNDQ8N594 471 aa20.18■□□□□ 0.82
GGA1-216ENST00000460957 NMRK2Q9NPI5 230 aa20.18■□□□□ 0.82
GGA1-216ENST00000460957 SMC4Q9NTJ3 1288 aa20.18■□□□□ 0.82
GGA1-216ENST00000460957 CT47B1P0C2W7 299 aaPredicted RBP20.17■□□□□ 0.82
GGA1-216ENST00000460957 LARGE2Q8N3Y3 721 aa20.17■□□□□ 0.82
GGA1-216ENST00000460957 BCL2L13Q9BXK5 485 aa20.17■□□□□ 0.82
GGA1-216ENST00000460957 RRAGCQ9HB90 399 aa20.17■□□□□ 0.82
GGA1-216ENST00000460957 MYH3P11055 1940 aa20.17■□□□□ 0.82
GGA1-216ENST00000460957 CTSWP56202 376 aa20.16■□□□□ 0.82
GGA1-216ENST00000460957 C1QTNF8P60827 252 aa20.16■□□□□ 0.82
GGA1-216ENST00000460957 RPS8P62241 208 aaKnown RBP20.16■□□□□ 0.82
GGA1-216ENST00000460957 ALDH1L2Q3SY69 923 aa20.16■□□□□ 0.82
GGA1-216ENST00000460957 MRPL50Q8N5N7 158 aaKnown RBP20.16■□□□□ 0.82
GGA1-216ENST00000460957 CELF1Q92879 486 aaKnown RBP20.16■□□□□ 0.82
GGA1-216ENST00000460957 PPIP5K2O43314 1243 aa20.15■□□□□ 0.82
GGA1-216ENST00000460957 ANKRD18AQ8IVF6 992 aa20.15■□□□□ 0.82
GGA1-216ENST00000460957 SSH1Q8WYL5 1049 aa20.15■□□□□ 0.82
GGA1-216ENST00000460957 CDC5LQ99459 802 aaKnown RBP20.15■□□□□ 0.82
GGA1-216ENST00000460957 SRCIN1Q9C0H9 1055 aa20.15■□□□□ 0.82
GGA1-216ENST00000460957 C9orf78Q9NZ63 289 aaPredicted RBP20.15■□□□□ 0.82
GGA1-216ENST00000460957 PTPRCP08575 1304 aa20.15■□□□□ 0.82
GGA1-216ENST00000460957 H7C1W4 665 aa20.14■□□□□ 0.81
GGA1-216ENST00000460957 EIF6P56537 245 aaKnown RBP20.14■□□□□ 0.81
GGA1-216ENST00000460957 NIM1KQ8IY84 436 aa20.14■□□□□ 0.81
GGA1-216ENST00000460957 TRMT2AQ8IZ69 625 aaKnown RBP20.14■□□□□ 0.81
GGA1-216ENST00000460957 SEC31BQ9NQW1 1179 aa20.14■□□□□ 0.81
GGA1-216ENST00000460957 NSFL1CQ9UNZ2 370 aaKnown RBP20.14■□□□□ 0.81
GGA1-216ENST00000460957 KIF3CO14782 793 aa20.13■□□□□ 0.81
GGA1-216ENST00000460957 VEGFAP15692 232 aaPredicted RBP20.13■□□□□ 0.81
GGA1-216ENST00000460957 BEND3Q5T5X7 828 aa20.13■□□□□ 0.81
GGA1-216ENST00000460957 CHMP3Q9Y3E7 222 aa20.13■□□□□ 0.81
GGA1-216ENST00000460957 C6orf229H3BNL8 230 aa20.12■□□□□ 0.81
GGA1-216ENST00000460957 ALDH1L1O75891 902 aa20.12■□□□□ 0.81
GGA1-216ENST00000460957 AOC3Q16853 763 aa20.12■□□□□ 0.81
GGA1-216ENST00000460957 VPS33BQ9H267 617 aa20.12■□□□□ 0.81
GGA1-216ENST00000460957 ANKIB1Q9P2G1 1089 aa20.12■□□□□ 0.81
GGA1-216ENST00000460957 DDNO94850 711 aaPredicted RBP20.11■□□□□ 0.81
GGA1-216ENST00000460957 SLC51AQ86UW1 340 aa20.11■□□□□ 0.81
GGA1-216ENST00000460957 TTLL11Q8NHH1 800 aa20.11■□□□□ 0.81
GGA1-216ENST00000460957 G3V3G9 751 aa20.1■□□□□ 0.81
GGA1-216ENST00000460957 GRM8O00222 908 aa20.1■□□□□ 0.81
GGA1-216ENST00000460957 TOMM70O94826 608 aa20.1■□□□□ 0.81
GGA1-216ENST00000460957 IGHMBP2P38935 993 aaKnown RBP20.1■□□□□ 0.81
GGA1-216ENST00000460957 DCAF8Q5TAQ9 597 aa20.1■□□□□ 0.81
GGA1-216ENST00000460957 EYA3Q99504 573 aa20.1■□□□□ 0.81
GGA1-216ENST00000460957 GJA3Q9Y6H8 435 aa20.1■□□□□ 0.81
GGA1-216ENST00000460957 SNED1Q8TER0 1413 aa20.1■□□□□ 0.81
GGA1-216ENST00000460957 MPHOSPH8Q99549 860 aa20.09■□□□□ 0.81
GGA1-216ENST00000460957 PLA2G12BQ9BX93 195 aa20.09■□□□□ 0.81
GGA1-216ENST00000460957 GREM2Q9H772 168 aa20.09■□□□□ 0.81
GGA1-216ENST00000460957 SPEF2Q9C093 1822 aa20.09■□□□□ 0.81
GGA1-216ENST00000460957 ZNF541Q9H0D2 1346 aa20.08■□□□□ 0.81
GGA1-216ENST00000460957 LRRC37AA6NMS7 1700 aa20.08■□□□□ 0.81
GGA1-216ENST00000460957 IQCA1LA6NCM1 817 aa20.08■□□□□ 0.81
GGA1-216ENST00000460957 GPSM2P81274 684 aa20.08■□□□□ 0.81
GGA1-216ENST00000460957 WASHC4Q2M389 1173 aa20.08■□□□□ 0.81
GGA1-216ENST00000460957 RTFDC1Q9BY42 306 aaPredicted RBP20.08■□□□□ 0.81
GGA1-216ENST00000460957 ANKRD18BA2A2Z9 1011 aa20.07■□□□□ 0.8
GGA1-216ENST00000460957 FZD9O00144 591 aa20.07■□□□□ 0.8
GGA1-216ENST00000460957 ITGA6P23229 1130 aa20.07■□□□□ 0.8
GGA1-216ENST00000460957 TAF7LQ5H9L4 462 aa20.07■□□□□ 0.8
GGA1-216ENST00000460957 GGA1Q9UJY5 639 aa20.07■□□□□ 0.8
GGA1-216ENST00000460957 WDR90Q96KV7 1748 aa20.07■□□□□ 0.8
GGA1-216ENST00000460957 RIMBP2O15034 1052 aa20.06■□□□□ 0.8
GGA1-216ENST00000460957 UFL1O94874 794 aa20.06■□□□□ 0.8
GGA1-216ENST00000460957 LMOD1P29536 600 aaPredicted RBP20.06■□□□□ 0.8
GGA1-216ENST00000460957 CASP7P55210 303 aa20.06■□□□□ 0.8
GGA1-216ENST00000460957 KIAA2012Q0VF49 1180 aa20.06■□□□□ 0.8
GGA1-216ENST00000460957 FAM161AQ3B820 660 aa20.06■□□□□ 0.8
GGA1-216ENST00000460957 API5Q9BZZ5 524 aaKnown RBP20.06■□□□□ 0.8
GGA1-216ENST00000460957 NOB1Q9ULX3 412 aaKnown RBP20.06■□□□□ 0.8
GGA1-216ENST00000460957 RTL9Q8NET4 1388 aa20.06■□□□□ 0.8
GGA1-216ENST00000460957 KIF16BQ96L93 1317 aa20.05■□□□□ 0.8
GGA1-216ENST00000460957 IFIT5Q13325 482 aaKnown RBP20.05■□□□□ 0.8
GGA1-216ENST00000460957 GPC2Q8N158 579 aa20.05■□□□□ 0.8
GGA1-216ENST00000460957 RBM46Q8TBY0 533 aaKnown RBP20.05■□□□□ 0.8
GGA1-216ENST00000460957 ZC3H12CQ9C0D7 883 aaKnown RBP20.05■□□□□ 0.8
GGA1-216ENST00000460957 ZNRF3Q9ULT6 936 aa20.05■□□□□ 0.8
GGA1-216ENST00000460957 XDHP47989 1333 aa20.04■□□□□ 0.8
GGA1-216ENST00000460957 ZBED9Q6R2W3 1325 aa20.04■□□□□ 0.8
GGA1-216ENST00000460957 RARSP54136 660 aaKnown RBP20.04■□□□□ 0.8
GGA1-216ENST00000460957 CCDC57Q2TAC2 916 aa20.04■□□□□ 0.8
GGA1-216ENST00000460957 BSDC1Q9NW68 430 aaPredicted RBP20.04■□□□□ 0.8
GGA1-216ENST00000460957 COL4A1P02462 1669 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms