RNA–Protein interactions for RNA: ENST00000460326.5

NUP58-205, Transcript of nucleoporin 58, humanhuman

TSL 2

Gene NUP58, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-205ENST00000460326 SOGA3Q5TF21 947 aa17.94■□□□□ 0.46
NUP58-205ENST00000460326 DDX46Q7L014 1031 aaKnown RBP17.94■□□□□ 0.46
NUP58-205ENST00000460326 UBE3BQ7Z3V4 1068 aa17.94■□□□□ 0.46
NUP58-205ENST00000460326 GRAPLQ8TC17 118 aaPredicted RBP17.94■□□□□ 0.46
NUP58-205ENST00000460326 CCDC85AQ96PX6 553 aaPredicted RBP17.94■□□□□ 0.46
NUP58-205ENST00000460326 TAOK3Q9H2K8 898 aa17.94■□□□□ 0.46
NUP58-205ENST00000460326 BBOX1O75936 387 aa17.93■□□□□ 0.46
NUP58-205ENST00000460326 FKBP4Q02790 459 aaKnown RBP eCLIP17.93■□□□□ 0.46
NUP58-205ENST00000460326 ATP6V0A2Q9Y487 856 aa17.93■□□□□ 0.46
NUP58-205ENST00000460326 LRRC37AA6NMS7 1700 aa17.92■□□□□ 0.46
NUP58-205ENST00000460326 RARSP54136 660 aaKnown RBP17.92■□□□□ 0.46
NUP58-205ENST00000460326 SLC4A10Q6U841 1118 aa17.92■□□□□ 0.46
NUP58-205ENST00000460326 RTKN2Q8IZC4 609 aa17.92■□□□□ 0.46
NUP58-205ENST00000460326 TTLL11Q8NHH1 800 aa17.92■□□□□ 0.46
NUP58-205ENST00000460326 ZNF277Q9NRM2 450 aaPredicted RBP17.92■□□□□ 0.46
NUP58-205ENST00000460326 SPEF2Q9C093 1822 aa17.92■□□□□ 0.46
NUP58-205ENST00000460326 COL4A5P29400 1685 aa17.92■□□□□ 0.46
NUP58-205ENST00000460326 CT47B1P0C2W7 299 aaPredicted RBP17.91■□□□□ 0.46
NUP58-205ENST00000460326 SP8Q8IXZ3 490 aa17.91■□□□□ 0.46
NUP58-205ENST00000460326 SMC4Q9NTJ3 1288 aa17.91■□□□□ 0.46
NUP58-205ENST00000460326 ZBED9Q6R2W3 1325 aa17.91■□□□□ 0.46
NUP58-205ENST00000460326 CTSWP56202 376 aa17.9■□□□□ 0.46
NUP58-205ENST00000460326 CC2D2BQ6DHV5 1058 aa17.9■□□□□ 0.46
NUP58-205ENST00000460326 NOB1Q9ULX3 412 aaKnown RBP17.9■□□□□ 0.46
NUP58-205ENST00000460326 PTPRCP08575 1304 aa17.9■□□□□ 0.46
NUP58-205ENST00000460326 BRPF1P55201 1214 aaPredicted RBP17.89■□□□□ 0.45
NUP58-205ENST00000460326 RPS8P62241 208 aaKnown RBP17.89■□□□□ 0.45
NUP58-205ENST00000460326 FOXO4P98177 505 aa17.89■□□□□ 0.45
NUP58-205ENST00000460326 EPHA10Q5JZY3 1008 aa17.89■□□□□ 0.45
NUP58-205ENST00000460326 PSMD1Q99460 953 aa17.89■□□□□ 0.45
NUP58-205ENST00000460326 PLA2G12BQ9BX93 195 aa17.89■□□□□ 0.45
NUP58-205ENST00000460326 GREM2Q9H772 168 aa17.89■□□□□ 0.45
NUP58-205ENST00000460326 DUOX1Q9NRD9 1551 aa17.88■□□□□ 0.45
NUP58-205ENST00000460326 BCAR3O75815 825 aa17.88■□□□□ 0.45
NUP58-205ENST00000460326 ALDH1L1O75891 902 aa17.88■□□□□ 0.45
NUP58-205ENST00000460326 CSF1RP07333 972 aa17.88■□□□□ 0.45
NUP58-205ENST00000460326 CCDC152Q4G0S7 254 aa17.88■□□□□ 0.45
NUP58-205ENST00000460326 SRCIN1Q9C0H9 1055 aa17.88■□□□□ 0.45
NUP58-205ENST00000460326 NMRK2Q9NPI5 230 aa17.88■□□□□ 0.45
NUP58-205ENST00000460326 LTBP1Q14766 1721 aa17.88■□□□□ 0.45
NUP58-205ENST00000460326 IARSP41252 1262 aaKnown RBP17.87■□□□□ 0.45
NUP58-205ENST00000460326 KAZALD1Q96I82 304 aa17.87■□□□□ 0.45
NUP58-205ENST00000460326 GPBP1L1Q9HC44 474 aaPredicted RBP17.87■□□□□ 0.45
NUP58-205ENST00000460326 TNNQ9UQP3 1299 aa17.87■□□□□ 0.45
NUP58-205ENST00000460326 GRM8O00222 908 aa17.86■□□□□ 0.45
NUP58-205ENST00000460326 KIF3CO14782 793 aa17.86■□□□□ 0.45
NUP58-205ENST00000460326 NBPF7P0C2Y1 421 aaPredicted RBP17.86■□□□□ 0.45
NUP58-205ENST00000460326 HSP90B1P14625 803 aaKnown RBP17.86■□□□□ 0.45
NUP58-205ENST00000460326 RTFDC1Q9BY42 306 aaPredicted RBP17.86■□□□□ 0.45
NUP58-205ENST00000460326 GLTPD2A6NH11 291 aa17.85■□□□□ 0.45
NUP58-205ENST00000460326 GPSM2P81274 684 aa17.85■□□□□ 0.45
NUP58-205ENST00000460326 MPNDQ8N594 471 aa17.85■□□□□ 0.45
NUP58-205ENST00000460326 RTL9Q8NET4 1388 aa17.84■□□□□ 0.45
NUP58-205ENST00000460326 UTYO14607 1347 aa17.84■□□□□ 0.45
NUP58-205ENST00000460326 ZC3H4Q9UPT8 1303 aaKnown RBP17.84■□□□□ 0.45
NUP58-205ENST00000460326 WTIPA6NIX2 430 aaPredicted RBP17.84■□□□□ 0.45
NUP58-205ENST00000460326 POTECB2RU33 542 aa17.84■□□□□ 0.45
NUP58-205ENST00000460326 FAM161AQ3B820 660 aa17.84■□□□□ 0.45
NUP58-205ENST00000460326 GRIPAP1Q4V328 841 aa17.84■□□□□ 0.45
NUP58-205ENST00000460326 DPP8Q6V1X1 898 aaPredicted RBP17.84■□□□□ 0.45
NUP58-205ENST00000460326 TMC4Q7Z404 712 aa17.84■□□□□ 0.45
NUP58-205ENST00000460326 SUCLG2Q96I99 432 aa17.84■□□□□ 0.45
NUP58-205ENST00000460326 RRAGCQ9HB90 399 aa17.84■□□□□ 0.45
NUP58-205ENST00000460326 POLLQ9UGP5 575 aa17.84■□□□□ 0.45
NUP58-205ENST00000460326 ZNF541Q9H0D2 1346 aa17.83■□□□□ 0.44
NUP58-205ENST00000460326 FZD9O00144 591 aa17.83■□□□□ 0.44
NUP58-205ENST00000460326 DDNO94850 711 aaPredicted RBP17.83■□□□□ 0.44
NUP58-205ENST00000460326 AOC3Q16853 763 aa17.83■□□□□ 0.44
NUP58-205ENST00000460326 GPR101Q96P66 508 aaPredicted RBP17.83■□□□□ 0.44
NUP58-205ENST00000460326 USP44Q9H0E7 712 aa17.83■□□□□ 0.44
NUP58-205ENST00000460326 C9orf78Q9NZ63 289 aaPredicted RBP17.83■□□□□ 0.44
NUP58-205ENST00000460326 WDR90Q96KV7 1748 aa17.82■□□□□ 0.44
NUP58-205ENST00000460326 ITGA6P23229 1130 aa17.82■□□□□ 0.44
NUP58-205ENST00000460326 LMBR1LQ6UX01 489 aa17.82■□□□□ 0.44
NUP58-205ENST00000460326 ANKRD18AQ8IVF6 992 aa17.82■□□□□ 0.44
NUP58-205ENST00000460326 NSFL1CQ9UNZ2 370 aaKnown RBP17.82■□□□□ 0.44
NUP58-205ENST00000460326 KDM2BQ8NHM5 1336 aa17.8■□□□□ 0.44
NUP58-205ENST00000460326 PPIP5K2O43314 1243 aa17.8■□□□□ 0.44
NUP58-205ENST00000460326 LARGE2Q8N3Y3 721 aa17.8■□□□□ 0.44
NUP58-205ENST00000460326 TBC1D16Q8TBP0 767 aa17.8■□□□□ 0.44
NUP58-205ENST00000460326 TMX4Q9H1E5 349 aaPredicted RBP17.8■□□□□ 0.44
NUP58-205ENST00000460326 MINPP1Q9UNW1 487 aa17.8■□□□□ 0.44
NUP58-205ENST00000460326 A0A1B0GUL6 1792 aa17.8■□□□□ 0.44
NUP58-205ENST00000460326 KIAA2012Q0VF49 1180 aa17.79■□□□□ 0.44
NUP58-205ENST00000460326 ARHGAP45Q92619 1136 aa17.79■□□□□ 0.44
NUP58-205ENST00000460326 ZNF594Q96JF6 807 aaPredicted RBP17.79■□□□□ 0.44
NUP58-205ENST00000460326 CDC5LQ99459 802 aaKnown RBP17.79■□□□□ 0.44
NUP58-205ENST00000460326 API5Q9BZZ5 524 aaKnown RBP17.79■□□□□ 0.44
NUP58-205ENST00000460326 BSDC1Q9NW68 430 aaPredicted RBP17.79■□□□□ 0.44
NUP58-205ENST00000460326 PODXL2Q9NZ53 605 aa17.79■□□□□ 0.44
NUP58-205ENST00000460326 RIMBP2O15034 1052 aa17.78■□□□□ 0.44
NUP58-205ENST00000460326 TRIM27P14373 513 aa17.78■□□□□ 0.44
NUP58-205ENST00000460326 DPY19L2Q6NUT2 758 aa17.78■□□□□ 0.44
NUP58-205ENST00000460326 ANKRD44Q8N8A2 993 aa17.78■□□□□ 0.44
NUP58-205ENST00000460326 SUPT20HQ8NEM7 779 aa17.78■□□□□ 0.44
NUP58-205ENST00000460326 FRAT1Q92837 279 aaPredicted RBP17.78■□□□□ 0.44
NUP58-205ENST00000460326 VPS33BQ9H267 617 aa17.78■□□□□ 0.44
NUP58-205ENST00000460326 BICC1Q9H694 974 aaKnown RBP17.78■□□□□ 0.44
NUP58-205ENST00000460326 KIF16BQ96L93 1317 aa17.77■□□□□ 0.44
NUP58-205ENST00000460326 SCN9AQ15858 1988 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms