RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 FAM161AQ3B820 660 aa12.97□□□□□ -0.33
NEDD9-205ENST00000459670 C3orf67Q6ZVT6 689 aa12.97□□□□□ -0.33
NEDD9-205ENST00000459670 PLEKHM2Q8IWE5 1019 aa12.97□□□□□ -0.33
NEDD9-205ENST00000459670 OTUD7AQ8TE49 926 aaPredicted RBP12.97□□□□□ -0.33
NEDD9-205ENST00000459670 OSBPL3Q9H4L5 887 aa12.97□□□□□ -0.33
NEDD9-205ENST00000459670 TRMT112Q9UI30 125 aaKnown RBP12.97□□□□□ -0.33
NEDD9-205ENST00000459670 DOCK2Q92608 1830 aa12.97□□□□□ -0.33
NEDD9-205ENST00000459670 MYH7P12883 1935 aa12.96□□□□□ -0.33
NEDD9-205ENST00000459670 SMARCA5O60264 1052 aaPredicted RBP12.96□□□□□ -0.33
NEDD9-205ENST00000459670 RTL5Q5HYW3 569 aaPredicted RBP12.96□□□□□ -0.33
NEDD9-205ENST00000459670 ANKRD45Q5TZF3 282 aa12.96□□□□□ -0.33
NEDD9-205ENST00000459670 DEFB132Q7Z7B7 95 aa12.96□□□□□ -0.33
NEDD9-205ENST00000459670 KLHDC4Q8TBB5 520 aa12.96□□□□□ -0.33
NEDD9-205ENST00000459670 RHPN1Q8TCX5 695 aa12.96□□□□□ -0.33
NEDD9-205ENST00000459670 FBXO3Q9UK99 471 aa12.96□□□□□ -0.33
NEDD9-205ENST00000459670 POLRMTO00411 1230 aaKnown RBP12.95□□□□□ -0.34
NEDD9-205ENST00000459670 ZPR1O75312 459 aa12.95□□□□□ -0.34
NEDD9-205ENST00000459670 CIAO1O76071 339 aa12.95□□□□□ -0.34
NEDD9-205ENST00000459670 RFC4P35249 363 aa12.95□□□□□ -0.34
NEDD9-205ENST00000459670 SF3B3Q15393 1217 aaKnown RBP12.95□□□□□ -0.34
NEDD9-205ENST00000459670 SLC15A2Q16348 729 aa12.95□□□□□ -0.34
NEDD9-205ENST00000459670 ERFEQ4G0M1 354 aa12.95□□□□□ -0.34
NEDD9-205ENST00000459670 NPM2Q86SE8 214 aaKnown RBP12.95□□□□□ -0.34
NEDD9-205ENST00000459670 NUTM1Q86Y26 1132 aa12.95□□□□□ -0.34
NEDD9-205ENST00000459670 CCDC125Q86Z20 511 aa12.95□□□□□ -0.34
NEDD9-205ENST00000459670 KIF1BPQ96EK5 621 aa12.95□□□□□ -0.34
NEDD9-205ENST00000459670 LRRCC1Q9C099 1032 aa12.95□□□□□ -0.34
NEDD9-205ENST00000459670 GREM2Q9H772 168 aa12.95□□□□□ -0.34
NEDD9-205ENST00000459670 STAP2Q9UGK3 403 aa12.95□□□□□ -0.34
NEDD9-205ENST00000459670 ZNF646O15015 1829 aaPredicted RBP12.95□□□□□ -0.34
NEDD9-205ENST00000459670 MYH13Q9UKX3 1938 aa12.94□□□□□ -0.34
NEDD9-205ENST00000459670 MYO5AQ9Y4I1 1855 aaKnown RBP12.94□□□□□ -0.34
NEDD9-205ENST00000459670 SURF6O75683 361 aaKnown RBP12.94□□□□□ -0.34
NEDD9-205ENST00000459670 BAG6P46379 1132 aa12.94□□□□□ -0.34
NEDD9-205ENST00000459670 C8orf34Q49A92 452 aa12.94□□□□□ -0.34
NEDD9-205ENST00000459670 HSP90AB4PQ58FF6 505 aa12.94□□□□□ -0.34
NEDD9-205ENST00000459670 C16orf71Q8IYS4 520 aaPredicted RBP12.94□□□□□ -0.34
NEDD9-205ENST00000459670 VGLL2Q8N8G2 317 aa12.94□□□□□ -0.34
NEDD9-205ENST00000459670 FLAD1Q8NFF5 587 aa12.94□□□□□ -0.34
NEDD9-205ENST00000459670 AOX1Q06278 1338 aa12.93□□□□□ -0.34
NEDD9-205ENST00000459670 KLRG2A4D1S0 409 aaPredicted RBP12.93□□□□□ -0.34
NEDD9-205ENST00000459670 HCLS1P14317 486 aaPredicted RBP12.93□□□□□ -0.34
NEDD9-205ENST00000459670 GSPT1P15170 499 aaKnown RBP12.93□□□□□ -0.34
NEDD9-205ENST00000459670 RGS3P49796 1198 aa12.93□□□□□ -0.34
NEDD9-205ENST00000459670 PRR5LQ6MZQ0 368 aa12.93□□□□□ -0.34
NEDD9-205ENST00000459670 ARXQ96QS3 562 aa12.93□□□□□ -0.34
NEDD9-205ENST00000459670 NYXQ9GZU5 481 aa12.93□□□□□ -0.34
NEDD9-205ENST00000459670 EYA2O00167 538 aa12.92□□□□□ -0.34
NEDD9-205ENST00000459670 ITGA6P23229 1130 aa12.92□□□□□ -0.34
NEDD9-205ENST00000459670 PDE1AP54750 535 aa12.92□□□□□ -0.34
NEDD9-205ENST00000459670 CRY2Q49AN0 593 aa12.92□□□□□ -0.34
NEDD9-205ENST00000459670 LRRC24Q50LG9 513 aa12.92□□□□□ -0.34
NEDD9-205ENST00000459670 BMP2KLQ5H9B9 411 aa12.92□□□□□ -0.34
NEDD9-205ENST00000459670 ERC1Q8IUD2 1116 aa12.92□□□□□ -0.34
NEDD9-205ENST00000459670 PI4K2BQ8TCG2 481 aa12.92□□□□□ -0.34
NEDD9-205ENST00000459670 ZNF594Q96JF6 807 aaPredicted RBP12.92□□□□□ -0.34
NEDD9-205ENST00000459670 SETDB2Q96T68 719 aa12.92□□□□□ -0.34
NEDD9-205ENST00000459670 PUS3Q9BZE2 481 aaKnown RBP12.92□□□□□ -0.34
NEDD9-205ENST00000459670 GPR108Q9NPR9 543 aa12.92□□□□□ -0.34
NEDD9-205ENST00000459670 DUOX1Q9NRD9 1551 aa12.92□□□□□ -0.34
NEDD9-205ENST00000459670 RIPOR2Q9Y4F9 1068 aa12.92□□□□□ -0.34
NEDD9-205ENST00000459670 C10orf71Q711Q0 1435 aa12.91□□□□□ -0.34
NEDD9-205ENST00000459670 EAF2Q96CJ1 260 aaPredicted RBP12.91□□□□□ -0.34
NEDD9-205ENST00000459670 TFCP2L1Q9NZI6 479 aa12.91□□□□□ -0.34
NEDD9-205ENST00000459670 SNED1Q8TER0 1413 aa12.9□□□□□ -0.34
NEDD9-205ENST00000459670 IL15P40933 162 aaPredicted RBP12.9□□□□□ -0.34
NEDD9-205ENST00000459670 TTC22Q5TAA0 569 aa12.9□□□□□ -0.34
NEDD9-205ENST00000459670 UPF1Q92900 1129 aaKnown RBP eCLIP12.9□□□□□ -0.34
NEDD9-205ENST00000459670 IL1RAPL2Q9NP60 686 aa12.9□□□□□ -0.34
NEDD9-205ENST00000459670 MX1P20591 662 aa12.89□□□□□ -0.35
NEDD9-205ENST00000459670 IFIT5Q13325 482 aaKnown RBP12.89□□□□□ -0.35
NEDD9-205ENST00000459670 BICDL1Q6ZP65 573 aa12.89□□□□□ -0.35
NEDD9-205ENST00000459670 NBPF5PQ86XG9 351 aaPredicted RBP12.89□□□□□ -0.35
NEDD9-205ENST00000459670 BACH2Q9BYV9 841 aa12.89□□□□□ -0.35
NEDD9-205ENST00000459670 SIL1Q9H173 461 aa12.89□□□□□ -0.35
NEDD9-205ENST00000459670 SEC31BQ9NQW1 1179 aa12.89□□□□□ -0.35
NEDD9-205ENST00000459670 TLR7Q9NYK1 1049 aaKnown RBP12.89□□□□□ -0.35
NEDD9-205ENST00000459670 FAM177BA6PVY3 158 aa12.88□□□□□ -0.35
NEDD9-205ENST00000459670 SERPINB2P05120 415 aa12.88□□□□□ -0.35
NEDD9-205ENST00000459670 HSP90B1P14625 803 aaKnown RBP12.88□□□□□ -0.35
NEDD9-205ENST00000459670 FGFR2P21802 821 aa12.88□□□□□ -0.35
NEDD9-205ENST00000459670 TFCP2Q12800 502 aa12.88□□□□□ -0.35
NEDD9-205ENST00000459670 G3BP1Q13283 466 aaKnown RBP eCLIP12.88□□□□□ -0.35
NEDD9-205ENST00000459670 CCDC57Q2TAC2 916 aa12.88□□□□□ -0.35
NEDD9-205ENST00000459670 CCDC152Q4G0S7 254 aa12.88□□□□□ -0.35
NEDD9-205ENST00000459670 TNNI3KQ59H18 835 aa12.88□□□□□ -0.35
NEDD9-205ENST00000459670 TPTE2Q6XPS3 522 aa12.88□□□□□ -0.35
NEDD9-205ENST00000459670 NLGN1Q8N2Q7 840 aa12.88□□□□□ -0.35
NEDD9-205ENST00000459670 CNBD1Q8NA66 436 aa12.88□□□□□ -0.35
NEDD9-205ENST00000459670 PDGFDQ9GZP0 370 aaPredicted RBP12.88□□□□□ -0.35
NEDD9-205ENST00000459670 STK32BQ9NY57 414 aa12.88□□□□□ -0.35
NEDD9-205ENST00000459670 DBNLQ9UJU6 430 aaKnown RBP12.88□□□□□ -0.35
NEDD9-205ENST00000459670 FPGT-TNNI3KV9GXZ4 949 aa12.88□□□□□ -0.35
NEDD9-205ENST00000459670 SLX4Q8IY92 1834 aa12.88□□□□□ -0.35
NEDD9-205ENST00000459670 TTC41PQ6P2S7 1318 aa12.88□□□□□ -0.35
NEDD9-205ENST00000459670 IRS2Q9Y4H2 1338 aa12.88□□□□□ -0.35
NEDD9-205ENST00000459670 MAST2Q6P0Q8 1798 aa12.87□□□□□ -0.35
NEDD9-205ENST00000459670 ANKRD18BA2A2Z9 1011 aa12.87□□□□□ -0.35
NEDD9-205ENST00000459670 APBB1O00213 710 aa12.87□□□□□ -0.35
NEDD9-205ENST00000459670 CCDC85AQ96PX6 553 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms