RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 GLYCTKQ8IVS8 523 aa5.65□□□□□ -1.5
SCARNA18-201ENST00000459004 EDEM1Q92611 657 aa5.65□□□□□ -1.5
SCARNA18-201ENST00000459004 BTBD6Q96KE9 485 aa5.65□□□□□ -1.5
SCARNA18-201ENST00000459004 PATL2C9JE40 543 aaKnown RBP5.64□□□□□ -1.51
SCARNA18-201ENST00000459004 H3BRB1 525 aa5.64□□□□□ -1.51
SCARNA18-201ENST00000459004 MAP3K6O95382 1288 aa5.64□□□□□ -1.51
SCARNA18-201ENST00000459004 RARAP10276 462 aa5.64□□□□□ -1.51
SCARNA18-201ENST00000459004 MZF1P28698 734 aaPredicted RBP5.64□□□□□ -1.51
SCARNA18-201ENST00000459004 MARSP56192 900 aaKnown RBP5.64□□□□□ -1.51
SCARNA18-201ENST00000459004 DNM1Q05193 864 aaKnown RBP5.64□□□□□ -1.51
SCARNA18-201ENST00000459004 NLRP13Q86W25 1043 aa5.64□□□□□ -1.51
SCARNA18-201ENST00000459004 NUDT16Q96DE0 195 aaKnown RBP5.64□□□□□ -1.51
SCARNA18-201ENST00000459004 MDFIQ99750 246 aa5.64□□□□□ -1.51
SCARNA18-201ENST00000459004 UBE2OQ9C0C9 1292 aaKnown RBP5.64□□□□□ -1.51
SCARNA18-201ENST00000459004 TUT1Q9H6E5 874 aaKnown RBP5.64□□□□□ -1.51
SCARNA18-201ENST00000459004 ZFATQ9P243 1243 aa5.64□□□□□ -1.51
SCARNA18-201ENST00000459004 PDGFAP04085 211 aa5.63□□□□□ -1.51
SCARNA18-201ENST00000459004 AMPD1P23109 780 aa5.63□□□□□ -1.51
SCARNA18-201ENST00000459004 TRIP4Q15650 581 aaPredicted RBP5.63□□□□□ -1.51
SCARNA18-201ENST00000459004 PCSK7Q16549 785 aa5.63□□□□□ -1.51
SCARNA18-201ENST00000459004 XKR5Q6UX68 686 aa5.63□□□□□ -1.51
SCARNA18-201ENST00000459004 CHSY3Q70JA7 882 aa5.63□□□□□ -1.51
SCARNA18-201ENST00000459004 DHX32Q7L7V1 743 aaKnown RBP5.63□□□□□ -1.51
SCARNA18-201ENST00000459004 TTC16Q8NEE8 873 aa5.63□□□□□ -1.51
SCARNA18-201ENST00000459004 IGFLR1Q9H665 355 aa5.63□□□□□ -1.51
SCARNA18-201ENST00000459004 POLIQ9UNA4 740 aa5.63□□□□□ -1.51
SCARNA18-201ENST00000459004 SOWAHDA6NJG2 315 aa5.62□□□□□ -1.51
SCARNA18-201ENST00000459004 FZD6O60353 706 aa5.62□□□□□ -1.51
SCARNA18-201ENST00000459004 PSAPP07602 524 aa5.62□□□□□ -1.51
SCARNA18-201ENST00000459004 ADH7P40394 386 aa5.62□□□□□ -1.51
SCARNA18-201ENST00000459004 USP5P45974 858 aa5.62□□□□□ -1.51
SCARNA18-201ENST00000459004 TBC1D8BQ0IIM8 1120 aa5.62□□□□□ -1.51
SCARNA18-201ENST00000459004 ECM1Q16610 540 aa5.62□□□□□ -1.51
SCARNA18-201ENST00000459004 PDE12Q6L8Q7 609 aaKnown RBP5.62□□□□□ -1.51
SCARNA18-201ENST00000459004 KANK3Q6NY19 840 aa5.62□□□□□ -1.51
SCARNA18-201ENST00000459004 GGNBP2Q9H3C7 697 aa5.62□□□□□ -1.51
SCARNA18-201ENST00000459004 DNAJB12Q9NXW2 375 aaKnown RBP5.62□□□□□ -1.51
SCARNA18-201ENST00000459004 TLR7Q9NYK1 1049 aaKnown RBP5.62□□□□□ -1.51
SCARNA18-201ENST00000459004 ZBTB42B2RXF5 422 aa5.61□□□□□ -1.51
SCARNA18-201ENST00000459004 MMP20O60882 483 aa5.61□□□□□ -1.51
SCARNA18-201ENST00000459004 PLAURQ03405 335 aa5.61□□□□□ -1.51
SCARNA18-201ENST00000459004 EHHADHQ08426 723 aa5.61□□□□□ -1.51
SCARNA18-201ENST00000459004 C8orf34Q49A92 452 aa5.61□□□□□ -1.51
SCARNA18-201ENST00000459004 TTC39BQ5VTQ0 682 aaPredicted RBP5.61□□□□□ -1.51
SCARNA18-201ENST00000459004 KCTD17Q8N5Z5 321 aa5.61□□□□□ -1.51
SCARNA18-201ENST00000459004 BEND7Q8N7W2 519 aaPredicted RBP5.61□□□□□ -1.51
SCARNA18-201ENST00000459004 TRPM4Q8TD43 1214 aa5.61□□□□□ -1.51
SCARNA18-201ENST00000459004 SCARF2Q96GP6 870 aaPredicted RBP5.61□□□□□ -1.51
SCARNA18-201ENST00000459004 RRAGCQ9HB90 399 aa5.61□□□□□ -1.51
SCARNA18-201ENST00000459004 CCDC87Q9NVE4 849 aa5.61□□□□□ -1.51
SCARNA18-201ENST00000459004 BRPF3Q9ULD4 1205 aa5.61□□□□□ -1.51
SCARNA18-201ENST00000459004 IVNS1ABPQ9Y6Y0 642 aa5.61□□□□□ -1.51
SCARNA18-201ENST00000459004 SOX18P35713 384 aa5.6□□□□□ -1.51
SCARNA18-201ENST00000459004 NRLP54845 237 aa5.6□□□□□ -1.51
SCARNA18-201ENST00000459004 GPLD1P80108 840 aa5.6□□□□□ -1.51
SCARNA18-201ENST00000459004 ARHGAP4P98171 946 aa5.6□□□□□ -1.51
SCARNA18-201ENST00000459004 ZNF438Q7Z4V0 828 aa5.6□□□□□ -1.51
SCARNA18-201ENST00000459004 PODNQ7Z5L7 613 aa5.6□□□□□ -1.51
SCARNA18-201ENST00000459004 ELP3Q9H9T3 547 aa5.6□□□□□ -1.51
SCARNA18-201ENST00000459004 ABI2Q9NYB9 513 aaPredicted RBP5.6□□□□□ -1.51
SCARNA18-201ENST00000459004 MKL2Q9ULH7 1088 aa5.6□□□□□ -1.51
SCARNA18-201ENST00000459004 SLC6A14Q9UN76 642 aa5.6□□□□□ -1.51
SCARNA18-201ENST00000459004 CNTNAP5Q8WYK1 1306 aa5.59□□□□□ -1.51
SCARNA18-201ENST00000459004 PHF20L1A8MW92 1017 aa5.59□□□□□ -1.51
SCARNA18-201ENST00000459004 NDUFB5O43674 189 aa5.59□□□□□ -1.51
SCARNA18-201ENST00000459004 HOXD8P13378 290 aaPredicted RBP5.59□□□□□ -1.51
SCARNA18-201ENST00000459004 HOXB4P17483 251 aaPredicted RBP5.59□□□□□ -1.51
SCARNA18-201ENST00000459004 SNRPNP63162 240 aaKnown RBP5.59□□□□□ -1.51
SCARNA18-201ENST00000459004 AEBP1Q8IUX7 1158 aa5.59□□□□□ -1.51
SCARNA18-201ENST00000459004 MICALL1Q8N3F8 863 aa5.59□□□□□ -1.51
SCARNA18-201ENST00000459004 OR13H1Q8NG92 308 aa5.59□□□□□ -1.51
SCARNA18-201ENST00000459004 TMEM63CQ9P1W3 806 aa5.59□□□□□ -1.51
SCARNA18-201ENST00000459004 STARD13Q9Y3M8 1113 aa5.59□□□□□ -1.51
SCARNA18-201ENST00000459004 LOC102724428A0A0B4J2F2 783 aa5.58□□□□□ -1.52
SCARNA18-201ENST00000459004 A6NHS1 94 aa5.58□□□□□ -1.52
SCARNA18-201ENST00000459004 PIK3R2O00459 728 aa5.58□□□□□ -1.52
SCARNA18-201ENST00000459004 DGKGP49619 791 aa5.58□□□□□ -1.52
SCARNA18-201ENST00000459004 SIK1P57059 783 aa5.58□□□□□ -1.52
SCARNA18-201ENST00000459004 LINC00114Q6XXX2 140 aa5.58□□□□□ -1.52
SCARNA18-201ENST00000459004 C20orf204Q6ZNR8 217 aa5.58□□□□□ -1.52
SCARNA18-201ENST00000459004 FAM35AQ86V20 835 aa5.58□□□□□ -1.52
SCARNA18-201ENST00000459004 GJD3Q8N144 294 aa5.58□□□□□ -1.52
SCARNA18-201ENST00000459004 PMEPA1Q969W9 287 aa5.58□□□□□ -1.52
SCARNA18-201ENST00000459004 CITED4Q96RK1 184 aa5.58□□□□□ -1.52
SCARNA18-201ENST00000459004 FRRS1LQ9P0K9 344 aa5.58□□□□□ -1.52
SCARNA18-201ENST00000459004 BIN2Q9UBW5 565 aaPredicted RBP5.58□□□□□ -1.52
SCARNA18-201ENST00000459004 RNF225M0QZC1 329 aaPredicted RBP5.57□□□□□ -1.52
SCARNA18-201ENST00000459004 M0R082 166 aa5.57□□□□□ -1.52
SCARNA18-201ENST00000459004 ALBP02768 609 aa5.57□□□□□ -1.52
SCARNA18-201ENST00000459004 CPB1P15086 417 aa5.57□□□□□ -1.52
SCARNA18-201ENST00000459004 MLLT1Q03111 559 aaPredicted RBP5.57□□□□□ -1.52
SCARNA18-201ENST00000459004 HYAL2Q12891 473 aa5.57□□□□□ -1.52
SCARNA18-201ENST00000459004 PSAPL1Q6NUJ1 521 aa5.57□□□□□ -1.52
SCARNA18-201ENST00000459004 HFE2Q6ZVN8 426 aa5.57□□□□□ -1.52
SCARNA18-201ENST00000459004 ZNF417Q8TAU3 575 aa5.57□□□□□ -1.52
SCARNA18-201ENST00000459004 ZNF587Q96SQ5 575 aaPredicted RBP5.57□□□□□ -1.52
SCARNA18-201ENST00000459004 RBSNQ9H1K0 784 aa5.57□□□□□ -1.52
SCARNA18-201ENST00000459004 PRDM6Q9NQX0 595 aa5.57□□□□□ -1.52
SCARNA18-201ENST00000459004 CNTN3Q9P232 1028 aa5.57□□□□□ -1.52
SCARNA18-201ENST00000459004 J3QW42 95 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms