RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 ERLIN1O75477 346 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 ATP2B3Q16720 1220 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 COPS6Q7L5N1 327 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 PDILTQ8N807 584 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 CNBD1Q8NA66 436 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 KAT14Q9H8E8 782 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 CCDC87Q9NVE4 849 aa12.43□□□□□ -0.42
AMBRA1-202ENST00000458649 ZMYM4Q5VZL5 1548 aa12.42□□□□□ -0.42
AMBRA1-202ENST00000458649 TANGO6Q9C0B7 1094 aa12.42□□□□□ -0.42
AMBRA1-202ENST00000458649 CCDC194A0A1B0GVG4 234 aa12.42□□□□□ -0.42
AMBRA1-202ENST00000458649 PRPF40BQ6NWY9 871 aaKnown RBP12.42□□□□□ -0.42
AMBRA1-202ENST00000458649 IPO4Q8TEX9 1081 aaKnown RBP12.42□□□□□ -0.42
AMBRA1-202ENST00000458649 CHD1O14646 1710 aa12.42□□□□□ -0.42
AMBRA1-202ENST00000458649 IFIT3O14879 490 aaKnown RBP12.42□□□□□ -0.42
AMBRA1-202ENST00000458649 HOXC9P31274 260 aa12.42□□□□□ -0.42
AMBRA1-202ENST00000458649 SH2B1Q9NRF2 756 aaPredicted RBP12.42□□□□□ -0.42
AMBRA1-202ENST00000458649 TIGD1Q96MW7 591 aa12.42□□□□□ -0.42
AMBRA1-202ENST00000458649 ZBTB40Q9NUA8 1239 aa12.42□□□□□ -0.42
AMBRA1-202ENST00000458649 BABAM1Q9NWV8 329 aa12.42□□□□□ -0.42
AMBRA1-202ENST00000458649 MLH3Q9UHC1 1453 aa12.42□□□□□ -0.42
AMBRA1-202ENST00000458649 SKIDA1Q1XH10 827 aa12.41□□□□□ -0.42
AMBRA1-202ENST00000458649 BLMP54132 1417 aaPredicted RBP12.41□□□□□ -0.42
AMBRA1-202ENST00000458649 MYCNP04198 464 aaPredicted RBP12.4□□□□□ -0.42
AMBRA1-202ENST00000458649 KRT24Q2M2I5 525 aa12.4□□□□□ -0.42
AMBRA1-202ENST00000458649 RHPN1Q8TCX5 695 aa12.4□□□□□ -0.42
AMBRA1-202ENST00000458649 CEBPZQ03701 1054 aaKnown RBP12.4□□□□□ -0.42
AMBRA1-202ENST00000458649 MFSD6Q6ZSS7 791 aa12.4□□□□□ -0.42
AMBRA1-202ENST00000458649 LINS1Q8NG48 757 aa12.4□□□□□ -0.42
AMBRA1-202ENST00000458649 BEGAINQ9BUH8 593 aa12.4□□□□□ -0.42
AMBRA1-202ENST00000458649 TRPC5Q9UL62 973 aaPredicted RBP12.4□□□□□ -0.42
AMBRA1-202ENST00000458649 GNAQP50148 359 aa12.4□□□□□ -0.42
AMBRA1-202ENST00000458649 STXBP4Q6ZWJ1 553 aa12.4□□□□□ -0.42
AMBRA1-202ENST00000458649 CCDC150Q8NCX0 1101 aa12.4□□□□□ -0.42
AMBRA1-202ENST00000458649 ZCCHC11Q5TAX3 1644 aaKnown RBP12.4□□□□□ -0.42
AMBRA1-202ENST00000458649 GRM8O00222 908 aa12.4□□□□□ -0.42
AMBRA1-202ENST00000458649 ATP8B2P98198 1209 aa12.4□□□□□ -0.42
AMBRA1-202ENST00000458649 SBNO1A3KN83 1393 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 MAST3O60307 1309 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 SPDYE4A6NLX3 237 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 CBFA2T2O43439 604 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 EIF6P56537 245 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 TRIM35Q9UPQ4 493 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 GOLGA8AA7E2F4 631 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 GOLGA8BA8MQT2 603 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 GTF2A1P52655 376 aaPredicted RBP12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 CHMP4BP1P59074 171 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 SMC5Q8IY18 1101 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 TMTC2Q8N394 836 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 NFATC2IPQ8NCF5 419 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 SH2D4AQ9H788 454 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 PLXNC1O60486 1568 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 GOLIM4O00461 696 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 NEBLO76041 1014 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 SSRP1Q08945 709 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 NAA16Q6N069 864 aaPredicted RBP12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 PYM1Q9BRP8 204 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 FAM107BQ9H098 131 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 CENPHQ9H3R5 247 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 CNNM2Q9H8M5 875 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 HMG20BQ9P0W2 317 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 KDM5CP41229 1560 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 PLEKHG3A1L390 1219 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 PIBF1Q8WXW3 757 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 KRT23Q9C075 422 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 NSFL1CQ9UNZ2 370 aaKnown RBP12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 RNF123Q5XPI4 1314 aa12.39□□□□□ -0.43
AMBRA1-202ENST00000458649 FGFR1OPO95684 399 aaKnown RBP12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 SLC39A6Q13433 755 aa12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 PPFIBP1Q86W92 1011 aa12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 CERS3Q8IU89 383 aa12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 CAGE1Q8TC20 777 aa12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 TSG101Q99816 390 aa12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 H0YIN7 160 aa12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 SDSP20132 328 aa12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 DCTPP1Q9H773 170 aa12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 APBA3O96018 575 aa12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 PDE1AP54750 535 aa12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 NLRP5P59047 1200 aa12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 FAM98CQ17RN3 349 aaKnown RBP12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 SPATA32Q96LK8 384 aa12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 GNAT2P19087 354 aa12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 C8orf34Q49A92 452 aa12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 TSHZ3Q63HK5 1081 aa12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 TRERF1Q96PN7 1200 aa12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 IRS4O14654 1257 aaPredicted RBP12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 RNMTO43148 476 aaKnown RBP12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 CCDC192P0DO97 292 aa12.38□□□□□ -0.43
AMBRA1-202ENST00000458649 MYOM2P54296 1465 aa12.37□□□□□ -0.43
AMBRA1-202ENST00000458649 KDM5AP29375 1690 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-202ENST00000458649 CYP7A1P22680 504 aa12.37□□□□□ -0.43
AMBRA1-202ENST00000458649 CCDC83Q8IWF9 413 aa12.37□□□□□ -0.43
AMBRA1-202ENST00000458649 LRRC27Q9C0I9 530 aa12.37□□□□□ -0.43
AMBRA1-202ENST00000458649 CETN2P41208 172 aa12.37□□□□□ -0.43
AMBRA1-202ENST00000458649 NCOA7Q8NI08 942 aa12.37□□□□□ -0.43
AMBRA1-202ENST00000458649 VEZTQ9HBM0 779 aa12.37□□□□□ -0.43
AMBRA1-202ENST00000458649 LIMCH1Q9UPQ0 1083 aa12.37□□□□□ -0.43
AMBRA1-202ENST00000458649 SERPINC1P01008 464 aa12.37□□□□□ -0.43
AMBRA1-202ENST00000458649 RBM25P49756 843 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-202ENST00000458649 ESR2Q92731 530 aa12.37□□□□□ -0.43
AMBRA1-202ENST00000458649 TNMDQ9H2S6 317 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms