RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 GPRC5DQ9NZD1 345 aa28.04■■■□□ 2.08
CPNE1-220ENST00000458038 CHPF2Q9P2E5 772 aa28.04■■■□□ 2.08
CPNE1-220ENST00000458038 CAPN15O75808 1086 aa28.03■■■□□ 2.08
CPNE1-220ENST00000458038 KIAA2012Q0VF49 1180 aa28.03■■■□□ 2.08
CPNE1-220ENST00000458038 CFAP44Q96MT7 982 aa28.03■■■□□ 2.08
CPNE1-220ENST00000458038 WBP1LQ9NX94 342 aa28.03■■■□□ 2.08
CPNE1-220ENST00000458038 ABT1Q9ULW3 272 aaKnown RBP28.03■■■□□ 2.08
CPNE1-220ENST00000458038 TRPM7Q96QT4 1865 aa28.02■■■□□ 2.08
CPNE1-220ENST00000458038 CDHR2Q9BYE9 1310 aa28.02■■■□□ 2.08
CPNE1-220ENST00000458038 CXCL9Q07325 125 aa28.02■■■□□ 2.08
CPNE1-220ENST00000458038 KRT24Q2M2I5 525 aa28.02■■■□□ 2.08
CPNE1-220ENST00000458038 HYPKQ9NX55 129 aa28.02■■■□□ 2.08
CPNE1-220ENST00000458038 ADAMTS8Q9UP79 889 aa28.02■■■□□ 2.08
CPNE1-220ENST00000458038 MAP2K1Q02750 393 aaPredicted RBP28.01■■■□□ 2.07
CPNE1-220ENST00000458038 TNIP1Q15025 636 aa28.01■■■□□ 2.07
CPNE1-220ENST00000458038 SLC51AQ86UW1 340 aa28.01■■■□□ 2.07
CPNE1-220ENST00000458038 WDR33Q9C0J8 1336 aaKnown RBP28■■■□□ 2.07
CPNE1-220ENST00000458038 CIAPIN1Q6FI81 312 aa28■■■□□ 2.07
CPNE1-220ENST00000458038 ISCA1Q9BUE6 129 aa27.99■■■□□ 2.07
CPNE1-220ENST00000458038 ECE1P42892 770 aa27.98■■■□□ 2.07
CPNE1-220ENST00000458038 TRIM28Q13263 835 aaKnown RBP27.98■■■□□ 2.07
CPNE1-220ENST00000458038 SF3B3Q15393 1217 aaKnown RBP27.97■■■□□ 2.07
CPNE1-220ENST00000458038 DUSP27Q5VZP5 1158 aa27.97■■■□□ 2.07
CPNE1-220ENST00000458038 ZC3H15Q8WU90 426 aaKnown RBP27.97■■■□□ 2.07
CPNE1-220ENST00000458038 GMPSP49915 693 aaPredicted RBP27.96■■■□□ 2.07
CPNE1-220ENST00000458038 TAF1P21675 1872 aa27.95■■■□□ 2.07
CPNE1-220ENST00000458038 HSP90B1P14625 803 aaKnown RBP27.95■■■□□ 2.06
CPNE1-220ENST00000458038 CALD1Q05682 793 aaKnown RBP27.95■■■□□ 2.06
CPNE1-220ENST00000458038 BCL2L13Q9BXK5 485 aa27.95■■■□□ 2.06
CPNE1-220ENST00000458038 PGAP2Q9UHJ9 254 aa27.95■■■□□ 2.06
CPNE1-220ENST00000458038 FAM89AQ96GI7 184 aa27.94■■■□□ 2.06
CPNE1-220ENST00000458038 CHMP4AQ9BY43 222 aa27.94■■■□□ 2.06
CPNE1-220ENST00000458038 DDX60Q8IY21 1712 aaKnown RBP27.94■■■□□ 2.06
CPNE1-220ENST00000458038 LRRC37AA6NMS7 1700 aa27.93■■■□□ 2.06
CPNE1-220ENST00000458038 CST9Q5W186 159 aa27.93■■■□□ 2.06
CPNE1-220ENST00000458038 RAD17O75943 681 aa27.92■■■□□ 2.06
CPNE1-220ENST00000458038 CAPNS2Q96L46 248 aa27.92■■■□□ 2.06
CPNE1-220ENST00000458038 PRKRIP1Q9H875 184 aaPredicted RBP27.92■■■□□ 2.06
CPNE1-220ENST00000458038 MBIPQ9NS73 344 aa27.92■■■□□ 2.06
CPNE1-220ENST00000458038 TLL2Q9Y6L7 1015 aa27.92■■■□□ 2.06
CPNE1-220ENST00000458038 ATP5J2-PTCD1G3V325 749 aa27.91■■■□□ 2.06
CPNE1-220ENST00000458038 H7C1D1 291 aa27.91■■■□□ 2.06
CPNE1-220ENST00000458038 ZNF853P0CG23 659 aa27.91■■■□□ 2.06
CPNE1-220ENST00000458038 GNAI1P63096 354 aa27.91■■■□□ 2.06
CPNE1-220ENST00000458038 WASHC4Q2M389 1173 aa27.91■■■□□ 2.06
CPNE1-220ENST00000458038 IFT57Q9NWB7 429 aa27.91■■■□□ 2.06
CPNE1-220ENST00000458038 TRAF5O00463 557 aa27.9■■■□□ 2.06
CPNE1-220ENST00000458038 LBX1P52954 281 aa27.9■■■□□ 2.06
CPNE1-220ENST00000458038 DPF2Q92785 391 aa27.9■■■□□ 2.06
CPNE1-220ENST00000458038 BEGAINQ9BUH8 593 aa27.9■■■□□ 2.06
CPNE1-220ENST00000458038 FMR1Q06787 632 aaKnown RBP eCLIP27.89■■■□□ 2.067e-7■■■□□ 18.6
CPNE1-220ENST00000458038 GOLGA2Q08379 1002 aa27.89■■■□□ 2.06
CPNE1-220ENST00000458038 PAXIP1Q6ZW49 1069 aaPredicted RBP27.89■■■□□ 2.06
CPNE1-220ENST00000458038 RIC3Q7Z5B4 369 aa27.89■■■□□ 2.06
CPNE1-220ENST00000458038 GPR101Q96P66 508 aaPredicted RBP27.89■■■□□ 2.06
CPNE1-220ENST00000458038 CNOT7Q9UIV1 285 aaKnown RBP27.89■■■□□ 2.06
CPNE1-220ENST00000458038 NSFL1CQ9UNZ2 370 aaKnown RBP27.89■■■□□ 2.06
CPNE1-220ENST00000458038 IRS4O14654 1257 aaPredicted RBP27.88■■■□□ 2.05
CPNE1-220ENST00000458038 ZBTB38Q8NAP3 1195 aaPredicted RBP27.88■■■□□ 2.05
CPNE1-220ENST00000458038 CELF1Q92879 486 aaKnown RBP27.88■■■□□ 2.05
CPNE1-220ENST00000458038 HHIPL1Q96JK4 782 aa27.88■■■□□ 2.05
CPNE1-220ENST00000458038 EYA3Q99504 573 aa27.88■■■□□ 2.05
CPNE1-220ENST00000458038 DUOX1Q9NRD9 1551 aa27.87■■■□□ 2.05
CPNE1-220ENST00000458038 YDJCA8MPS7 323 aa27.87■■■□□ 2.05
CPNE1-220ENST00000458038 HSPA8P11142 646 aaKnown RBP27.87■■■□□ 2.05
CPNE1-220ENST00000458038 MAP2K2P36507 400 aa27.87■■■□□ 2.05
CPNE1-220ENST00000458038 RPS8P62241 208 aaKnown RBP27.87■■■□□ 2.05
CPNE1-220ENST00000458038 CDC37L1Q7L3B6 337 aa27.87■■■□□ 2.05
CPNE1-220ENST00000458038 THSD7BQ9C0I4 1608 aa27.87■■■□□ 2.05
CPNE1-220ENST00000458038 C6orf229H3BNL8 230 aa27.85■■■□□ 2.05
CPNE1-220ENST00000458038 APAF1O14727 1248 aa27.85■■■□□ 2.05
CPNE1-220ENST00000458038 CELF2O95319 508 aaKnown RBP27.85■■■□□ 2.05
CPNE1-220ENST00000458038 CYP4F22Q6NT55 531 aa27.85■■■□□ 2.05
CPNE1-220ENST00000458038 SAPCD2Q86UD0 394 aa27.85■■■□□ 2.05
CPNE1-220ENST00000458038 ZNF428Q96B54 188 aa27.85■■■□□ 2.05
CPNE1-220ENST00000458038 RPS12P25398 132 aaKnown RBP27.84■■■□□ 2.05
CPNE1-220ENST00000458038 HIRAP54198 1017 aaPredicted RBP27.84■■■□□ 2.05
CPNE1-220ENST00000458038 CCDC191Q8NCU4 936 aa27.84■■■□□ 2.05
CPNE1-220ENST00000458038 GLIS2Q9BZE0 524 aaPredicted RBP27.84■■■□□ 2.05
CPNE1-220ENST00000458038 RTL5Q5HYW3 569 aaPredicted RBP27.83■■■□□ 2.05
CPNE1-220ENST00000458038 MICALL2Q8IY33 904 aa27.83■■■□□ 2.05
CPNE1-220ENST00000458038 POLLQ9UGP5 575 aa27.83■■■□□ 2.05
CPNE1-220ENST00000458038 PSMD14O00487 310 aa27.82■■■□□ 2.04
CPNE1-220ENST00000458038 DDX58O95786 925 aaKnown RBP27.82■■■□□ 2.04
CPNE1-220ENST00000458038 GPSM2P81274 684 aa27.82■■■□□ 2.04
CPNE1-220ENST00000458038 PODXL2Q9NZ53 605 aa27.82■■■□□ 2.04
CPNE1-220ENST00000458038 TRPM4Q8TD43 1214 aa27.81■■■□□ 2.04
CPNE1-220ENST00000458038 PHAXQ9H814 394 aaKnown RBP27.81■■■□□ 2.04
CPNE1-220ENST00000458038 DBNDD1Q9H9R9 158 aa27.81■■■□□ 2.04
CPNE1-220ENST00000458038 RIMBP2O15034 1052 aa27.8■■■□□ 2.04
CPNE1-220ENST00000458038 CA12O43570 354 aa27.8■■■□□ 2.04
CPNE1-220ENST00000458038 PCCAP05165 728 aaPredicted RBP27.8■■■□□ 2.04
CPNE1-220ENST00000458038 GRM1Q13255 1194 aa27.8■■■□□ 2.04
CPNE1-220ENST00000458038 CCDC152Q4G0S7 254 aa27.8■■■□□ 2.04
CPNE1-220ENST00000458038 CCDC30Q5VVM6 783 aa27.8■■■□□ 2.04
CPNE1-220ENST00000458038 TBC1D16Q8TBP0 767 aa27.8■■■□□ 2.04
CPNE1-220ENST00000458038 ZC3H12CQ9C0D7 883 aaKnown RBP27.8■■■□□ 2.04
CPNE1-220ENST00000458038 ELL2O00472 640 aaPredicted RBP27.79■■■□□ 2.04
CPNE1-220ENST00000458038 ECE2O60344 883 aa27.79■■■□□ 2.04
CPNE1-220ENST00000458038 MYD88Q99836 296 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms