RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 KAZALD1Q96I82 304 aa11.03□□□□□ -0.64
CDC42EP3-204ENST00000457889 ARXQ96QS3 562 aa11.03□□□□□ -0.64
CDC42EP3-204ENST00000457889 NARFQ9UHQ1 456 aa11.03□□□□□ -0.64
CDC42EP3-204ENST00000457889 FBXO3Q9UK99 471 aa11.03□□□□□ -0.64
CDC42EP3-204ENST00000457889 TBC1D2BQ9UPU7 963 aa11.03□□□□□ -0.64
CDC42EP3-204ENST00000457889 SSFA2P28290 1259 aa11.02□□□□□ -0.65
CDC42EP3-204ENST00000457889 RGS3P49796 1198 aa11.02□□□□□ -0.65
CDC42EP3-204ENST00000457889 HLFQ16534 295 aa11.02□□□□□ -0.65
CDC42EP3-204ENST00000457889 COPRSQ9NQ92 184 aa11.02□□□□□ -0.65
CDC42EP3-204ENST00000457889 EIF5BO60841 1220 aaKnown RBP11.01□□□□□ -0.65
CDC42EP3-204ENST00000457889 ZPR1O75312 459 aa11.01□□□□□ -0.65
CDC42EP3-204ENST00000457889 SURF6O75683 361 aaKnown RBP11.01□□□□□ -0.65
CDC42EP3-204ENST00000457889 LNPKQ9C0E8 428 aa11.01□□□□□ -0.65
CDC42EP3-204ENST00000457889 AOX1Q06278 1338 aa11.01□□□□□ -0.65
CDC42EP3-204ENST00000457889 SH3TC1Q8TE82 1336 aa11.01□□□□□ -0.65
CDC42EP3-204ENST00000457889 TNS1Q9HBL0 1735 aaKnown RBP11.01□□□□□ -0.65
CDC42EP3-204ENST00000457889 FOXO4P98177 505 aa11□□□□□ -0.65
CDC42EP3-204ENST00000457889 TXNRD1Q16881 649 aa11□□□□□ -0.65
CDC42EP3-204ENST00000457889 FAM161AQ3B820 660 aa11□□□□□ -0.65
CDC42EP3-204ENST00000457889 BMP2KLQ5H9B9 411 aa11□□□□□ -0.65
CDC42EP3-204ENST00000457889 TRAPPC3LQ5T215 181 aa11□□□□□ -0.65
CDC42EP3-204ENST00000457889 FLAD1Q8NFF5 587 aa11□□□□□ -0.65
CDC42EP3-204ENST00000457889 UTP14AQ9BVJ6 771 aaKnown RBP11□□□□□ -0.65
CDC42EP3-204ENST00000457889 NYXQ9GZU5 481 aa11□□□□□ -0.65
CDC42EP3-204ENST00000457889 TRMT112Q9UI30 125 aaKnown RBP11□□□□□ -0.65
CDC42EP3-204ENST00000457889 EXOC6BQ9Y2D4 811 aa11□□□□□ -0.65
CDC42EP3-204ENST00000457889 UBN2Q6ZU65 1347 aa11□□□□□ -0.65
CDC42EP3-204ENST00000457889 USP42Q9H9J4 1324 aaKnown RBP11□□□□□ -0.65
CDC42EP3-204ENST00000457889 LAMB2P55268 1798 aa10.99□□□□□ -0.65
CDC42EP3-204ENST00000457889 PDE8AO60658 829 aa10.99□□□□□ -0.65
CDC42EP3-204ENST00000457889 APBA3O96018 575 aa10.99□□□□□ -0.65
CDC42EP3-204ENST00000457889 CSF1RP07333 972 aa10.99□□□□□ -0.65
CDC42EP3-204ENST00000457889 PDE4AP27815 886 aa10.99□□□□□ -0.65
CDC42EP3-204ENST00000457889 RFC4P35249 363 aa10.99□□□□□ -0.65
CDC42EP3-204ENST00000457889 G3BP1Q13283 466 aaKnown RBP eCLIP10.99□□□□□ -0.65
CDC42EP3-204ENST00000457889 OS9Q13438 667 aaPredicted RBP10.99□□□□□ -0.65
CDC42EP3-204ENST00000457889 LMBR1LQ6UX01 489 aa10.99□□□□□ -0.65
CDC42EP3-204ENST00000457889 OSBPL3Q9H4L5 887 aa10.99□□□□□ -0.65
CDC42EP3-204ENST00000457889 LRRC4BQ9NT99 713 aa10.99□□□□□ -0.65
CDC42EP3-204ENST00000457889 NIP7Q9Y221 180 aaKnown RBP eCLIP10.99□□□□□ -0.65
CDC42EP3-204ENST00000457889 UBR3Q6ZT12 1888 aa10.99□□□□□ -0.65
CDC42EP3-204ENST00000457889 RTL9Q8NET4 1388 aa10.99□□□□□ -0.65
CDC42EP3-204ENST00000457889 COL24A1Q17RW2 1714 aa10.98□□□□□ -0.65
CDC42EP3-204ENST00000457889 MYH3P11055 1940 aa10.98□□□□□ -0.65
CDC42EP3-204ENST00000457889 IRS4O14654 1257 aaPredicted RBP10.98□□□□□ -0.65
CDC42EP3-204ENST00000457889 CIAO1O76071 339 aa10.98□□□□□ -0.65
CDC42EP3-204ENST00000457889 GPTP24298 496 aa10.98□□□□□ -0.65
CDC42EP3-204ENST00000457889 RFX5P48382 616 aaPredicted RBP10.98□□□□□ -0.65
CDC42EP3-204ENST00000457889 CTSWP56202 376 aa10.98□□□□□ -0.65
CDC42EP3-204ENST00000457889 EPHA10Q5JZY3 1008 aa10.98□□□□□ -0.65
CDC42EP3-204ENST00000457889 CLASRPQ8N2M8 674 aaKnown RBP10.98□□□□□ -0.65
CDC42EP3-204ENST00000457889 RHPN1Q8TCX5 695 aa10.98□□□□□ -0.65
CDC42EP3-204ENST00000457889 ARHGEF1Q92888 912 aaKnown RBP10.98□□□□□ -0.65
CDC42EP3-204ENST00000457889 FAM89AQ96GI7 184 aa10.98□□□□□ -0.65
CDC42EP3-204ENST00000457889 GPATCH3Q96I76 525 aa10.98□□□□□ -0.65
CDC42EP3-204ENST00000457889 SGIP1Q9BQI5 828 aa10.98□□□□□ -0.65
CDC42EP3-204ENST00000457889 TMEM106CQ9BVX2 250 aa10.98□□□□□ -0.65
CDC42EP3-204ENST00000457889 EP400Q96L91 3159 aa10.98□□□□□ -0.65
CDC42EP3-204ENST00000457889 C4AP0C0L4 1744 aa10.98□□□□□ -0.65
CDC42EP3-204ENST00000457889 NTSR2O95665 410 aa10.97□□□□□ -0.65
CDC42EP3-204ENST00000457889 KCNQ4P56696 695 aa10.97□□□□□ -0.65
CDC42EP3-204ENST00000457889 IFIT5Q13325 482 aaKnown RBP10.97□□□□□ -0.65
CDC42EP3-204ENST00000457889 CCDC57Q2TAC2 916 aa10.97□□□□□ -0.65
CDC42EP3-204ENST00000457889 PLEKHM2Q8IWE5 1019 aa10.97□□□□□ -0.65
CDC42EP3-204ENST00000457889 BACH2Q9BYV9 841 aa10.97□□□□□ -0.65
CDC42EP3-204ENST00000457889 STAP2Q9UGK3 403 aa10.97□□□□□ -0.65
CDC42EP3-204ENST00000457889 CARMIL3Q8ND23 1372 aa10.97□□□□□ -0.65
CDC42EP3-204ENST00000457889 RIC1Q4ADV7 1423 aa10.97□□□□□ -0.65
CDC42EP3-204ENST00000457889 TTC41PQ6P2S7 1318 aa10.96□□□□□ -0.65
CDC42EP3-204ENST00000457889 SALL3Q9BXA9 1300 aa10.96□□□□□ -0.65
CDC42EP3-204ENST00000457889 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.96□□□□□ -0.65
CDC42EP3-204ENST00000457889 MX1P20591 662 aa10.96□□□□□ -0.65
CDC42EP3-204ENST00000457889 IL15P40933 162 aaPredicted RBP10.96□□□□□ -0.65
CDC42EP3-204ENST00000457889 PTPN12Q05209 780 aaKnown RBP10.96□□□□□ -0.65
CDC42EP3-204ENST00000457889 SUSD4Q5VX71 490 aa10.96□□□□□ -0.65
CDC42EP3-204ENST00000457889 USPL1Q5W0Q7 1092 aa10.96□□□□□ -0.65
CDC42EP3-204ENST00000457889 CCDC125Q86Z20 511 aa10.96□□□□□ -0.65
CDC42EP3-204ENST00000457889 FAM212AQ96EL1 285 aa10.96□□□□□ -0.65
CDC42EP3-204ENST00000457889 SETDB2Q96T68 719 aa10.96□□□□□ -0.65
CDC42EP3-204ENST00000457889 GPR108Q9NPR9 543 aa10.96□□□□□ -0.65
CDC42EP3-204ENST00000457889 PYGBP11216 843 aa10.95□□□□□ -0.66
CDC42EP3-204ENST00000457889 SF3B2Q13435 895 aaKnown RBP10.95□□□□□ -0.66
CDC42EP3-204ENST00000457889 CCDC152Q4G0S7 254 aa10.95□□□□□ -0.66
CDC42EP3-204ENST00000457889 SLC10A5Q5PT55 438 aa10.95□□□□□ -0.66
CDC42EP3-204ENST00000457889 TTC22Q5TAA0 569 aa10.95□□□□□ -0.66
CDC42EP3-204ENST00000457889 TPTE2Q6XPS3 522 aa10.95□□□□□ -0.66
CDC42EP3-204ENST00000457889 TTLL11Q8NHH1 800 aa10.95□□□□□ -0.66
CDC42EP3-204ENST00000457889 BCL2L12Q9HB09 334 aa10.95□□□□□ -0.66
CDC42EP3-204ENST00000457889 CHMP3Q9Y3E7 222 aa10.95□□□□□ -0.66
CDC42EP3-204ENST00000457889 LRP5O75197 1615 aa10.95□□□□□ -0.66
CDC42EP3-204ENST00000457889 ANKRD18BA2A2Z9 1011 aa10.94□□□□□ -0.66
CDC42EP3-204ENST00000457889 EYA2O00167 538 aa10.94□□□□□ -0.66
CDC42EP3-204ENST00000457889 APBB1O00213 710 aa10.94□□□□□ -0.66
CDC42EP3-204ENST00000457889 ERC2O15083 957 aa10.94□□□□□ -0.66
CDC42EP3-204ENST00000457889 PDE1AP54750 535 aa10.94□□□□□ -0.66
CDC42EP3-204ENST00000457889 C8orf34Q49A92 452 aa10.94□□□□□ -0.66
CDC42EP3-204ENST00000457889 TAF7LQ5H9L4 462 aa10.94□□□□□ -0.66
CDC42EP3-204ENST00000457889 SKAP1Q86WV1 359 aa10.94□□□□□ -0.66
CDC42EP3-204ENST00000457889 NBPF5PQ86XG9 351 aaPredicted RBP10.94□□□□□ -0.66
CDC42EP3-204ENST00000457889 TSHZ2Q9NRE2 1034 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms