RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 GLTPD2A6NH11 291 aa22.98■■□□□ 1.27
PDLIM2-215ENST00000456545 F6X3S4 739 aa22.98■■□□□ 1.27
PDLIM2-215ENST00000456545 IARSP41252 1262 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-215ENST00000456545 SLC4A10Q6U841 1118 aa22.98■■□□□ 1.27
PDLIM2-215ENST00000456545 PSMD1Q99460 953 aa22.98■■□□□ 1.27
PDLIM2-215ENST00000456545 DDX60Q8IY21 1712 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-215ENST00000456545 GCKRQ14397 625 aa22.97■■□□□ 1.27
PDLIM2-215ENST00000456545 UBE3BQ7Z3V4 1068 aa22.97■■□□□ 1.27
PDLIM2-215ENST00000456545 MPNDQ8N594 471 aa22.97■■□□□ 1.27
PDLIM2-215ENST00000456545 JDP2Q8WYK2 163 aa22.97■■□□□ 1.27
PDLIM2-215ENST00000456545 CCDC85AQ96PX6 553 aaPredicted RBP22.97■■□□□ 1.27
PDLIM2-215ENST00000456545 RRAGCQ9HB90 399 aa22.97■■□□□ 1.27
PDLIM2-215ENST00000456545 NMRK2Q9NPI5 230 aa22.97■■□□□ 1.27
PDLIM2-215ENST00000456545 CDHR2Q9BYE9 1310 aa22.97■■□□□ 1.27
PDLIM2-215ENST00000456545 C1QTNF8P60827 252 aa22.96■■□□□ 1.27
PDLIM2-215ENST00000456545 DPP8Q6V1X1 898 aaPredicted RBP22.96■■□□□ 1.27
PDLIM2-215ENST00000456545 SUPT20HQ8NEM7 779 aa22.96■■□□□ 1.27
PDLIM2-215ENST00000456545 RPS8P62241 208 aaKnown RBP22.95■■□□□ 1.26
PDLIM2-215ENST00000456545 TRMT2AQ8IZ69 625 aaKnown RBP22.95■■□□□ 1.26
PDLIM2-215ENST00000456545 MRPL50Q8N5N7 158 aaKnown RBP22.95■■□□□ 1.26
PDLIM2-215ENST00000456545 CELF1Q92879 486 aaKnown RBP22.95■■□□□ 1.26
PDLIM2-215ENST00000456545 DICER1Q9UPY3 1922 aaKnown RBP22.95■■□□□ 1.26
PDLIM2-215ENST00000456545 H7C1W4 665 aa22.94■■□□□ 1.26
PDLIM2-215ENST00000456545 LARGE2Q8N3Y3 721 aa22.94■■□□□ 1.26
PDLIM2-215ENST00000456545 SSH1Q8WYL5 1049 aa22.94■■□□□ 1.26
PDLIM2-215ENST00000456545 KIF3CO14782 793 aa22.93■■□□□ 1.26
PDLIM2-215ENST00000456545 CT47B1P0C2W7 299 aaPredicted RBP22.93■■□□□ 1.26
PDLIM2-215ENST00000456545 CTSWP56202 376 aa22.93■■□□□ 1.26
PDLIM2-215ENST00000456545 ALDH1L2Q3SY69 923 aa22.93■■□□□ 1.26
PDLIM2-215ENST00000456545 BCL2L13Q9BXK5 485 aa22.93■■□□□ 1.26
PDLIM2-215ENST00000456545 SEC31BQ9NQW1 1179 aa22.93■■□□□ 1.26
PDLIM2-215ENST00000456545 SMC4Q9NTJ3 1288 aa22.93■■□□□ 1.26
PDLIM2-215ENST00000456545 TAF1P21675 1872 aa22.93■■□□□ 1.26
PDLIM2-215ENST00000456545 TIAM2Q8IVF5 1701 aa22.93■■□□□ 1.26
PDLIM2-215ENST00000456545 BEND3Q5T5X7 828 aa22.92■■□□□ 1.26
PDLIM2-215ENST00000456545 C9orf78Q9NZ63 289 aaPredicted RBP22.92■■□□□ 1.26
PDLIM2-215ENST00000456545 NSFL1CQ9UNZ2 370 aaKnown RBP22.92■■□□□ 1.26
PDLIM2-215ENST00000456545 PPIP5K2O43314 1243 aa22.91■■□□□ 1.26
PDLIM2-215ENST00000456545 VEGFAP15692 232 aaPredicted RBP22.91■■□□□ 1.26
PDLIM2-215ENST00000456545 SLC51AQ86UW1 340 aa22.91■■□□□ 1.26
PDLIM2-215ENST00000456545 ANKRD18AQ8IVF6 992 aa22.91■■□□□ 1.26
PDLIM2-215ENST00000456545 CDC5LQ99459 802 aaKnown RBP22.91■■□□□ 1.26
PDLIM2-215ENST00000456545 SRCIN1Q9C0H9 1055 aa22.91■■□□□ 1.26
PDLIM2-215ENST00000456545 PTPRCP08575 1304 aa22.9■■□□□ 1.26
PDLIM2-215ENST00000456545 DDNO94850 711 aaPredicted RBP22.9■■□□□ 1.26
PDLIM2-215ENST00000456545 EIF6P56537 245 aaKnown RBP22.9■■□□□ 1.26
PDLIM2-215ENST00000456545 NIM1KQ8IY84 436 aa22.9■■□□□ 1.26
PDLIM2-215ENST00000456545 TTLL11Q8NHH1 800 aa22.9■■□□□ 1.26
PDLIM2-215ENST00000456545 VPS33BQ9H267 617 aa22.9■■□□□ 1.26
PDLIM2-215ENST00000456545 ALDH1L1O75891 902 aa22.89■■□□□ 1.25
PDLIM2-215ENST00000456545 TOMM70O94826 608 aa22.89■■□□□ 1.25
PDLIM2-215ENST00000456545 C6orf229H3BNL8 230 aa22.88■■□□□ 1.25
PDLIM2-215ENST00000456545 AOC3Q16853 763 aa22.88■■□□□ 1.25
PDLIM2-215ENST00000456545 ANKIB1Q9P2G1 1089 aa22.88■■□□□ 1.25
PDLIM2-215ENST00000456545 PLA2G12BQ9BX93 195 aa22.87■■□□□ 1.25
PDLIM2-215ENST00000456545 RTFDC1Q9BY42 306 aaPredicted RBP22.87■■□□□ 1.25
PDLIM2-215ENST00000456545 GREM2Q9H772 168 aa22.87■■□□□ 1.25
PDLIM2-215ENST00000456545 SNED1Q8TER0 1413 aa22.86■■□□□ 1.25
PDLIM2-215ENST00000456545 FZD9O00144 591 aa22.86■■□□□ 1.25
PDLIM2-215ENST00000456545 GRM8O00222 908 aa22.86■■□□□ 1.25
PDLIM2-215ENST00000456545 GPSM2P81274 684 aa22.86■■□□□ 1.25
PDLIM2-215ENST00000456545 CHMP3Q9Y3E7 222 aa22.86■■□□□ 1.25
PDLIM2-215ENST00000456545 GJA3Q9Y6H8 435 aa22.86■■□□□ 1.25
PDLIM2-215ENST00000456545 IGHMBP2P38935 993 aaKnown RBP22.85■■□□□ 1.25
PDLIM2-215ENST00000456545 CASP7P55210 303 aa22.85■■□□□ 1.25
PDLIM2-215ENST00000456545 WASHC4Q2M389 1173 aa22.85■■□□□ 1.25
PDLIM2-215ENST00000456545 EYA3Q99504 573 aa22.85■■□□□ 1.25
PDLIM2-215ENST00000456545 MYH3P11055 1940 aa22.84■■□□□ 1.25
PDLIM2-215ENST00000456545 G3V3G9 751 aa22.84■■□□□ 1.25
PDLIM2-215ENST00000456545 DCAF8Q5TAQ9 597 aa22.84■■□□□ 1.25
PDLIM2-215ENST00000456545 ZNF541Q9H0D2 1346 aa22.83■■□□□ 1.25
PDLIM2-215ENST00000456545 IQCA1LA6NCM1 817 aa22.83■■□□□ 1.25
PDLIM2-215ENST00000456545 RIMBP2O15034 1052 aa22.83■■□□□ 1.25
PDLIM2-215ENST00000456545 ITGA6P23229 1130 aa22.83■■□□□ 1.25
PDLIM2-215ENST00000456545 MPHOSPH8Q99549 860 aa22.83■■□□□ 1.25
PDLIM2-215ENST00000456545 NOB1Q9ULX3 412 aaKnown RBP22.83■■□□□ 1.25
PDLIM2-215ENST00000456545 ANKRD18BA2A2Z9 1011 aa22.82■■□□□ 1.24
PDLIM2-215ENST00000456545 KIAA2012Q0VF49 1180 aa22.82■■□□□ 1.24
PDLIM2-215ENST00000456545 GPC2Q8N158 579 aa22.82■■□□□ 1.24
PDLIM2-215ENST00000456545 RBM46Q8TBY0 533 aaKnown RBP22.82■■□□□ 1.24
PDLIM2-215ENST00000456545 GGA1Q9UJY5 639 aa22.82■■□□□ 1.24
PDLIM2-215ENST00000456545 ZNRF3Q9ULT6 936 aa22.82■■□□□ 1.24
PDLIM2-215ENST00000456545 CSF1RP07333 972 aa22.81■■□□□ 1.24
PDLIM2-215ENST00000456545 RARSP54136 660 aaKnown RBP22.81■■□□□ 1.24
PDLIM2-215ENST00000456545 IFIT5Q13325 482 aaKnown RBP22.81■■□□□ 1.24
PDLIM2-215ENST00000456545 FAM161AQ3B820 660 aa22.81■■□□□ 1.24
PDLIM2-215ENST00000456545 ZC3H12CQ9C0D7 883 aaKnown RBP22.81■■□□□ 1.24
PDLIM2-215ENST00000456545 BSDC1Q9NW68 430 aaPredicted RBP22.81■■□□□ 1.24
PDLIM2-215ENST00000456545 POLLQ9UGP5 575 aa22.81■■□□□ 1.24
PDLIM2-215ENST00000456545 RTL9Q8NET4 1388 aa22.8■■□□□ 1.24
PDLIM2-215ENST00000456545 UFL1O94874 794 aa22.8■■□□□ 1.24
PDLIM2-215ENST00000456545 LMBR1LQ6UX01 489 aa22.8■■□□□ 1.24
PDLIM2-215ENST00000456545 TBC1D16Q8TBP0 767 aa22.8■■□□□ 1.24
PDLIM2-215ENST00000456545 API5Q9BZZ5 524 aaKnown RBP22.8■■□□□ 1.24
PDLIM2-215ENST00000456545 POTECB2RU33 542 aa22.79■■□□□ 1.24
PDLIM2-215ENST00000456545 LMOD1P29536 600 aaPredicted RBP22.79■■□□□ 1.24
PDLIM2-215ENST00000456545 FOXO4P98177 505 aa22.79■■□□□ 1.24
PDLIM2-215ENST00000456545 CCDC57Q2TAC2 916 aa22.79■■□□□ 1.24
PDLIM2-215ENST00000456545 TAF7LQ5H9L4 462 aa22.79■■□□□ 1.24
PDLIM2-215ENST00000456545 PODXL2Q9NZ53 605 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms