RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ZNF589Q86UQ0 364 aaPredicted RBP5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 STAP2Q9UGK3 403 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 DENND2AQ9ULE3 1009 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 MROH1Q8NDA8 1641 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 NKRFO15226 690 aaKnown RBP eCLIP5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 ETF1P62495 437 aaKnown RBP5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 SYCP1Q15431 976 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 VPS53Q5VIR6 699 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 FAM177A1Q8N128 213 aaPredicted RBP5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 USP28Q96RU2 1077 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 XPO4Q9C0E2 1151 aaKnown RBP5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 JRKLQ9Y4A0 524 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 INO80Q9ULG1 1556 aaPredicted RBP5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 IRF6O14896 467 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 FCHSD2O94868 740 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 UPP2O95045 317 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 NCBP3Q53F19 620 aaKnown RBP5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 DNAJC2Q99543 621 aaKnown RBP5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 TLR7Q9NYK1 1049 aaKnown RBP5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 TFR2Q9UP52 801 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 SLU7O95391 586 aaKnown RBP5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 CASQ1P31415 396 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 PTPN14Q15678 1187 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 TPD52L1Q16890 204 aaPredicted RBP5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 ORC3Q9UBD5 711 aaPredicted RBP5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 DNAI1Q9UI46 699 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 LRRFIP2Q9Y608 721 aaKnown RBP5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 MYH13Q9UKX3 1938 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 SIGLEC1Q9BZZ2 1709 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 VWA3AA6NCI4 1184 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 MAP2K7O14733 419 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 CASTP20810 708 aaKnown RBP5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 OAS2P29728 719 aaKnown RBP5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 NOA1Q8NC60 698 aaKnown RBP5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 KLHDC4Q8TBB5 520 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 ERO1AQ96HE7 468 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 PPP1R13BQ96KQ4 1090 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 DRC1Q96MC2 740 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 L1RE1Q9UN81 338 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 PLEKHG2Q9H7P9 1386 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 TRPM2O94759 1503 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 SMC1AQ14683 1233 aaKnown RBP5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 RPAP2Q8IXW5 612 aaPredicted RBP5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 GDAP1L1Q96MZ0 367 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 FMNL2Q96PY5 1086 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 PARD6BQ9BYG5 372 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 CAMSAP1Q5T5Y3 1602 aa5.36□□□□□ -1.55
DEPDC1-202ENST00000456315 EIF2AK4Q9P2K8 1649 aaKnown RBP5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 BIN1O00499 593 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 MYBL2P10244 700 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 PPARDQ03181 441 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 NCAPGQ9BPX3 1015 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 NOL10Q9BSC4 688 aaKnown RBP5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 SEC31BQ9NQW1 1179 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 LIMCH1Q9UPQ0 1083 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 PA2G4Q9UQ80 394 aaKnown RBP5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 RRP15Q9Y3B9 282 aaKnown RBP5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 VWDEQ8N2E2 1590 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 A0A0D9SFI3 127 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 STK3Q13188 491 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 BEND6Q5SZJ8 279 aaPredicted RBP5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 STOX1Q6ZVD7 989 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 CCDC191Q8NCU4 936 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 PDRG1Q9NUG6 133 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 HDAC5Q9UQL6 1122 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.35□□□□□ -1.552e-8■■□□□ 13.3
DEPDC1-202ENST00000456315 MYH8P13535 1937 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 NPHP3Q7Z494 1330 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 LMOD1P29536 600 aaPredicted RBP5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 DESI2Q9BSY9 194 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 LRRIQ3A6PVS8 624 aaPredicted RBP5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 EIF3CLB5ME19 914 aaKnown RBP5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 FOXN1O15353 648 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 MAP3K11Q16584 847 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 FBXW10Q5XX13 1052 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 PRPF40BQ6NWY9 871 aaKnown RBP5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 CHMP7Q8WUX9 453 aaPredicted RBP5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 EIF3CQ99613 913 aaKnown RBP5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 ANKZF1Q9H8Y5 726 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 PALLDQ8WX93 1383 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 NPATQ14207 1427 aa5.35□□□□□ -1.55
DEPDC1-202ENST00000456315 RSRC2Q7L4I2 434 aaKnown RBP5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 BORCS6Q96GS4 357 aa5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 ZSCAN16Q9H4T2 348 aaPredicted RBP5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 NCOA5Q9HCD5 579 aaKnown RBP5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 GEMIN8Q9NWZ8 242 aaKnown RBP5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 MYOM2P54296 1465 aa5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 ABCC3O15438 1527 aa5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 EXOC5O00471 708 aa5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 LRRFIP1Q32MZ4 808 aaKnown RBP5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 NUP62CLQ9H1M0 184 aa5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 MRPL44Q9H9J2 332 aaKnown RBP5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 ZSWIM6Q9HCJ5 1215 aa5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 A0A1B0GVL5 298 aa5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 CCDC192P0DO97 292 aa5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 CDK11BP21127 795 aaKnown RBP5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 FOSBP53539 338 aa5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 ANAPC15P60006 121 aa5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 GUCY1B3Q02153 619 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms