RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 RTFDC1Q9BY42 306 aaPredicted RBP22.93■■□□□ 1.26
MSH6-207ENST00000456246 CWC25Q9NXE8 425 aaPredicted RBP22.93■■□□□ 1.26
MSH6-207ENST00000456246 PCCAP05165 728 aaPredicted RBP22.92■■□□□ 1.26
MSH6-207ENST00000456246 NEXNQ0ZGT2 675 aa22.92■■□□□ 1.26
MSH6-207ENST00000456246 DPP8Q6V1X1 898 aaPredicted RBP22.92■■□□□ 1.26
MSH6-207ENST00000456246 MYH16Q9H6N6 1097 aa22.92■■□□□ 1.26
MSH6-207ENST00000456246 MAP3K2Q9Y2U5 619 aa22.92■■□□□ 1.26
MSH6-207ENST00000456246 SALL2Q9Y467 1007 aaPredicted RBP22.92■■□□□ 1.26
MSH6-207ENST00000456246 LRRC37AA6NMS7 1700 aa22.91■■□□□ 1.26
MSH6-207ENST00000456246 NIM1KQ8IY84 436 aa22.91■■□□□ 1.26
MSH6-207ENST00000456246 MPNDQ8N594 471 aa22.91■■□□□ 1.26
MSH6-207ENST00000456246 PI4KAP2A4QPH2 592 aa22.9■■□□□ 1.26
MSH6-207ENST00000456246 PPIP5K2O43314 1243 aa22.9■■□□□ 1.26
MSH6-207ENST00000456246 SLC4A2P04920 1241 aa22.9■■□□□ 1.26
MSH6-207ENST00000456246 PI4KAP1Q8N8J0 262 aa22.9■■□□□ 1.26
MSH6-207ENST00000456246 RTL5Q5HYW3 569 aaPredicted RBP22.89■■□□□ 1.25
MSH6-207ENST00000456246 ZNF428Q96B54 188 aa22.89■■□□□ 1.25
MSH6-207ENST00000456246 HACL1Q9UJ83 578 aa22.89■■□□□ 1.25
MSH6-207ENST00000456246 COL4A5P29400 1685 aa22.88■■□□□ 1.25
MSH6-207ENST00000456246 TAF1DQ9H5J8 278 aaPredicted RBP22.88■■□□□ 1.25
MSH6-207ENST00000456246 CDHR2Q9BYE9 1310 aa22.87■■□□□ 1.25
MSH6-207ENST00000456246 PDE8AO60658 829 aa22.87■■□□□ 1.25
MSH6-207ENST00000456246 FLIIQ13045 1269 aa22.87■■□□□ 1.25
MSH6-207ENST00000456246 CCDC152Q4G0S7 254 aa22.87■■□□□ 1.25
MSH6-207ENST00000456246 CHADLQ6NUI6 762 aa22.87■■□□□ 1.25
MSH6-207ENST00000456246 LDHDQ86WU2 507 aa22.87■■□□□ 1.25
MSH6-207ENST00000456246 VAMP4O75379 141 aa22.86■■□□□ 1.25
MSH6-207ENST00000456246 EXOSC9Q06265 439 aaKnown RBP22.86■■□□□ 1.25
MSH6-207ENST00000456246 KIAA2012Q0VF49 1180 aa22.86■■□□□ 1.25
MSH6-207ENST00000456246 AOC3Q16853 763 aa22.86■■□□□ 1.25
MSH6-207ENST00000456246 SLC51AQ86UW1 340 aa22.86■■□□□ 1.25
MSH6-207ENST00000456246 PNMA8AQ86V59 439 aaPredicted RBP22.86■■□□□ 1.25
MSH6-207ENST00000456246 TAF1P21675 1872 aa22.85■■□□□ 1.25
MSH6-207ENST00000456246 CELF1Q92879 486 aaKnown RBP22.85■■□□□ 1.25
MSH6-207ENST00000456246 IGKV5-2P06315 115 aa22.84■■□□□ 1.25
MSH6-207ENST00000456246 LMOD1P29536 600 aaPredicted RBP22.84■■□□□ 1.25
MSH6-207ENST00000456246 EPHX2P34913 555 aa22.84■■□□□ 1.25
MSH6-207ENST00000456246 RPS8P62241 208 aaKnown RBP22.84■■□□□ 1.25
MSH6-207ENST00000456246 FKBP5Q13451 457 aaPredicted RBP22.84■■□□□ 1.25
MSH6-207ENST00000456246 ZNRF3Q9ULT6 936 aa22.84■■□□□ 1.25
MSH6-207ENST00000456246 GJA3Q9Y6H8 435 aa22.84■■□□□ 1.25
MSH6-207ENST00000456246 NEURL1BA8MQ27 555 aa22.83■■□□□ 1.25
MSH6-207ENST00000456246 G2E3Q7L622 706 aa22.83■■□□□ 1.25
MSH6-207ENST00000456246 DUOX1Q9NRD9 1551 aa22.83■■□□□ 1.25
MSH6-207ENST00000456246 DNAJC5GQ8N7S2 189 aa22.82■■□□□ 1.24
MSH6-207ENST00000456246 DNAAF4Q8WXU2 420 aa22.82■■□□□ 1.24
MSH6-207ENST00000456246 NSFL1CQ9UNZ2 370 aaKnown RBP22.82■■□□□ 1.24
MSH6-207ENST00000456246 ZNF521Q96K83 1311 aa22.82■■□□□ 1.24
MSH6-207ENST00000456246 SPINK5Q9NQ38 1064 aaPredicted RBP22.81■■□□□ 1.24
MSH6-207ENST00000456246 CTSWP56202 376 aa22.8■■□□□ 1.24
MSH6-207ENST00000456246 EAPPQ56P03 285 aaPredicted RBP22.8■■□□□ 1.24
MSH6-207ENST00000456246 LINS1Q8NG48 757 aa22.8■■□□□ 1.24
MSH6-207ENST00000456246 EYA3Q99504 573 aa22.8■■□□□ 1.24
MSH6-207ENST00000456246 MYH3P11055 1940 aa22.8■■□□□ 1.24
MSH6-207ENST00000456246 ADAMTSL1Q8N6G6 1762 aa22.79■■□□□ 1.24
MSH6-207ENST00000456246 POTEIP0CG38 1075 aa22.79■■□□□ 1.24
MSH6-207ENST00000456246 POTEJP0CG39 1038 aa22.79■■□□□ 1.24
MSH6-207ENST00000456246 WASHC4Q2M389 1173 aa22.79■■□□□ 1.24
MSH6-207ENST00000456246 CWF19L2Q2TBE0 894 aaKnown RBP22.79■■□□□ 1.24
MSH6-207ENST00000456246 KLRG1Q96E93 195 aa22.79■■□□□ 1.24
MSH6-207ENST00000456246 CDC5LQ99459 802 aaKnown RBP22.79■■□□□ 1.24
MSH6-207ENST00000456246 RTL9Q8NET4 1388 aa22.78■■□□□ 1.24
MSH6-207ENST00000456246 SCNN1DP51172 638 aa22.78■■□□□ 1.24
MSH6-207ENST00000456246 GCKRQ14397 625 aa22.78■■□□□ 1.24
MSH6-207ENST00000456246 LTBP1Q14766 1721 aa22.78■■□□□ 1.24
MSH6-207ENST00000456246 TNIP1Q15025 636 aa22.78■■□□□ 1.24
MSH6-207ENST00000456246 CIAPIN1Q6FI81 312 aa22.78■■□□□ 1.24
MSH6-207ENST00000456246 ANKRD18AQ8IVF6 992 aa22.78■■□□□ 1.24
MSH6-207ENST00000456246 SEC31BQ9NQW1 1179 aa22.78■■□□□ 1.24
MSH6-207ENST00000456246 PODXL2Q9NZ53 605 aa22.78■■□□□ 1.24
MSH6-207ENST00000456246 C6orf229H3BNL8 230 aa22.77■■□□□ 1.24
MSH6-207ENST00000456246 H7C1W4 665 aa22.77■■□□□ 1.24
MSH6-207ENST00000456246 GPSM2P81274 684 aa22.77■■□□□ 1.24
MSH6-207ENST00000456246 CXCL9Q07325 125 aa22.77■■□□□ 1.24
MSH6-207ENST00000456246 JARID2Q92833 1246 aaPredicted RBP22.77■■□□□ 1.24
MSH6-207ENST00000456246 CLEC11AQ9Y240 323 aa22.77■■□□□ 1.24
MSH6-207ENST00000456246 COL4A1P02462 1669 aa22.77■■□□□ 1.24
MSH6-207ENST00000456246 CCER2I3L3R5 266 aa22.76■■□□□ 1.23
MSH6-207ENST00000456246 UBE3BQ7Z3V4 1068 aa22.76■■□□□ 1.23
MSH6-207ENST00000456246 PLA2G12BQ9BX93 195 aa22.76■■□□□ 1.23
MSH6-207ENST00000456246 E9PSI1 815 aa22.75■■□□□ 1.23
MSH6-207ENST00000456246 HTRA3P83110 453 aa22.75■■□□□ 1.23
MSH6-207ENST00000456246 USP50Q70EL3 339 aaPredicted RBP22.75■■□□□ 1.23
MSH6-207ENST00000456246 TTLL11Q8NHH1 800 aa22.75■■□□□ 1.23
MSH6-207ENST00000456246 TBC1D16Q8TBP0 767 aa22.75■■□□□ 1.23
MSH6-207ENST00000456246 CREBZFQ9NS37 354 aa22.75■■□□□ 1.23
MSH6-207ENST00000456246 POLLQ9UGP5 575 aa22.75■■□□□ 1.23
MSH6-207ENST00000456246 CCDC85AQ96PX6 553 aaPredicted RBP22.74■■□□□ 1.23
MSH6-207ENST00000456246 GPRC5DQ9NZD1 345 aa22.74■■□□□ 1.23
MSH6-207ENST00000456246 ANKIB1Q9P2G1 1089 aa22.74■■□□□ 1.23
MSH6-207ENST00000456246 GGA1Q9UJY5 639 aa22.74■■□□□ 1.23
MSH6-207ENST00000456246 PASKQ96RG2 1323 aa22.74■■□□□ 1.23
MSH6-207ENST00000456246 EPS15P42566 896 aa22.73■■□□□ 1.23
MSH6-207ENST00000456246 ZC3H12CQ9C0D7 883 aaKnown RBP22.73■■□□□ 1.23
MSH6-207ENST00000456246 ADARB2Q9NS39 739 aaKnown RBP22.73■■□□□ 1.23
MSH6-207ENST00000456246 XDHP47989 1333 aa22.73■■□□□ 1.23
MSH6-207ENST00000456246 UFL1O94874 794 aa22.72■■□□□ 1.23
MSH6-207ENST00000456246 JMYQ8N9B5 988 aa22.72■■□□□ 1.23
MSH6-207ENST00000456246 BCL2L13Q9BXK5 485 aa22.72■■□□□ 1.23
MSH6-207ENST00000456246 YDJCA8MPS7 323 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms