RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 CLEC11AQ9Y240 323 aa16.02■□□□□ 0.16
SMCR2-201ENST00000456090 ANP32CO43423 234 aa16.01■□□□□ 0.15
SMCR2-201ENST00000456090 TRIM28Q13263 835 aaKnown RBP16.01■□□□□ 0.15
SMCR2-201ENST00000456090 CCDC27Q2M243 656 aa16.01■□□□□ 0.15
SMCR2-201ENST00000456090 CCDC30Q5VVM6 783 aa16.01■□□□□ 0.15
SMCR2-201ENST00000456090 PNMA8AQ86V59 439 aaPredicted RBP16.01■□□□□ 0.15
SMCR2-201ENST00000456090 TSPYL6Q8N831 410 aa16.01■□□□□ 0.15
SMCR2-201ENST00000456090 SUPT20HQ8NEM7 779 aa16.01■□□□□ 0.15
SMCR2-201ENST00000456090 RTFDC1Q9BY42 306 aaPredicted RBP16.01■□□□□ 0.15
SMCR2-201ENST00000456090 MRS2Q9HD23 443 aa16.01■□□□□ 0.15
SMCR2-201ENST00000456090 COL4A1P02462 1669 aa16.01■□□□□ 0.15
SMCR2-201ENST00000456090 DUOX1Q9NRD9 1551 aa16■□□□□ 0.15
SMCR2-201ENST00000456090 WWC1Q8IX03 1113 aa16■□□□□ 0.15
SMCR2-201ENST00000456090 MPNDQ8N594 471 aa16■□□□□ 0.15
SMCR2-201ENST00000456090 MYD88Q99836 296 aa16■□□□□ 0.15
SMCR2-201ENST00000456090 CHMP4AQ9BY43 222 aa16■□□□□ 0.15
SMCR2-201ENST00000456090 VPS33BQ9H267 617 aa16■□□□□ 0.15
SMCR2-201ENST00000456090 CREBZFQ9NS37 354 aa16■□□□□ 0.15
SMCR2-201ENST00000456090 TRPM7Q96QT4 1865 aa15.99■□□□□ 0.15
SMCR2-201ENST00000456090 PASKQ96RG2 1323 aa15.99■□□□□ 0.15
SMCR2-201ENST00000456090 SPEF2Q9C093 1822 aa15.99■□□□□ 0.15
SMCR2-201ENST00000456090 IRS4O14654 1257 aaPredicted RBP15.99■□□□□ 0.15
SMCR2-201ENST00000456090 LMOD1P29536 600 aaPredicted RBP15.99■□□□□ 0.15
SMCR2-201ENST00000456090 SF3B3Q15393 1217 aaKnown RBP15.99■□□□□ 0.15
SMCR2-201ENST00000456090 TMC4Q7Z404 712 aa15.99■□□□□ 0.15
SMCR2-201ENST00000456090 SCNN1DP51172 638 aa15.98■□□□□ 0.15
SMCR2-201ENST00000456090 ZBTB38Q8NAP3 1195 aaPredicted RBP15.98■□□□□ 0.15
SMCR2-201ENST00000456090 CELF1Q92879 486 aaKnown RBP15.98■□□□□ 0.15
SMCR2-201ENST00000456090 ZNRF3Q9ULT6 936 aa15.98■□□□□ 0.15
SMCR2-201ENST00000456090 DDX58O95786 925 aaKnown RBP15.97■□□□□ 0.15
SMCR2-201ENST00000456090 ITGBL1O95965 494 aaPredicted RBP15.97■□□□□ 0.15
SMCR2-201ENST00000456090 EPS15P42566 896 aa15.97■□□□□ 0.15
SMCR2-201ENST00000456090 KIAA2012Q0VF49 1180 aa15.97■□□□□ 0.15
SMCR2-201ENST00000456090 MAP1SQ66K74 1059 aaPredicted RBP15.97■□□□□ 0.15
SMCR2-201ENST00000456090 CCDC191Q8NCU4 936 aa15.97■□□□□ 0.15
SMCR2-201ENST00000456090 METTL22Q9BUU2 404 aaPredicted RBP15.97■□□□□ 0.15
SMCR2-201ENST00000456090 CXCL9Q07325 125 aa15.96■□□□□ 0.15
SMCR2-201ENST00000456090 IFFO2Q5TF58 517 aa15.96■□□□□ 0.15
SMCR2-201ENST00000456090 CNTROBQ8N137 903 aa15.96■□□□□ 0.15
SMCR2-201ENST00000456090 CWC25Q9NXE8 425 aaPredicted RBP15.96■□□□□ 0.15
SMCR2-201ENST00000456090 MAP3K2Q9Y2U5 619 aa15.96■□□□□ 0.15
SMCR2-201ENST00000456090 IL16Q14005 1332 aa15.95■□□□□ 0.14
SMCR2-201ENST00000456090 HSP90B1P14625 803 aaKnown RBP15.95■□□□□ 0.14
SMCR2-201ENST00000456090 TWISTNBQ3B726 338 aaPredicted RBP15.95■□□□□ 0.14
SMCR2-201ENST00000456090 JARID2Q92833 1246 aaPredicted RBP15.95■□□□□ 0.14
SMCR2-201ENST00000456090 STK31Q9BXU1 1019 aa15.95■□□□□ 0.14
SMCR2-201ENST00000456090 MKRN1Q9UHC7 482 aaKnown RBP15.95■□□□□ 0.14
SMCR2-201ENST00000456090 NSFL1CQ9UNZ2 370 aaKnown RBP15.95■□□□□ 0.14
SMCR2-201ENST00000456090 SALL2Q9Y467 1007 aaPredicted RBP15.95■□□□□ 0.14
SMCR2-201ENST00000456090 POLR2AP24928 1970 aaKnown RBP15.95■□□□□ 0.14
SMCR2-201ENST00000456090 PI4KAP2A4QPH2 592 aa15.94■□□□□ 0.14
SMCR2-201ENST00000456090 TMEM88BA6NKF7 163 aa15.94■□□□□ 0.14
SMCR2-201ENST00000456090 RAD17O75943 681 aa15.94■□□□□ 0.14
SMCR2-201ENST00000456090 PCCAP05165 728 aaPredicted RBP15.94■□□□□ 0.14
SMCR2-201ENST00000456090 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
SMCR2-201ENST00000456090 CIAPIN1Q6FI81 312 aa15.94■□□□□ 0.14
SMCR2-201ENST00000456090 KSR2Q6VAB6 950 aa15.94■□□□□ 0.14
SMCR2-201ENST00000456090 PI4KAP1Q8N8J0 262 aa15.94■□□□□ 0.14
SMCR2-201ENST00000456090 SCN9AQ15858 1988 aa15.94■□□□□ 0.14
SMCR2-201ENST00000456090 RPS8P62241 208 aaKnown RBP15.93■□□□□ 0.14
SMCR2-201ENST00000456090 GPSM2P81274 684 aa15.93■□□□□ 0.14
SMCR2-201ENST00000456090 WASHC4Q2M389 1173 aa15.93■□□□□ 0.14
SMCR2-201ENST00000456090 USP50Q70EL3 339 aaPredicted RBP15.93■□□□□ 0.14
SMCR2-201ENST00000456090 SEC31BQ9NQW1 1179 aa15.93■□□□□ 0.14
SMCR2-201ENST00000456090 GPRC5DQ9NZD1 345 aa15.93■□□□□ 0.14
SMCR2-201ENST00000456090 CNTNAP1P78357 1384 aa15.92■□□□□ 0.14
SMCR2-201ENST00000456090 YDJCA8MPS7 323 aa15.92■□□□□ 0.14
SMCR2-201ENST00000456090 C6orf229H3BNL8 230 aa15.92■□□□□ 0.14
SMCR2-201ENST00000456090 PDE8AO60658 829 aa15.92■□□□□ 0.14
SMCR2-201ENST00000456090 GMPSP49915 693 aaPredicted RBP15.92■□□□□ 0.14
SMCR2-201ENST00000456090 CCDC152Q4G0S7 254 aa15.92■□□□□ 0.14
SMCR2-201ENST00000456090 CCDC85AQ96PX6 553 aaPredicted RBP15.92■□□□□ 0.14
SMCR2-201ENST00000456090 ADARB2Q9NS39 739 aaKnown RBP15.92■□□□□ 0.14
SMCR2-201ENST00000456090 POLLQ9UGP5 575 aa15.92■□□□□ 0.14
SMCR2-201ENST00000456090 FANCIQ9NVI1 1328 aa15.92■□□□□ 0.14
SMCR2-201ENST00000456090 PSME4Q14997 1843 aa15.91■□□□□ 0.14
SMCR2-201ENST00000456090 RIMBP2O15034 1052 aa15.91■□□□□ 0.14
SMCR2-201ENST00000456090 SLC4A2P04920 1241 aa15.91■□□□□ 0.14
SMCR2-201ENST00000456090 IGKV5-2P06315 115 aa15.91■□□□□ 0.14
SMCR2-201ENST00000456090 HSPA1AP0DMV8 641 aaKnown RBP15.91■□□□□ 0.14
SMCR2-201ENST00000456090 HSPA1BP0DMV9 641 aaKnown RBP15.91■□□□□ 0.14
SMCR2-201ENST00000456090 NEXNQ0ZGT2 675 aa15.91■□□□□ 0.14
SMCR2-201ENST00000456090 TNIP1Q15025 636 aa15.91■□□□□ 0.14
SMCR2-201ENST00000456090 G2E3Q7L622 706 aa15.91■□□□□ 0.14
SMCR2-201ENST00000456090 BCL2L13Q9BXK5 485 aa15.91■□□□□ 0.14
SMCR2-201ENST00000456090 CWF19L2Q2TBE0 894 aaKnown RBP15.9■□□□□ 0.14
SMCR2-201ENST00000456090 WDR63Q8IWG1 891 aa15.9■□□□□ 0.14
SMCR2-201ENST00000456090 DBNDD1Q9H9R9 158 aa15.9■□□□□ 0.14
SMCR2-201ENST00000456090 CDHR2Q9BYE9 1310 aa15.9■□□□□ 0.14
SMCR2-201ENST00000456090 FAM9BQ8IZU0 186 aa15.89■□□□□ 0.13
SMCR2-201ENST00000456090 TBC1D16Q8TBP0 767 aa15.89■□□□□ 0.13
SMCR2-201ENST00000456090 GPR101Q96P66 508 aaPredicted RBP15.89■□□□□ 0.13
SMCR2-201ENST00000456090 EYA3Q99504 573 aa15.89■□□□□ 0.13
SMCR2-201ENST00000456090 ANKIB1Q9P2G1 1089 aa15.89■□□□□ 0.13
SMCR2-201ENST00000456090 NEURL1BA8MQ27 555 aa15.88■□□□□ 0.13
SMCR2-201ENST00000456090 PSMD14O00487 310 aa15.88■□□□□ 0.13
SMCR2-201ENST00000456090 ECE2O60344 883 aa15.88■□□□□ 0.13
SMCR2-201ENST00000456090 CTSWP56202 376 aa15.88■□□□□ 0.13
SMCR2-201ENST00000456090 FMR1Q06787 632 aaKnown RBP eCLIP15.88■□□□□ 0.13
SMCR2-201ENST00000456090 FLIIQ13045 1269 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms