RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 CTSWP56202 376 aa18.59■□□□□ 0.57
CLCN1-203ENST00000455478 OLFM4Q6UX06 510 aa18.59■□□□□ 0.57
CLCN1-203ENST00000455478 ATF7IPQ6VMQ6 1270 aa18.59■□□□□ 0.57
CLCN1-203ENST00000455478 TTLL11Q8NHH1 800 aa18.59■□□□□ 0.57
CLCN1-203ENST00000455478 C9orf78Q9NZ63 289 aaPredicted RBP18.59■□□□□ 0.57
CLCN1-203ENST00000455478 MYH3P11055 1940 aa18.59■□□□□ 0.57
CLCN1-203ENST00000455478 BBOX1O75936 387 aa18.58■□□□□ 0.56
CLCN1-203ENST00000455478 NBPF7P0C2Y1 421 aaPredicted RBP18.58■□□□□ 0.56
CLCN1-203ENST00000455478 CCT4P50991 539 aaKnown RBP18.58■□□□□ 0.56
CLCN1-203ENST00000455478 GRAPQ13588 217 aa18.58■□□□□ 0.56
CLCN1-203ENST00000455478 SLC51AQ86UW1 340 aa18.58■□□□□ 0.56
CLCN1-203ENST00000455478 GRAPLQ8TC17 118 aaPredicted RBP18.58■□□□□ 0.56
CLCN1-203ENST00000455478 USP44Q9H0E7 712 aa18.58■□□□□ 0.56
CLCN1-203ENST00000455478 SEC31BQ9NQW1 1179 aa18.58■□□□□ 0.56
CLCN1-203ENST00000455478 COL4A1P02462 1669 aa18.57■□□□□ 0.56
CLCN1-203ENST00000455478 PPEF1O14829 653 aaPredicted RBP18.57■□□□□ 0.56
CLCN1-203ENST00000455478 CSF1RP07333 972 aa18.57■□□□□ 0.56
CLCN1-203ENST00000455478 FOXO4P98177 505 aa18.57■□□□□ 0.56
CLCN1-203ENST00000455478 CCDC152Q4G0S7 254 aa18.57■□□□□ 0.56
CLCN1-203ENST00000455478 ZKSCAN2Q63HK3 967 aa18.57■□□□□ 0.56
CLCN1-203ENST00000455478 INTS3Q68E01 1043 aaKnown RBP18.57■□□□□ 0.56
CLCN1-203ENST00000455478 CELF1Q92879 486 aaKnown RBP18.57■□□□□ 0.56
CLCN1-203ENST00000455478 CCDC85AQ96PX6 553 aaPredicted RBP18.57■□□□□ 0.56
CLCN1-203ENST00000455478 RCAN3Q9UKA8 241 aa18.57■□□□□ 0.56
CLCN1-203ENST00000455478 FER1L6Q2WGJ9 1857 aa18.56■□□□□ 0.56
CLCN1-203ENST00000455478 NFKBIEO00221 500 aa18.56■□□□□ 0.56
CLCN1-203ENST00000455478 EPHA10Q5JZY3 1008 aa18.56■□□□□ 0.56
CLCN1-203ENST00000455478 SOGA3Q5TF21 947 aa18.56■□□□□ 0.56
CLCN1-203ENST00000455478 KAZALD1Q96I82 304 aa18.56■□□□□ 0.56
CLCN1-203ENST00000455478 SBF1O95248 1867 aa18.55■□□□□ 0.56
CLCN1-203ENST00000455478 RASSF7Q02833 373 aa18.55■□□□□ 0.56
CLCN1-203ENST00000455478 CCDC93Q567U6 631 aa18.55■□□□□ 0.56
CLCN1-203ENST00000455478 CLUAP1Q96AJ1 413 aa18.55■□□□□ 0.56
CLCN1-203ENST00000455478 SUCLG2Q96I99 432 aa18.55■□□□□ 0.56
CLCN1-203ENST00000455478 GREM2Q9H772 168 aa18.55■□□□□ 0.56
CLCN1-203ENST00000455478 ATP6V0A2Q9Y487 856 aa18.55■□□□□ 0.56
CLCN1-203ENST00000455478 SNED1Q8TER0 1413 aa18.55■□□□□ 0.56
CLCN1-203ENST00000455478 RTL9Q8NET4 1388 aa18.55■□□□□ 0.56
CLCN1-203ENST00000455478 PRELPP51888 382 aa18.54■□□□□ 0.56
CLCN1-203ENST00000455478 RPS8P62241 208 aaKnown RBP18.54■□□□□ 0.56
CLCN1-203ENST00000455478 CC2D2BQ6DHV5 1058 aa18.54■□□□□ 0.56
CLCN1-203ENST00000455478 SP8Q8IXZ3 490 aa18.54■□□□□ 0.56
CLCN1-203ENST00000455478 RTKN2Q8IZC4 609 aa18.53■□□□□ 0.56
CLCN1-203ENST00000455478 LTBP3Q9NS15 1303 aa18.52■□□□□ 0.56
CLCN1-203ENST00000455478 LMBR1LQ6UX01 489 aa18.52■□□□□ 0.56
CLCN1-203ENST00000455478 TMC4Q7Z404 712 aa18.52■□□□□ 0.56
CLCN1-203ENST00000455478 CCDC88AQ3V6T2 1871 aa18.52■□□□□ 0.55
CLCN1-203ENST00000455478 RLBP1P12271 317 aa18.51■□□□□ 0.55
CLCN1-203ENST00000455478 FAM161AQ3B820 660 aa18.51■□□□□ 0.55
CLCN1-203ENST00000455478 DZIP1LQ8IYY4 767 aaKnown RBP18.51■□□□□ 0.55
CLCN1-203ENST00000455478 TMEM57Q8N5G2 664 aa18.51■□□□□ 0.55
CLCN1-203ENST00000455478 TAOK3Q9H2K8 898 aa18.51■□□□□ 0.55
CLCN1-203ENST00000455478 ITGA6P23229 1130 aa18.5■□□□□ 0.55
CLCN1-203ENST00000455478 FKBP4Q02790 459 aaKnown RBP eCLIP18.5■□□□□ 0.55
CLCN1-203ENST00000455478 GRIPAP1Q4V328 841 aa18.5■□□□□ 0.55
CLCN1-203ENST00000455478 C9orf131Q5VYM1 1079 aa18.5■□□□□ 0.55
CLCN1-203ENST00000455478 ANKRD18AQ8IVF6 992 aa18.5■□□□□ 0.55
CLCN1-203ENST00000455478 CDC5LQ99459 802 aaKnown RBP18.5■□□□□ 0.55
CLCN1-203ENST00000455478 MEIS3Q99687 375 aa18.5■□□□□ 0.55
CLCN1-203ENST00000455478 LMNB1P20700 586 aa18.49■□□□□ 0.55
CLCN1-203ENST00000455478 YY1P25490 414 aa18.49■□□□□ 0.55
CLCN1-203ENST00000455478 RABL6Q3YEC7 729 aaPredicted RBP18.49■□□□□ 0.55
CLCN1-203ENST00000455478 ANKRD44Q8N8A2 993 aa18.49■□□□□ 0.55
CLCN1-203ENST00000455478 PSMD1Q99460 953 aa18.49■□□□□ 0.55
CLCN1-203ENST00000455478 BICC1Q9H694 974 aaKnown RBP18.49■□□□□ 0.55
CLCN1-203ENST00000455478 LRRC37AA6NMS7 1700 aa18.49■□□□□ 0.55
CLCN1-203ENST00000455478 PLIN1O60240 522 aa18.48■□□□□ 0.55
CLCN1-203ENST00000455478 UBTFL1P0CB47 393 aaPredicted RBP18.48■□□□□ 0.55
CLCN1-203ENST00000455478 TMX4Q9H1E5 349 aaPredicted RBP18.48■□□□□ 0.55
CLCN1-203ENST00000455478 RNF181Q9P0P0 153 aa18.48■□□□□ 0.55
CLCN1-203ENST00000455478 ANKRD18BA2A2Z9 1011 aa18.47■□□□□ 0.55
CLCN1-203ENST00000455478 IFIT5Q13325 482 aaKnown RBP18.47■□□□□ 0.55
CLCN1-203ENST00000455478 FTSJ3Q8IY81 847 aaKnown RBP18.47■□□□□ 0.55
CLCN1-203ENST00000455478 MPNDQ8N594 471 aa18.47■□□□□ 0.55
CLCN1-203ENST00000455478 PANK1Q8TE04 598 aa18.47■□□□□ 0.55
CLCN1-203ENST00000455478 ZNF277Q9NRM2 450 aaPredicted RBP18.47■□□□□ 0.55
CLCN1-203ENST00000455478 BSDC1Q9NW68 430 aaPredicted RBP18.47■□□□□ 0.55
CLCN1-203ENST00000455478 CHMP3Q9Y3E7 222 aa18.47■□□□□ 0.55
CLCN1-203ENST00000455478 GNAI3P08754 354 aa18.46■□□□□ 0.55
CLCN1-203ENST00000455478 GPSM2P81274 684 aa18.46■□□□□ 0.55
CLCN1-203ENST00000455478 DPP8Q6V1X1 898 aaPredicted RBP18.46■□□□□ 0.55
CLCN1-203ENST00000455478 RTFDC1Q9BY42 306 aaPredicted RBP18.46■□□□□ 0.55
CLCN1-203ENST00000455478 SPEF2Q9C093 1822 aa18.46■□□□□ 0.55
CLCN1-203ENST00000455478 DICER1Q9UPY3 1922 aaKnown RBP18.45■□□□□ 0.54
CLCN1-203ENST00000455478 IGHMBP2P38935 993 aaKnown RBP18.45■□□□□ 0.54
CLCN1-203ENST00000455478 CCDC57Q2TAC2 916 aa18.45■□□□□ 0.54
CLCN1-203ENST00000455478 ZNF594Q96JF6 807 aaPredicted RBP18.45■□□□□ 0.54
CLCN1-203ENST00000455478 MINPP1Q9UNW1 487 aa18.45■□□□□ 0.54
CLCN1-203ENST00000455478 NSFL1CQ9UNZ2 370 aaKnown RBP18.45■□□□□ 0.54
CLCN1-203ENST00000455478 LRRFIP2Q9Y608 721 aaKnown RBP18.45■□□□□ 0.54
CLCN1-203ENST00000455478 MS4A1P11836 297 aa18.44■□□□□ 0.54
CLCN1-203ENST00000455478 PODXL2Q9NZ53 605 aa18.44■□□□□ 0.54
CLCN1-203ENST00000455478 HDAC5Q9UQL6 1122 aa18.44■□□□□ 0.54
CLCN1-203ENST00000455478 LTBP1Q14766 1721 aa18.43■□□□□ 0.54
CLCN1-203ENST00000455478 DUOX1Q9NRD9 1551 aa18.43■□□□□ 0.54
CLCN1-203ENST00000455478 ZBTB7BO15156 539 aaPredicted RBP18.43■□□□□ 0.54
CLCN1-203ENST00000455478 IARSP41252 1262 aaKnown RBP18.43■□□□□ 0.54
CLCN1-203ENST00000455478 ITPRIPQ8IWB1 547 aa18.43■□□□□ 0.54
CLCN1-203ENST00000455478 MPHOSPH8Q99549 860 aa18.43■□□□□ 0.54
CLCN1-203ENST00000455478 POLLQ9UGP5 575 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms