RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 ZNF512BQ96KM6 892 aaPredicted RBP8.33□□□□□ -1.08
ECHDC1-210ENST00000454859 UTP14AQ9BVJ6 771 aaKnown RBP8.33□□□□□ -1.08
ECHDC1-210ENST00000454859 SNRKQ9NRH2 765 aa8.33□□□□□ -1.08
ECHDC1-210ENST00000454859 SMARCA5O60264 1052 aaPredicted RBP8.32□□□□□ -1.08
ECHDC1-210ENST00000454859 IFIT5Q13325 482 aaKnown RBP8.32□□□□□ -1.08
ECHDC1-210ENST00000454859 ITPK1Q13572 414 aa8.32□□□□□ -1.08
ECHDC1-210ENST00000454859 SLC10A5Q5PT55 438 aa8.32□□□□□ -1.08
ECHDC1-210ENST00000454859 TMED8Q6PL24 325 aaPredicted RBP8.32□□□□□ -1.08
ECHDC1-210ENST00000454859 C16orf71Q8IYS4 520 aaPredicted RBP8.32□□□□□ -1.08
ECHDC1-210ENST00000454859 NARFQ9UHQ1 456 aa8.32□□□□□ -1.08
ECHDC1-210ENST00000454859 UBR3Q6ZT12 1888 aa8.32□□□□□ -1.08
ECHDC1-210ENST00000454859 CTSWP56202 376 aa8.32□□□□□ -1.08
ECHDC1-210ENST00000454859 RABEP1Q15276 862 aa8.32□□□□□ -1.08
ECHDC1-210ENST00000454859 TNNI3KQ59H18 835 aa8.32□□□□□ -1.08
ECHDC1-210ENST00000454859 EPHA10Q5JZY3 1008 aa8.32□□□□□ -1.08
ECHDC1-210ENST00000454859 ACSBG1Q96GR2 724 aa8.32□□□□□ -1.08
ECHDC1-210ENST00000454859 FPGT-TNNI3KV9GXZ4 949 aa8.32□□□□□ -1.08
ECHDC1-210ENST00000454859 MROH5Q6ZUA9 1318 aa8.32□□□□□ -1.08
ECHDC1-210ENST00000454859 ANKRD18BA2A2Z9 1011 aa8.31□□□□□ -1.08
ECHDC1-210ENST00000454859 CHMLP26374 656 aa8.31□□□□□ -1.08
ECHDC1-210ENST00000454859 MCM2P49736 904 aa8.31□□□□□ -1.08
ECHDC1-210ENST00000454859 AACSQ86V21 672 aa8.31□□□□□ -1.08
ECHDC1-210ENST00000454859 ESYT1Q9BSJ8 1104 aa8.31□□□□□ -1.08
ECHDC1-210ENST00000454859 CEP126Q9P2H0 1117 aa8.31□□□□□ -1.08
ECHDC1-210ENST00000454859 C4AP0C0L4 1744 aa8.31□□□□□ -1.08
ECHDC1-210ENST00000454859 QSER1Q2KHR3 1735 aa8.31□□□□□ -1.08
ECHDC1-210ENST00000454859 IRS4O14654 1257 aaPredicted RBP8.31□□□□□ -1.08
ECHDC1-210ENST00000454859 KRT27Q7Z3Y8 459 aa8.31□□□□□ -1.08
ECHDC1-210ENST00000454859 TTLL11Q8NHH1 800 aa8.31□□□□□ -1.08
ECHDC1-210ENST00000454859 USP26Q9BXU7 913 aa8.31□□□□□ -1.08
ECHDC1-210ENST00000454859 TRMT112Q9UI30 125 aaKnown RBP8.31□□□□□ -1.08
ECHDC1-210ENST00000454859 RTCBQ9Y3I0 505 aaKnown RBP8.31□□□□□ -1.08
ECHDC1-210ENST00000454859 ZNF609O15014 1411 aa8.31□□□□□ -1.08
ECHDC1-210ENST00000454859 MFAP1P55081 439 aaKnown RBP8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 CCDC152Q4G0S7 254 aa8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 CDC5LQ99459 802 aaKnown RBP8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 CCNL1Q9UK58 526 aaPredicted RBP8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 CASZ1Q86V15 1759 aa8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 A0A0G2JS52 829 aa8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 PLSCR1O15162 318 aa8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 KCNQ2O43526 872 aa8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 SEC24BO95487 1268 aa8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 PIP4K2AP48426 406 aaPredicted RBP8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 MYT1Q01538 1121 aa8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 SF3B3Q15393 1217 aaKnown RBP8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 HLFQ16534 295 aa8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 ERICH6Q7L0X2 663 aa8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 ATG9AQ7Z3C6 839 aa8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 LINC00116Q8NCU8 138 aa8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 FLAD1Q8NFF5 587 aa8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 OTUD7AQ8TE49 926 aaPredicted RBP8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 EAF2Q96CJ1 260 aaPredicted RBP8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 IL1RAPL2Q9NP60 686 aa8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 MYH7P12883 1935 aa8.3□□□□□ -1.08
ECHDC1-210ENST00000454859 TRIM6-TRIM34B2RNG4 842 aa8.29□□□□□ -1.08
ECHDC1-210ENST00000454859 APBB1O00213 710 aa8.29□□□□□ -1.08
ECHDC1-210ENST00000454859 SSFA2P28290 1259 aa8.29□□□□□ -1.08
ECHDC1-210ENST00000454859 TAF7LQ5H9L4 462 aa8.29□□□□□ -1.08
ECHDC1-210ENST00000454859 HAUS7Q99871 368 aa8.29□□□□□ -1.08
ECHDC1-210ENST00000454859 PA2G4Q9UQ80 394 aaKnown RBP8.29□□□□□ -1.08
ECHDC1-210ENST00000454859 ZPR1O75312 459 aa8.29□□□□□ -1.08
ECHDC1-210ENST00000454859 NTSR2O95665 410 aa8.29□□□□□ -1.08
ECHDC1-210ENST00000454859 RIPOR2Q9Y4F9 1068 aa8.29□□□□□ -1.08
ECHDC1-210ENST00000454859 SGSM2O43147 1006 aa8.28□□□□□ -1.08
ECHDC1-210ENST00000454859 ZFYP08048 801 aaPredicted RBP8.28□□□□□ -1.08
ECHDC1-210ENST00000454859 UQCRFS1P1P0C7P4 283 aa8.28□□□□□ -1.08
ECHDC1-210ENST00000454859 TFCP2Q12800 502 aa8.28□□□□□ -1.08
ECHDC1-210ENST00000454859 CCDC158Q5M9N0 1113 aa8.28□□□□□ -1.08
ECHDC1-210ENST00000454859 KIAA1211Q6ZU35 1233 aa8.28□□□□□ -1.08
ECHDC1-210ENST00000454859 NUTM1Q86Y26 1132 aa8.28□□□□□ -1.08
ECHDC1-210ENST00000454859 HSCBQ8IWL3 235 aa8.28□□□□□ -1.08
ECHDC1-210ENST00000454859 DIAPH3Q9NSV4 1193 aa8.28□□□□□ -1.08
ECHDC1-210ENST00000454859 TBC1D2BQ9UPU7 963 aa8.28□□□□□ -1.08
ECHDC1-210ENST00000454859 A0A1B0GUL6 1792 aa8.28□□□□□ -1.08
ECHDC1-210ENST00000454859 UBN2Q6ZU65 1347 aa8.28□□□□□ -1.08
ECHDC1-210ENST00000454859 KCNB2Q92953 911 aa8.28□□□□□ -1.08
ECHDC1-210ENST00000454859 FAM89AQ96GI7 184 aa8.28□□□□□ -1.08
ECHDC1-210ENST00000454859 CIZ1Q9ULV3 898 aaPredicted RBP8.28□□□□□ -1.08
ECHDC1-210ENST00000454859 NIP7Q9Y221 180 aaKnown RBP eCLIP8.28□□□□□ -1.08
ECHDC1-210ENST00000454859 ZNF330Q9Y3S2 320 aaPredicted RBP8.28□□□□□ -1.08
ECHDC1-210ENST00000454859 ST18O60284 1047 aa8.27□□□□□ -1.09
ECHDC1-210ENST00000454859 ITGA6P23229 1130 aa8.27□□□□□ -1.09
ECHDC1-210ENST00000454859 TTF1Q15361 905 aaPredicted RBP8.27□□□□□ -1.09
ECHDC1-210ENST00000454859 TRAPPC3LQ5T215 181 aa8.27□□□□□ -1.09
ECHDC1-210ENST00000454859 SUSD4Q5VX71 490 aa8.27□□□□□ -1.09
ECHDC1-210ENST00000454859 TPTE2Q6XPS3 522 aa8.27□□□□□ -1.09
ECHDC1-210ENST00000454859 RILPL2Q969X0 211 aa8.27□□□□□ -1.09
ECHDC1-210ENST00000454859 SETDB2Q96T68 719 aa8.27□□□□□ -1.09
ECHDC1-210ENST00000454859 CHMP3Q9Y3E7 222 aa8.27□□□□□ -1.09
ECHDC1-210ENST00000454859 CARMIL3Q8ND23 1372 aa8.27□□□□□ -1.09
ECHDC1-210ENST00000454859 PDIA4P13667 645 aaKnown RBP8.26□□□□□ -1.09
ECHDC1-210ENST00000454859 IGHMBP2P38935 993 aaKnown RBP8.26□□□□□ -1.09
ECHDC1-210ENST00000454859 ZSCAN25Q6NSZ9 544 aa8.26□□□□□ -1.09
ECHDC1-210ENST00000454859 LDHAL6AQ6ZMR3 332 aa8.26□□□□□ -1.09
ECHDC1-210ENST00000454859 TM6SF1Q9BZW5 370 aa8.26□□□□□ -1.09
ECHDC1-210ENST00000454859 HELLSQ9NRZ9 838 aa8.26□□□□□ -1.09
ECHDC1-210ENST00000454859 HMG20BQ9P0W2 317 aa8.26□□□□□ -1.09
ECHDC1-210ENST00000454859 DBNLQ9UJU6 430 aaKnown RBP8.26□□□□□ -1.09
ECHDC1-210ENST00000454859 DUOX1Q9NRD9 1551 aa8.26□□□□□ -1.09
ECHDC1-210ENST00000454859 TNS1Q9HBL0 1735 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms