RNA–Protein interactions for RNA: ENST00000454141.5

SEC22C-212, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-212ENST00000454141 TRIM28Q13263 835 aaKnown RBP23.67■■□□□ 1.38
SEC22C-212ENST00000454141 MPNDQ8N594 471 aa23.67■■□□□ 1.38
SEC22C-212ENST00000454141 PHAXQ9H814 394 aaKnown RBP23.67■■□□□ 1.38
SEC22C-212ENST00000454141 SCNN1DP51172 638 aa23.66■■□□□ 1.38
SEC22C-212ENST00000454141 TMC4Q7Z404 712 aa23.66■■□□□ 1.38
SEC22C-212ENST00000454141 ITGBL1O95965 494 aaPredicted RBP23.65■■□□□ 1.38
SEC22C-212ENST00000454141 SF3B3Q15393 1217 aaKnown RBP23.65■■□□□ 1.38
SEC22C-212ENST00000454141 RTL5Q5HYW3 569 aaPredicted RBP23.65■■□□□ 1.38
SEC22C-212ENST00000454141 CHMP4AQ9BY43 222 aa23.65■■□□□ 1.38
SEC22C-212ENST00000454141 LTBP1Q14766 1721 aa23.64■■□□□ 1.38
SEC22C-212ENST00000454141 CCDC30Q5VVM6 783 aa23.64■■□□□ 1.37
SEC22C-212ENST00000454141 LRRC37AA6NMS7 1700 aa23.63■■□□□ 1.37
SEC22C-212ENST00000454141 IRS4O14654 1257 aaPredicted RBP23.63■■□□□ 1.37
SEC22C-212ENST00000454141 KIAA2012Q0VF49 1180 aa23.63■■□□□ 1.37
SEC22C-212ENST00000454141 CCDC27Q2M243 656 aa23.63■■□□□ 1.37
SEC22C-212ENST00000454141 ZNRF3Q9ULT6 936 aa23.63■■□□□ 1.37
SEC22C-212ENST00000454141 DUOX1Q9NRD9 1551 aa23.62■■□□□ 1.37
SEC22C-212ENST00000454141 EPS15P42566 896 aa23.62■■□□□ 1.37
SEC22C-212ENST00000454141 MAP1SQ66K74 1059 aaPredicted RBP23.62■■□□□ 1.37
SEC22C-212ENST00000454141 TSPYL6Q8N831 410 aa23.62■■□□□ 1.37
SEC22C-212ENST00000454141 ZBTB38Q8NAP3 1195 aaPredicted RBP23.62■■□□□ 1.37
SEC22C-212ENST00000454141 TSR2Q969E8 191 aaKnown RBP23.62■■□□□ 1.37
SEC22C-212ENST00000454141 MYD88Q99836 296 aa23.62■■□□□ 1.37
SEC22C-212ENST00000454141 MKRN1Q9UHC7 482 aaKnown RBP23.62■■□□□ 1.37
SEC22C-212ENST00000454141 CXCL9Q07325 125 aa23.61■■□□□ 1.37
SEC22C-212ENST00000454141 CNTROBQ8N137 903 aa23.61■■□□□ 1.37
SEC22C-212ENST00000454141 CELF1Q92879 486 aaKnown RBP23.61■■□□□ 1.37
SEC22C-212ENST00000454141 TMEM88BA6NKF7 163 aa23.6■■□□□ 1.37
SEC22C-212ENST00000454141 DDX58O95786 925 aaKnown RBP23.6■■□□□ 1.37
SEC22C-212ENST00000454141 WWC1Q8IX03 1113 aa23.6■■□□□ 1.37
SEC22C-212ENST00000454141 MRS2Q9HD23 443 aa23.6■■□□□ 1.37
SEC22C-212ENST00000454141 CNTNAP1P78357 1384 aa23.6■■□□□ 1.37
SEC22C-212ENST00000454141 HSPA1AP0DMV8 641 aaKnown RBP23.59■■□□□ 1.37
SEC22C-212ENST00000454141 HSPA1BP0DMV9 641 aaKnown RBP23.59■■□□□ 1.37
SEC22C-212ENST00000454141 HSP90B1P14625 803 aaKnown RBP23.59■■□□□ 1.37
SEC22C-212ENST00000454141 USP50Q70EL3 339 aaPredicted RBP23.59■■□□□ 1.37
SEC22C-212ENST00000454141 CCDC191Q8NCU4 936 aa23.59■■□□□ 1.37
SEC22C-212ENST00000454141 TAF1P21675 1872 aa23.58■■□□□ 1.37
SEC22C-212ENST00000454141 COL4A1P02462 1669 aa23.58■■□□□ 1.37
SEC22C-212ENST00000454141 ZNF316A6NFI3 1004 aaPredicted RBP23.58■■□□□ 1.37
SEC22C-212ENST00000454141 ANP32CO43423 234 aa23.58■■□□□ 1.37
SEC22C-212ENST00000454141 METTL22Q9BUU2 404 aaPredicted RBP23.58■■□□□ 1.37
SEC22C-212ENST00000454141 GPRC5DQ9NZD1 345 aa23.58■■□□□ 1.37
SEC22C-212ENST00000454141 PCCAP05165 728 aaPredicted RBP23.57■■□□□ 1.36
SEC22C-212ENST00000454141 CIAPIN1Q6FI81 312 aa23.57■■□□□ 1.36
SEC22C-212ENST00000454141 ADARB2Q9NS39 739 aaKnown RBP23.57■■□□□ 1.36
SEC22C-212ENST00000454141 CWC25Q9NXE8 425 aaPredicted RBP23.57■■□□□ 1.36
SEC22C-212ENST00000454141 NSFL1CQ9UNZ2 370 aaKnown RBP23.57■■□□□ 1.36
SEC22C-212ENST00000454141 IL16Q14005 1332 aa23.57■■□□□ 1.36
SEC22C-212ENST00000454141 GMPSP49915 693 aaPredicted RBP23.56■■□□□ 1.36
SEC22C-212ENST00000454141 NCBP3Q53F19 620 aaKnown RBP23.56■■□□□ 1.36
SEC22C-212ENST00000454141 STK31Q9BXU1 1019 aa23.56■■□□□ 1.36
SEC22C-212ENST00000454141 CDHR2Q9BYE9 1310 aa23.56■■□□□ 1.36
SEC22C-212ENST00000454141 RAD17O75943 681 aa23.55■■□□□ 1.36
SEC22C-212ENST00000454141 RPS8P62241 208 aaKnown RBP23.55■■□□□ 1.36
SEC22C-212ENST00000454141 TNIP1Q15025 636 aa23.55■■□□□ 1.36
SEC22C-212ENST00000454141 MAP3K2Q9Y2U5 619 aa23.55■■□□□ 1.36
SEC22C-212ENST00000454141 YDJCA8MPS7 323 aa23.54■■□□□ 1.36
SEC22C-212ENST00000454141 GPSM2P81274 684 aa23.54■■□□□ 1.36
SEC22C-212ENST00000454141 WASHC4Q2M389 1173 aa23.54■■□□□ 1.36
SEC22C-212ENST00000454141 TWISTNBQ3B726 338 aaPredicted RBP23.54■■□□□ 1.36
SEC22C-212ENST00000454141 COL13A1Q5TAT6 717 aaPredicted RBP23.54■■□□□ 1.36
SEC22C-212ENST00000454141 C6orf229H3BNL8 230 aa23.53■■□□□ 1.36
SEC22C-212ENST00000454141 PDE8AO60658 829 aa23.53■■□□□ 1.36
SEC22C-212ENST00000454141 CCDC152Q4G0S7 254 aa23.53■■□□□ 1.36
SEC22C-212ENST00000454141 KSR2Q6VAB6 950 aa23.53■■□□□ 1.36
SEC22C-212ENST00000454141 SEC31BQ9NQW1 1179 aa23.53■■□□□ 1.36
SEC22C-212ENST00000454141 PI4KAP2A4QPH2 592 aa23.52■■□□□ 1.36
SEC22C-212ENST00000454141 PI4KAP1Q8N8J0 262 aa23.52■■□□□ 1.36
SEC22C-212ENST00000454141 BCL2L13Q9BXK5 485 aa23.52■■□□□ 1.36
SEC22C-212ENST00000454141 POLLQ9UGP5 575 aa23.52■■□□□ 1.36
SEC22C-212ENST00000454141 JARID2Q92833 1246 aaPredicted RBP23.51■■□□□ 1.35
SEC22C-212ENST00000454141 EYA3Q99504 573 aa23.51■■□□□ 1.35
SEC22C-212ENST00000454141 RASSF10A6NK89 507 aa23.5■■□□□ 1.35
SEC22C-212ENST00000454141 RIMBP2O15034 1052 aa23.5■■□□□ 1.35
SEC22C-212ENST00000454141 IGKV5-2P06315 115 aa23.5■■□□□ 1.35
SEC22C-212ENST00000454141 VEGFBP49765 207 aa23.5■■□□□ 1.35
SEC22C-212ENST00000454141 NEXNQ0ZGT2 675 aa23.5■■□□□ 1.35
SEC22C-212ENST00000454141 DBNDD1Q9H9R9 158 aa23.5■■□□□ 1.35
SEC22C-212ENST00000454141 FANCIQ9NVI1 1328 aa23.5■■□□□ 1.35
SEC22C-212ENST00000454141 TBC1D16Q8TBP0 767 aa23.49■■□□□ 1.35
SEC22C-212ENST00000454141 PODXL2Q9NZ53 605 aa23.49■■□□□ 1.35
SEC22C-212ENST00000454141 ABT1Q9ULW3 272 aaKnown RBP23.49■■□□□ 1.35
SEC22C-212ENST00000454141 SLC4A2P04920 1241 aa23.48■■□□□ 1.35
SEC22C-212ENST00000454141 FMR1Q06787 632 aaKnown RBP eCLIP23.48■■□□□ 1.35
SEC22C-212ENST00000454141 G2E3Q7L622 706 aa23.48■■□□□ 1.35
SEC22C-212ENST00000454141 CCDC85AQ96PX6 553 aaPredicted RBP23.48■■□□□ 1.35
SEC22C-212ENST00000454141 TRAF5O00463 557 aa23.47■■□□□ 1.35
SEC22C-212ENST00000454141 PSMD14O00487 310 aa23.47■■□□□ 1.35
SEC22C-212ENST00000454141 ECE2O60344 883 aa23.47■■□□□ 1.35
SEC22C-212ENST00000454141 CTSWP56202 376 aa23.47■■□□□ 1.35
SEC22C-212ENST00000454141 DEFB115Q30KQ5 88 aa23.47■■□□□ 1.35
SEC22C-212ENST00000454141 GPR101Q96P66 508 aaPredicted RBP23.47■■□□□ 1.35
SEC22C-212ENST00000454141 ANKIB1Q9P2G1 1089 aa23.47■■□□□ 1.35
SEC22C-212ENST00000454141 SALL2Q9Y467 1007 aaPredicted RBP23.47■■□□□ 1.35
SEC22C-212ENST00000454141 UFL1O94874 794 aa23.46■■□□□ 1.35
SEC22C-212ENST00000454141 CWF19L2Q2TBE0 894 aaKnown RBP23.46■■□□□ 1.35
SEC22C-212ENST00000454141 WDR63Q8IWG1 891 aa23.46■■□□□ 1.35
SEC22C-212ENST00000454141 TRPM4Q8TD43 1214 aa23.46■■□□□ 1.35
SEC22C-212ENST00000454141 CNOT7Q9UIV1 285 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms