RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 OSBPP22059 807 aa7.48□□□□□ -1.21
MSH6-205ENST00000454137 RBM6P78332 1123 aaKnown RBP7.48□□□□□ -1.21
MSH6-205ENST00000454137 PDE4DQ08499 809 aa7.48□□□□□ -1.21
MSH6-205ENST00000454137 MAP2K5Q13163 448 aa7.48□□□□□ -1.21
MSH6-205ENST00000454137 HIC1Q14526 733 aa7.48□□□□□ -1.21
MSH6-205ENST00000454137 RC3H1Q5TC82 1133 aaKnown RBP7.48□□□□□ -1.21
MSH6-205ENST00000454137 TMEM92Q6UXU6 159 aa7.48□□□□□ -1.21
MSH6-205ENST00000454137 RIC3Q7Z5B4 369 aa7.48□□□□□ -1.21
MSH6-205ENST00000454137 SSH3Q8TE77 659 aa7.48□□□□□ -1.21
MSH6-205ENST00000454137 SLC4A9Q96Q91 983 aa7.48□□□□□ -1.21
MSH6-205ENST00000454137 COLQQ9Y215 455 aaPredicted RBP7.48□□□□□ -1.21
MSH6-205ENST00000454137 MYH14Q7Z406 1995 aaKnown RBP7.48□□□□□ -1.21
MSH6-205ENST00000454137 PALLDQ8WX93 1383 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 RGPD3A6NKT7 1758 aaPredicted RBP7.47□□□□□ -1.21
MSH6-205ENST00000454137 RGPD4Q7Z3J3 1758 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 LOC102724428A0A0B4J2F2 783 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 NEURL1BA8MQ27 555 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 GRM8O00222 908 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 GNPATO15228 680 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 GPR37O15354 613 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 EVI5O60447 810 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 A1BGP04217 495 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 IGKV5-2P06315 115 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 MYL6BP14649 208 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 SIK1P57059 783 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 GCKRQ14397 625 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 HSP90AB3PQ58FF7 597 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 DNAJC10Q8IXB1 793 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 SEPT12Q8IYM1 358 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 CCDC191Q8NCU4 936 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 PTCD2Q8WV60 388 aaKnown RBP7.47□□□□□ -1.21
MSH6-205ENST00000454137 CNTNAP4Q9C0A0 1308 aa7.47□□□□□ -1.21
MSH6-205ENST00000454137 BCORQ6W2J9 1755 aa7.46□□□□□ -1.21
MSH6-205ENST00000454137 A0A087WZG4 1122 aa7.46□□□□□ -1.22
MSH6-205ENST00000454137 RAB11FIP3O75154 756 aa7.46□□□□□ -1.22
MSH6-205ENST00000454137 SLC34A2O95436 690 aa7.46□□□□□ -1.22
MSH6-205ENST00000454137 EIF5P55010 431 aaKnown RBP7.46□□□□□ -1.22
MSH6-205ENST00000454137 HSP90AB4PQ58FF6 505 aa7.46□□□□□ -1.22
MSH6-205ENST00000454137 FAM196AQ6ZSG2 479 aa7.46□□□□□ -1.22
MSH6-205ENST00000454137 CHD1LQ86WJ1 897 aa7.46□□□□□ -1.22
MSH6-205ENST00000454137 SYTL4Q96C24 671 aaPredicted RBP7.46□□□□□ -1.22
MSH6-205ENST00000454137 ISCA1Q9BUE6 129 aa7.46□□□□□ -1.22
MSH6-205ENST00000454137 KDM4CQ9H3R0 1056 aa7.46□□□□□ -1.22
MSH6-205ENST00000454137 C9orf78Q9NZ63 289 aaPredicted RBP7.46□□□□□ -1.22
MSH6-205ENST00000454137 MAP3K15Q6ZN16 1313 aa7.46□□□□□ -1.22
MSH6-205ENST00000454137 MYH3P11055 1940 aa7.45□□□□□ -1.22
MSH6-205ENST00000454137 H7C1W4 665 aa7.45□□□□□ -1.22
MSH6-205ENST00000454137 NBPF7P0C2Y1 421 aaPredicted RBP7.45□□□□□ -1.22
MSH6-205ENST00000454137 ATP6V1AP38606 617 aa7.45□□□□□ -1.22
MSH6-205ENST00000454137 AIMP1Q12904 312 aaKnown RBP7.45□□□□□ -1.22
MSH6-205ENST00000454137 TCIRG1Q13488 830 aa7.45□□□□□ -1.22
MSH6-205ENST00000454137 BECN1Q14457 450 aa7.45□□□□□ -1.22
MSH6-205ENST00000454137 RABL6Q3YEC7 729 aaPredicted RBP7.45□□□□□ -1.22
MSH6-205ENST00000454137 INTS5Q6P9B9 1019 aaKnown RBP7.45□□□□□ -1.22
MSH6-205ENST00000454137 GIGYF2Q6Y7W6 1299 aaKnown RBP7.45□□□□□ -1.22
MSH6-205ENST00000454137 KIF6Q6ZMV9 814 aa7.45□□□□□ -1.22
MSH6-205ENST00000454137 DDX12PQ92771 950 aa7.45□□□□□ -1.22
MSH6-205ENST00000454137 CCDC87Q9NVE4 849 aa7.45□□□□□ -1.22
MSH6-205ENST00000454137 METRNQ9UJH8 293 aa7.45□□□□□ -1.22
MSH6-205ENST00000454137 LRRFIP2Q9Y608 721 aaKnown RBP7.45□□□□□ -1.22
MSH6-205ENST00000454137 IRF6O14896 467 aa7.44□□□□□ -1.22
MSH6-205ENST00000454137 KCNQ2O43526 872 aa7.44□□□□□ -1.22
MSH6-205ENST00000454137 EIF5BO60841 1220 aaKnown RBP7.44□□□□□ -1.22
MSH6-205ENST00000454137 CRKLP46109 303 aaKnown RBP7.44□□□□□ -1.22
MSH6-205ENST00000454137 CASP7P55210 303 aa7.44□□□□□ -1.22
MSH6-205ENST00000454137 NFKBIBQ15653 356 aa7.44□□□□□ -1.22
MSH6-205ENST00000454137 CWF19L2Q2TBE0 894 aaKnown RBP7.44□□□□□ -1.22
MSH6-205ENST00000454137 SLC27A3Q5K4L6 730 aa7.44□□□□□ -1.22
MSH6-205ENST00000454137 ANKRD45Q5TZF3 282 aa7.44□□□□□ -1.22
MSH6-205ENST00000454137 CLEC4GQ6UXB4 293 aa7.44□□□□□ -1.22
MSH6-205ENST00000454137 TTLL7Q6ZT98 887 aa7.44□□□□□ -1.22
MSH6-205ENST00000454137 KRT27Q7Z3Y8 459 aa7.44□□□□□ -1.22
MSH6-205ENST00000454137 ACSBG1Q96GR2 724 aa7.44□□□□□ -1.22
MSH6-205ENST00000454137 MYD88Q99836 296 aa7.44□□□□□ -1.22
MSH6-205ENST00000454137 PLA2G12BQ9BX93 195 aa7.44□□□□□ -1.22
MSH6-205ENST00000454137 LNPKQ9C0E8 428 aa7.44□□□□□ -1.22
MSH6-205ENST00000454137 OSBPL3Q9H4L5 887 aa7.44□□□□□ -1.22
MSH6-205ENST00000454137 UPF2Q9HAU5 1272 aaKnown RBP7.44□□□□□ -1.22
MSH6-205ENST00000454137 GPBP1L1Q9HC44 474 aaPredicted RBP7.44□□□□□ -1.22
MSH6-205ENST00000454137 ANO8Q9HCE9 1232 aaPredicted RBP7.44□□□□□ -1.22
MSH6-205ENST00000454137 CWC25Q9NXE8 425 aaPredicted RBP7.44□□□□□ -1.22
MSH6-205ENST00000454137 CDHR2Q9BYE9 1310 aa7.44□□□□□ -1.22
MSH6-205ENST00000454137 LAMB2P55268 1798 aa7.43□□□□□ -1.22
MSH6-205ENST00000454137 PCCAP05165 728 aaPredicted RBP7.43□□□□□ -1.22
MSH6-205ENST00000454137 HSP90B1P14625 803 aaKnown RBP7.43□□□□□ -1.22
MSH6-205ENST00000454137 ITPK1Q13572 414 aa7.43□□□□□ -1.22
MSH6-205ENST00000454137 PPP1R42Q7Z4L9 355 aa7.43□□□□□ -1.22
MSH6-205ENST00000454137 ERC1Q8IUD2 1116 aa7.43□□□□□ -1.22
MSH6-205ENST00000454137 EPAS1Q99814 870 aa7.43□□□□□ -1.22
MSH6-205ENST00000454137 ZBTB1Q9Y2K1 713 aa7.43□□□□□ -1.22
MSH6-205ENST00000454137 SCN7AQ01118 1682 aa7.43□□□□□ -1.22
MSH6-205ENST00000454137 TUBGCP6Q96RT7 1819 aa7.43□□□□□ -1.22
MSH6-205ENST00000454137 C4BP0C0L5 1744 aa7.42□□□□□ -1.22
MSH6-205ENST00000454137 A0A0G2JS52 829 aa7.42□□□□□ -1.22
MSH6-205ENST00000454137 PNMA6EA0A0J9YXQ4 647 aa7.42□□□□□ -1.22
MSH6-205ENST00000454137 SRGAP3O43295 1099 aa7.42□□□□□ -1.22
MSH6-205ENST00000454137 RPS6KA4O75676 772 aa7.42□□□□□ -1.22
MSH6-205ENST00000454137 RXRBP28702 533 aa7.42□□□□□ -1.22
MSH6-205ENST00000454137 AMHR2Q16671 573 aa7.42□□□□□ -1.22
MSH6-205ENST00000454137 PARP10Q53GL7 1025 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms