RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 STK31Q9BXU1 1019 aa21.17■□□□□ 0.98
NCKIPSD-208ENST00000454134 TAF1DQ9H5J8 278 aaPredicted RBP21.17■□□□□ 0.98
NCKIPSD-208ENST00000454134 MAP3K2Q9Y2U5 619 aa21.17■□□□□ 0.98
NCKIPSD-208ENST00000454134 FANCIQ9NVI1 1328 aa21.17■□□□□ 0.98
NCKIPSD-208ENST00000454134 EIF6P56537 245 aaKnown RBP21.16■□□□□ 0.98
NCKIPSD-208ENST00000454134 DPP8Q6V1X1 898 aaPredicted RBP21.16■□□□□ 0.98
NCKIPSD-208ENST00000454134 G2E3Q7L622 706 aa21.16■□□□□ 0.98
NCKIPSD-208ENST00000454134 MPNDQ8N594 471 aa21.16■□□□□ 0.98
NCKIPSD-208ENST00000454134 CELF1Q92879 486 aaKnown RBP21.16■□□□□ 0.98
NCKIPSD-208ENST00000454134 GJA3Q9Y6H8 435 aa21.16■□□□□ 0.98
NCKIPSD-208ENST00000454134 COL4A1P02462 1669 aa21.15■□□□□ 0.98
NCKIPSD-208ENST00000454134 PI4KAP2A4QPH2 592 aa21.15■□□□□ 0.98
NCKIPSD-208ENST00000454134 CHADLQ6NUI6 762 aa21.15■□□□□ 0.98
NCKIPSD-208ENST00000454134 WDR63Q8IWG1 891 aa21.15■□□□□ 0.98
NCKIPSD-208ENST00000454134 NIM1KQ8IY84 436 aa21.15■□□□□ 0.98
NCKIPSD-208ENST00000454134 GPC2Q8N158 579 aa21.15■□□□□ 0.98
NCKIPSD-208ENST00000454134 PI4KAP1Q8N8J0 262 aa21.15■□□□□ 0.98
NCKIPSD-208ENST00000454134 CCDC191Q8NCU4 936 aa21.15■□□□□ 0.98
NCKIPSD-208ENST00000454134 CWC25Q9NXE8 425 aaPredicted RBP21.15■□□□□ 0.98
NCKIPSD-208ENST00000454134 HACL1Q9UJ83 578 aa21.15■□□□□ 0.98
NCKIPSD-208ENST00000454134 SCN4AP35499 1836 aa21.15■□□□□ 0.98
NCKIPSD-208ENST00000454134 SLC4A2P04920 1241 aa21.14■□□□□ 0.97
NCKIPSD-208ENST00000454134 EAPPQ56P03 285 aaPredicted RBP21.14■□□□□ 0.97
NCKIPSD-208ENST00000454134 KSR2Q6VAB6 950 aa21.14■□□□□ 0.97
NCKIPSD-208ENST00000454134 RTFDC1Q9BY42 306 aaPredicted RBP21.14■□□□□ 0.97
NCKIPSD-208ENST00000454134 EPHX2P34913 555 aa21.13■□□□□ 0.97
NCKIPSD-208ENST00000454134 SUPT20HQ8NEM7 779 aa21.13■□□□□ 0.97
NCKIPSD-208ENST00000454134 SPINK5Q9NQ38 1064 aaPredicted RBP21.13■□□□□ 0.97
NCKIPSD-208ENST00000454134 PCCAP05165 728 aaPredicted RBP21.12■□□□□ 0.97
NCKIPSD-208ENST00000454134 EXOSC9Q06265 439 aaKnown RBP21.12■□□□□ 0.97
NCKIPSD-208ENST00000454134 IGKV5-2P06315 115 aa21.11■□□□□ 0.97
NCKIPSD-208ENST00000454134 TMC4Q7Z404 712 aa21.11■□□□□ 0.97
NCKIPSD-208ENST00000454134 LDHDQ86WU2 507 aa21.11■□□□□ 0.97
NCKIPSD-208ENST00000454134 CCDC85AQ96PX6 553 aaPredicted RBP21.11■□□□□ 0.97
NCKIPSD-208ENST00000454134 DUOX1Q9NRD9 1551 aa21.1■□□□□ 0.97
NCKIPSD-208ENST00000454134 LRRC37AA6NMS7 1700 aa21.1■□□□□ 0.97
NCKIPSD-208ENST00000454134 VAMP4O75379 141 aa21.1■□□□□ 0.97
NCKIPSD-208ENST00000454134 VPS33BQ9H267 617 aa21.1■□□□□ 0.97
NCKIPSD-208ENST00000454134 SEC31BQ9NQW1 1179 aa21.1■□□□□ 0.97
NCKIPSD-208ENST00000454134 CLEC11AQ9Y240 323 aa21.1■□□□□ 0.97
NCKIPSD-208ENST00000454134 PDE8AO60658 829 aa21.09■□□□□ 0.97
NCKIPSD-208ENST00000454134 RPS8P62241 208 aaKnown RBP21.09■□□□□ 0.97
NCKIPSD-208ENST00000454134 KIAA2012Q0VF49 1180 aa21.09■□□□□ 0.97
NCKIPSD-208ENST00000454134 CWF19L2Q2TBE0 894 aaKnown RBP21.09■□□□□ 0.97
NCKIPSD-208ENST00000454134 KLRG1Q96E93 195 aa21.09■□□□□ 0.97
NCKIPSD-208ENST00000454134 ZNRF3Q9ULT6 936 aa21.09■□□□□ 0.97
NCKIPSD-208ENST00000454134 NSFL1CQ9UNZ2 370 aaKnown RBP21.09■□□□□ 0.97
NCKIPSD-208ENST00000454134 LTBP1Q14766 1721 aa21.09■□□□□ 0.97
NCKIPSD-208ENST00000454134 HSP90B1P14625 803 aaKnown RBP21.08■□□□□ 0.97
NCKIPSD-208ENST00000454134 SCNN1DP51172 638 aa21.08■□□□□ 0.97
NCKIPSD-208ENST00000454134 GPSM2P81274 684 aa21.08■□□□□ 0.97
NCKIPSD-208ENST00000454134 CXCL9Q07325 125 aa21.08■□□□□ 0.97
NCKIPSD-208ENST00000454134 NEXNQ0ZGT2 675 aa21.08■□□□□ 0.97
NCKIPSD-208ENST00000454134 FLIIQ13045 1269 aa21.08■□□□□ 0.97
NCKIPSD-208ENST00000454134 NEURL1BA8MQ27 555 aa21.07■□□□□ 0.96
NCKIPSD-208ENST00000454134 LMOD1P29536 600 aaPredicted RBP21.07■□□□□ 0.96
NCKIPSD-208ENST00000454134 EPS15P42566 896 aa21.07■□□□□ 0.96
NCKIPSD-208ENST00000454134 CCDC152Q4G0S7 254 aa21.07■□□□□ 0.96
NCKIPSD-208ENST00000454134 C6orf229H3BNL8 230 aa21.06■□□□□ 0.96
NCKIPSD-208ENST00000454134 FKBP5Q13451 457 aaPredicted RBP21.06■□□□□ 0.96
NCKIPSD-208ENST00000454134 PNMA8AQ86V59 439 aaPredicted RBP21.06■□□□□ 0.96
NCKIPSD-208ENST00000454134 CDHR2Q9BYE9 1310 aa21.05■□□□□ 0.96
NCKIPSD-208ENST00000454134 ADAMTSL1Q8N6G6 1762 aa21.05■□□□□ 0.96
NCKIPSD-208ENST00000454134 RIMBP2O15034 1052 aa21.05■□□□□ 0.96
NCKIPSD-208ENST00000454134 RAD17O75943 681 aa21.05■□□□□ 0.96
NCKIPSD-208ENST00000454134 MAP1SQ66K74 1059 aaPredicted RBP21.05■□□□□ 0.96
NCKIPSD-208ENST00000454134 GPR101Q96P66 508 aaPredicted RBP21.05■□□□□ 0.96
NCKIPSD-208ENST00000454134 MYH16Q9H6N6 1097 aa21.05■□□□□ 0.96
NCKIPSD-208ENST00000454134 POLLQ9UGP5 575 aa21.05■□□□□ 0.96
NCKIPSD-208ENST00000454134 YDJCA8MPS7 323 aa21.04■□□□□ 0.96
NCKIPSD-208ENST00000454134 CTSWP56202 376 aa21.04■□□□□ 0.96
NCKIPSD-208ENST00000454134 WASHC4Q2M389 1173 aa21.04■□□□□ 0.96
NCKIPSD-208ENST00000454134 PASKQ96RG2 1323 aa21.04■□□□□ 0.96
NCKIPSD-208ENST00000454134 ITGBL1O95965 494 aaPredicted RBP21.03■□□□□ 0.96
NCKIPSD-208ENST00000454134 GMPSP49915 693 aaPredicted RBP21.03■□□□□ 0.96
NCKIPSD-208ENST00000454134 CIAPIN1Q6FI81 312 aa21.03■□□□□ 0.96
NCKIPSD-208ENST00000454134 UBE3BQ7Z3V4 1068 aa21.03■□□□□ 0.96
NCKIPSD-208ENST00000454134 DNAAF4Q8WXU2 420 aa21.03■□□□□ 0.96
NCKIPSD-208ENST00000454134 CNTROBQ8N137 903 aa21.02■□□□□ 0.96
NCKIPSD-208ENST00000454134 TBC1D16Q8TBP0 767 aa21.02■□□□□ 0.96
NCKIPSD-208ENST00000454134 DBNDD1Q9H9R9 158 aa21.02■□□□□ 0.96
NCKIPSD-208ENST00000454134 GPRC5DQ9NZD1 345 aa21.02■□□□□ 0.96
NCKIPSD-208ENST00000454134 H7C1W4 665 aa21.01■□□□□ 0.95
NCKIPSD-208ENST00000454134 GCKRQ14397 625 aa21.01■□□□□ 0.95
NCKIPSD-208ENST00000454134 DOK7Q18PE1 504 aa21.01■□□□□ 0.95
NCKIPSD-208ENST00000454134 ANKRD18AQ8IVF6 992 aa21.01■□□□□ 0.95
NCKIPSD-208ENST00000454134 JMYQ8N9B5 988 aa21.01■□□□□ 0.95
NCKIPSD-208ENST00000454134 TTLL11Q8NHH1 800 aa21.01■□□□□ 0.95
NCKIPSD-208ENST00000454134 CREBZFQ9NS37 354 aa21.01■□□□□ 0.95
NCKIPSD-208ENST00000454134 CACNA1FO60840 1977 aa21.01■□□□□ 0.95
NCKIPSD-208ENST00000454134 ZNF521Q96K83 1311 aa21.01■□□□□ 0.95
NCKIPSD-208ENST00000454134 F6X3S4 739 aa21■□□□□ 0.95
NCKIPSD-208ENST00000454134 TNIP1Q15025 636 aa21■□□□□ 0.95
NCKIPSD-208ENST00000454134 GREM2Q9H772 168 aa21■□□□□ 0.95
NCKIPSD-208ENST00000454134 ANKIB1Q9P2G1 1089 aa21■□□□□ 0.95
NCKIPSD-208ENST00000454134 UFL1O94874 794 aa20.99■□□□□ 0.95
NCKIPSD-208ENST00000454134 USP50Q70EL3 339 aaPredicted RBP20.99■□□□□ 0.95
NCKIPSD-208ENST00000454134 LINS1Q8NG48 757 aa20.99■□□□□ 0.95
NCKIPSD-208ENST00000454134 EYA3Q99504 573 aa20.99■□□□□ 0.95
NCKIPSD-208ENST00000454134 BCL2L13Q9BXK5 485 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms