RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 SCN4AP35499 1836 aa18.67■□□□□ 0.58
HSPG2-207ENST00000453796 LTBP1Q14766 1721 aa18.67■□□□□ 0.58
HSPG2-207ENST00000453796 SP8Q8IXZ3 490 aa18.67■□□□□ 0.58
HSPG2-207ENST00000453796 DUOX1Q9NRD9 1551 aa18.67■□□□□ 0.58
HSPG2-207ENST00000453796 FZD9O00144 591 aa18.66■□□□□ 0.58
HSPG2-207ENST00000453796 RBM46Q8TBY0 533 aaKnown RBP18.66■□□□□ 0.58
HSPG2-207ENST00000453796 CDHR2Q9BYE9 1310 aa18.66■□□□□ 0.58
HSPG2-207ENST00000453796 NEURL1BA8MQ27 555 aa18.65■□□□□ 0.58
HSPG2-207ENST00000453796 DDNO94850 711 aaPredicted RBP18.65■□□□□ 0.58
HSPG2-207ENST00000453796 VEGFAP15692 232 aaPredicted RBP18.65■□□□□ 0.58
HSPG2-207ENST00000453796 CWF19L2Q2TBE0 894 aaKnown RBP18.65■□□□□ 0.58
HSPG2-207ENST00000453796 JARID2Q92833 1246 aaPredicted RBP18.65■□□□□ 0.58
HSPG2-207ENST00000453796 CELF1Q92879 486 aaKnown RBP18.65■□□□□ 0.58
HSPG2-207ENST00000453796 RTFDC1Q9BY42 306 aaPredicted RBP18.65■□□□□ 0.58
HSPG2-207ENST00000453796 ZNF541Q9H0D2 1346 aa18.65■□□□□ 0.58
HSPG2-207ENST00000453796 PDE8AO60658 829 aa18.64■□□□□ 0.57
HSPG2-207ENST00000453796 NEXNQ0ZGT2 675 aa18.64■□□□□ 0.57
HSPG2-207ENST00000453796 FKBP5Q13451 457 aaPredicted RBP18.64■□□□□ 0.57
HSPG2-207ENST00000453796 TMC4Q7Z404 712 aa18.64■□□□□ 0.57
HSPG2-207ENST00000453796 DNAAF4Q8WXU2 420 aa18.64■□□□□ 0.57
HSPG2-207ENST00000453796 E9PSI1 815 aa18.63■□□□□ 0.57
HSPG2-207ENST00000453796 HSP90B1P14625 803 aaKnown RBP18.63■□□□□ 0.57
HSPG2-207ENST00000453796 HSPA6P17066 643 aa18.63■□□□□ 0.57
HSPG2-207ENST00000453796 SLFN5Q08AF3 891 aa18.63■□□□□ 0.57
HSPG2-207ENST00000453796 C16orf71Q8IYS4 520 aaPredicted RBP18.63■□□□□ 0.57
HSPG2-207ENST00000453796 L3MBTL3Q96JM7 780 aaPredicted RBP18.63■□□□□ 0.57
HSPG2-207ENST00000453796 VPS33BQ9H267 617 aa18.63■□□□□ 0.57
HSPG2-207ENST00000453796 H7C1W4 665 aa18.62■□□□□ 0.57
HSPG2-207ENST00000453796 SPEF2Q9C093 1822 aa18.62■□□□□ 0.57
HSPG2-207ENST00000453796 CEP350Q5VT06 3117 aa18.61■□□□□ 0.57
HSPG2-207ENST00000453796 GCKRQ14397 625 aa18.61■□□□□ 0.57
HSPG2-207ENST00000453796 TRMT2AQ8IZ69 625 aaKnown RBP18.61■□□□□ 0.57
HSPG2-207ENST00000453796 MPNDQ8N594 471 aa18.61■□□□□ 0.57
HSPG2-207ENST00000453796 LINS1Q8NG48 757 aa18.61■□□□□ 0.57
HSPG2-207ENST00000453796 TMX4Q9H1E5 349 aaPredicted RBP18.61■□□□□ 0.57
HSPG2-207ENST00000453796 SEC31BQ9NQW1 1179 aa18.61■□□□□ 0.57
HSPG2-207ENST00000453796 CASP7P55210 303 aa18.6■□□□□ 0.57
HSPG2-207ENST00000453796 RPS8P62241 208 aaKnown RBP18.6■□□□□ 0.57
HSPG2-207ENST00000453796 FSTL1Q12841 308 aa18.6■□□□□ 0.57
HSPG2-207ENST00000453796 AOC3Q16853 763 aa18.6■□□□□ 0.57
HSPG2-207ENST00000453796 CCDC152Q4G0S7 254 aa18.6■□□□□ 0.57
HSPG2-207ENST00000453796 DPP8Q6V1X1 898 aaPredicted RBP18.6■□□□□ 0.57
HSPG2-207ENST00000453796 LARGE2Q8N3Y3 721 aa18.6■□□□□ 0.57
HSPG2-207ENST00000453796 SUPT20HQ8NEM7 779 aa18.6■□□□□ 0.57
HSPG2-207ENST00000453796 JDP2Q8WYK2 163 aa18.6■□□□□ 0.57
HSPG2-207ENST00000453796 CDCA7LQ96GN5 454 aa18.6■□□□□ 0.57
HSPG2-207ENST00000453796 F6X3S4 739 aa18.59■□□□□ 0.57
HSPG2-207ENST00000453796 PPIP5K2O43314 1243 aa18.59■□□□□ 0.57
HSPG2-207ENST00000453796 CTSWP56202 376 aa18.59■□□□□ 0.57
HSPG2-207ENST00000453796 DIEXFQ68CQ4 756 aaKnown RBP18.59■□□□□ 0.57
HSPG2-207ENST00000453796 TTLL11Q8NHH1 800 aa18.59■□□□□ 0.57
HSPG2-207ENST00000453796 ADAMTSL1Q8N6G6 1762 aa18.59■□□□□ 0.57
HSPG2-207ENST00000453796 KIAA2012Q0VF49 1180 aa18.58■□□□□ 0.56
HSPG2-207ENST00000453796 BEND3Q5T5X7 828 aa18.58■□□□□ 0.56
HSPG2-207ENST00000453796 UBE3BQ7Z3V4 1068 aa18.58■□□□□ 0.56
HSPG2-207ENST00000453796 GPC2Q8N158 579 aa18.58■□□□□ 0.56
HSPG2-207ENST00000453796 PLA2G12BQ9BX93 195 aa18.58■□□□□ 0.56
HSPG2-207ENST00000453796 RTL9Q8NET4 1388 aa18.57■□□□□ 0.56
HSPG2-207ENST00000453796 MIER1Q8N108 512 aa18.57■□□□□ 0.56
HSPG2-207ENST00000453796 SMC1BQ8NDV3 1235 aa18.57■□□□□ 0.56
HSPG2-207ENST00000453796 IQCA1LA6NCM1 817 aa18.56■□□□□ 0.56
HSPG2-207ENST00000453796 EIF6P56537 245 aaKnown RBP18.56■□□□□ 0.56
HSPG2-207ENST00000453796 GPSM2P81274 684 aa18.56■□□□□ 0.56
HSPG2-207ENST00000453796 NIM1KQ8IY84 436 aa18.56■□□□□ 0.56
HSPG2-207ENST00000453796 MRPL50Q8N5N7 158 aaKnown RBP18.56■□□□□ 0.56
HSPG2-207ENST00000453796 CCDC85AQ96PX6 553 aaPredicted RBP18.56■□□□□ 0.56
HSPG2-207ENST00000453796 POTEIP0CG38 1075 aa18.55■□□□□ 0.56
HSPG2-207ENST00000453796 POTEJP0CG39 1038 aa18.55■□□□□ 0.56
HSPG2-207ENST00000453796 TAF1DQ9H5J8 278 aaPredicted RBP18.55■□□□□ 0.56
HSPG2-207ENST00000453796 GREM2Q9H772 168 aa18.55■□□□□ 0.56
HSPG2-207ENST00000453796 PODXL2Q9NZ53 605 aa18.55■□□□□ 0.56
HSPG2-207ENST00000453796 POLLQ9UGP5 575 aa18.55■□□□□ 0.56
HSPG2-207ENST00000453796 NSFL1CQ9UNZ2 370 aaKnown RBP18.55■□□□□ 0.56
HSPG2-207ENST00000453796 SCN9AQ15858 1988 aa18.53■□□□□ 0.56
HSPG2-207ENST00000453796 CSF1RP07333 972 aa18.53■□□□□ 0.56
HSPG2-207ENST00000453796 ANKRD18AQ8IVF6 992 aa18.53■□□□□ 0.56
HSPG2-207ENST00000453796 SSH1Q8WYL5 1049 aa18.53■□□□□ 0.56
HSPG2-207ENST00000453796 HACL1Q9UJ83 578 aa18.53■□□□□ 0.56
HSPG2-207ENST00000453796 ZNRF3Q9ULT6 936 aa18.53■□□□□ 0.56
HSPG2-207ENST00000453796 PSME4Q14997 1843 aa18.53■□□□□ 0.56
HSPG2-207ENST00000453796 A0A1B0GUL6 1792 aa18.53■□□□□ 0.56
HSPG2-207ENST00000453796 YDJCA8MPS7 323 aa18.52■□□□□ 0.56
HSPG2-207ENST00000453796 SCNN1DP51172 638 aa18.52■□□□□ 0.56
HSPG2-207ENST00000453796 APLP1P51693 650 aa18.52■□□□□ 0.56
HSPG2-207ENST00000453796 CXCL9Q07325 125 aa18.52■□□□□ 0.56
HSPG2-207ENST00000453796 TBC1D16Q8TBP0 767 aa18.52■□□□□ 0.56
HSPG2-207ENST00000453796 CDC5LQ99459 802 aaKnown RBP18.52■□□□□ 0.56
HSPG2-207ENST00000453796 GJA3Q9Y6H8 435 aa18.52■□□□□ 0.56
HSPG2-207ENST00000453796 ALDH1L1O75891 902 aa18.51■□□□□ 0.55
HSPG2-207ENST00000453796 WASHC4Q2M389 1173 aa18.51■□□□□ 0.55
HSPG2-207ENST00000453796 ALDH1L2Q3SY69 923 aa18.51■□□□□ 0.55
HSPG2-207ENST00000453796 PTPRCP08575 1304 aa18.5■□□□□ 0.55
HSPG2-207ENST00000453796 C6orf229H3BNL8 230 aa18.5■□□□□ 0.55
HSPG2-207ENST00000453796 EPHX2P34913 555 aa18.5■□□□□ 0.55
HSPG2-207ENST00000453796 FOXO4P98177 505 aa18.5■□□□□ 0.55
HSPG2-207ENST00000453796 CHADLQ6NUI6 762 aa18.5■□□□□ 0.55
HSPG2-207ENST00000453796 BSDC1Q9NW68 430 aaPredicted RBP18.5■□□□□ 0.55
HSPG2-207ENST00000453796 GRM8O00222 908 aa18.49■□□□□ 0.55
HSPG2-207ENST00000453796 CT47B1P0C2W7 299 aaPredicted RBP18.49■□□□□ 0.55
HSPG2-207ENST00000453796 ITGA6P23229 1130 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms