RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 CAMTA2O94983 1202 aa10.36□□□□□ -0.75
LMO3-210ENST00000453727 AK7Q96M32 723 aa10.36□□□□□ -0.75
LMO3-210ENST00000453727 RAB11FIP3O75154 756 aa10.36□□□□□ -0.75
LMO3-210ENST00000453727 RABL6Q3YEC7 729 aaPredicted RBP10.36□□□□□ -0.75
LMO3-210ENST00000453727 AMIGO3Q86WK7 504 aa10.36□□□□□ -0.75
LMO3-210ENST00000453727 UPF2Q9HAU5 1272 aaKnown RBP10.36□□□□□ -0.75
LMO3-210ENST00000453727 FOXO4P98177 505 aa10.35□□□□□ -0.75
LMO3-210ENST00000453727 BMP2KLQ5H9B9 411 aa10.35□□□□□ -0.75
LMO3-210ENST00000453727 RHPN1Q8TCX5 695 aa10.35□□□□□ -0.75
LMO3-210ENST00000453727 GTPBP4Q9BZE4 634 aaKnown RBP10.35□□□□□ -0.75
LMO3-210ENST00000453727 IL1RAPL2Q9NP60 686 aa10.35□□□□□ -0.75
LMO3-210ENST00000453727 UQCRHLA0A096LP55 91 aa10.35□□□□□ -0.75
LMO3-210ENST00000453727 DDX11L8A8MPP1 907 aa10.35□□□□□ -0.75
LMO3-210ENST00000453727 DYNC1I1O14576 645 aa10.35□□□□□ -0.75
LMO3-210ENST00000453727 PHF14O94880 888 aa10.35□□□□□ -0.75
LMO3-210ENST00000453727 UQCRHP07919 91 aa10.35□□□□□ -0.75
LMO3-210ENST00000453727 CCDC173Q0VFZ6 552 aa10.35□□□□□ -0.75
LMO3-210ENST00000453727 HSP90AB4PQ58FF6 505 aa10.35□□□□□ -0.75
LMO3-210ENST00000453727 NLRP10Q86W26 655 aa10.35□□□□□ -0.75
LMO3-210ENST00000453727 KLHDC4Q8TBB5 520 aa10.35□□□□□ -0.75
LMO3-210ENST00000453727 SALL3Q9BXA9 1300 aa10.35□□□□□ -0.75
LMO3-210ENST00000453727 SEC24BO95487 1268 aa10.34□□□□□ -0.75
LMO3-210ENST00000453727 GSPT1P15170 499 aaKnown RBP10.34□□□□□ -0.75
LMO3-210ENST00000453727 LMBR1LQ6UX01 489 aa10.34□□□□□ -0.75
LMO3-210ENST00000453727 ZNF34Q8IZ26 560 aa10.34□□□□□ -0.75
LMO3-210ENST00000453727 KIF1BPQ96EK5 621 aa10.34□□□□□ -0.75
LMO3-210ENST00000453727 FAM89AQ96GI7 184 aa10.34□□□□□ -0.75
LMO3-210ENST00000453727 CCDC94Q9BW85 323 aaPredicted RBP10.34□□□□□ -0.75
LMO3-210ENST00000453727 TMEM51Q9NW97 253 aa10.34□□□□□ -0.75
LMO3-210ENST00000453727 ZNF652Q9Y2D9 606 aa10.34□□□□□ -0.75
LMO3-210ENST00000453727 TNS1Q9HBL0 1735 aaKnown RBP10.34□□□□□ -0.75
LMO3-210ENST00000453727 BCORQ6W2J9 1755 aa10.34□□□□□ -0.75
LMO3-210ENST00000453727 LETM1O95202 739 aaPredicted RBP10.34□□□□□ -0.75
LMO3-210ENST00000453727 PCCAP05165 728 aaPredicted RBP10.34□□□□□ -0.75
LMO3-210ENST00000453727 ZSCAN20P17040 1043 aaPredicted RBP10.34□□□□□ -0.75
LMO3-210ENST00000453727 CDK11BP21127 795 aaKnown RBP10.34□□□□□ -0.75
LMO3-210ENST00000453727 RFX5P48382 616 aaPredicted RBP10.34□□□□□ -0.75
LMO3-210ENST00000453727 OS9Q13438 667 aaPredicted RBP10.34□□□□□ -0.75
LMO3-210ENST00000453727 TRAPPC3LQ5T215 181 aa10.34□□□□□ -0.75
LMO3-210ENST00000453727 TTC22Q5TAA0 569 aa10.34□□□□□ -0.75
LMO3-210ENST00000453727 CLEC4GQ6UXB4 293 aa10.34□□□□□ -0.75
LMO3-210ENST00000453727 ZBTB38Q8NAP3 1195 aaPredicted RBP10.34□□□□□ -0.75
LMO3-210ENST00000453727 ARHGEF1Q92888 912 aaKnown RBP10.34□□□□□ -0.75
LMO3-210ENST00000453727 NARFQ9UHQ1 456 aa10.34□□□□□ -0.75
LMO3-210ENST00000453727 UBN2Q6ZU65 1347 aa10.34□□□□□ -0.75
LMO3-210ENST00000453727 ZPR1O75312 459 aa10.33□□□□□ -0.76
LMO3-210ENST00000453727 HMGB2P26583 209 aaKnown RBP10.33□□□□□ -0.76
LMO3-210ENST00000453727 PDE1AP54750 535 aa10.33□□□□□ -0.76
LMO3-210ENST00000453727 TAF3Q5VWG9 929 aa10.33□□□□□ -0.76
LMO3-210ENST00000453727 USPL1Q5W0Q7 1092 aa10.33□□□□□ -0.76
LMO3-210ENST00000453727 SIL1Q9H173 461 aa10.33□□□□□ -0.76
LMO3-210ENST00000453727 NIP7Q9Y221 180 aaKnown RBP eCLIP10.33□□□□□ -0.76
LMO3-210ENST00000453727 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.33□□□□□ -0.76
LMO3-210ENST00000453727 MX1P20591 662 aa10.33□□□□□ -0.76
LMO3-210ENST00000453727 RFC4P35249 363 aa10.33□□□□□ -0.76
LMO3-210ENST00000453727 PTPN12Q05209 780 aaKnown RBP10.33□□□□□ -0.76
LMO3-210ENST00000453727 TSHZ3Q63HK5 1081 aa10.33□□□□□ -0.76
LMO3-210ENST00000453727 SYNE4Q8N205 404 aa10.33□□□□□ -0.76
LMO3-210ENST00000453727 OSBPL3Q9H4L5 887 aa10.33□□□□□ -0.76
LMO3-210ENST00000453727 SRP68Q9UHB9 627 aaKnown RBP10.33□□□□□ -0.76
LMO3-210ENST00000453727 TRMT112Q9UI30 125 aaKnown RBP10.33□□□□□ -0.76
LMO3-210ENST00000453727 SASH1O94885 1247 aa10.32□□□□□ -0.76
LMO3-210ENST00000453727 G3BP1Q13283 466 aaKnown RBP eCLIP10.32□□□□□ -0.76
LMO3-210ENST00000453727 NUTM1Q86Y26 1132 aa10.32□□□□□ -0.76
LMO3-210ENST00000453727 COPRSQ9NQ92 184 aa10.32□□□□□ -0.76
LMO3-210ENST00000453727 CHMP5Q9NZZ3 219 aa10.32□□□□□ -0.76
LMO3-210ENST00000453727 CHMP3Q9Y3E7 222 aa10.32□□□□□ -0.76
LMO3-210ENST00000453727 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.32□□□□□ -0.76
LMO3-210ENST00000453727 TUBGCP6Q96RT7 1819 aa10.32□□□□□ -0.76
LMO3-210ENST00000453727 FAM177BA6PVY3 158 aa10.32□□□□□ -0.76
LMO3-210ENST00000453727 ADRA2BP18089 450 aa10.32□□□□□ -0.76
LMO3-210ENST00000453727 ERC1Q8IUD2 1116 aa10.32□□□□□ -0.76
LMO3-210ENST00000453727 PLCD3Q8N3E9 789 aa10.32□□□□□ -0.76
LMO3-210ENST00000453727 BCL2L12Q9HB09 334 aa10.32□□□□□ -0.76
LMO3-210ENST00000453727 UBR3Q6ZT12 1888 aa10.31□□□□□ -0.76
LMO3-210ENST00000453727 CDHR2Q9BYE9 1310 aa10.31□□□□□ -0.76
LMO3-210ENST00000453727 USP42Q9H9J4 1324 aaKnown RBP10.31□□□□□ -0.76
LMO3-210ENST00000453727 EN1Q05925 392 aaPredicted RBP10.31□□□□□ -0.76
LMO3-210ENST00000453727 PARP10Q53GL7 1025 aa10.31□□□□□ -0.76
LMO3-210ENST00000453727 SUSD4Q5VX71 490 aa10.31□□□□□ -0.76
LMO3-210ENST00000453727 PLA2G12BQ9BX93 195 aa10.31□□□□□ -0.76
LMO3-210ENST00000453727 MYH3P11055 1940 aa10.31□□□□□ -0.76
LMO3-210ENST00000453727 SCN7AQ01118 1682 aa10.31□□□□□ -0.76
LMO3-210ENST00000453727 RGL2O15211 777 aa10.31□□□□□ -0.76
LMO3-210ENST00000453727 SSFA2P28290 1259 aa10.31□□□□□ -0.76
LMO3-210ENST00000453727 SF3B2Q13435 895 aaKnown RBP10.31□□□□□ -0.76
LMO3-210ENST00000453727 BICDL1Q6ZP65 573 aa10.31□□□□□ -0.76
LMO3-210ENST00000453727 SPRYD3Q8NCJ5 442 aa10.31□□□□□ -0.76
LMO3-210ENST00000453727 TFCP2L1Q9NZI6 479 aa10.31□□□□□ -0.76
LMO3-210ENST00000453727 STAP2Q9UGK3 403 aa10.31□□□□□ -0.76
LMO3-210ENST00000453727 C4AP0C0L4 1744 aa10.3□□□□□ -0.76
LMO3-210ENST00000453727 VGLL3A8MV65 326 aa10.3□□□□□ -0.76
LMO3-210ENST00000453727 EZH2Q15910 746 aaKnown RBP10.3□□□□□ -0.76
LMO3-210ENST00000453727 ZNF827Q17R98 1081 aa10.3□□□□□ -0.76
LMO3-210ENST00000453727 TBC1D9BQ66K14 1250 aa10.3□□□□□ -0.76
LMO3-210ENST00000453727 CLASRPQ8N2M8 674 aaKnown RBP10.3□□□□□ -0.76
LMO3-210ENST00000453727 TBC1D2Q9BYX2 928 aa10.3□□□□□ -0.76
LMO3-210ENST00000453727 SH3TC1Q8TE82 1336 aa10.3□□□□□ -0.76
LMO3-210ENST00000453727 IRS4O14654 1257 aaPredicted RBP10.29□□□□□ -0.76
LMO3-210ENST00000453727 SDSP20132 328 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms