RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 FAM177BA6PVY3 158 aa7.41□□□□□ -1.22
SDC4P-201ENST00000453285 PHF14O94880 888 aa7.41□□□□□ -1.22
SDC4P-201ENST00000453285 GYS1P13807 737 aa7.41□□□□□ -1.22
SDC4P-201ENST00000453285 HCLS1P14317 486 aaPredicted RBP7.41□□□□□ -1.22
SDC4P-201ENST00000453285 GSPT1P15170 499 aaKnown RBP7.41□□□□□ -1.22
SDC4P-201ENST00000453285 HMGB2P26583 209 aaKnown RBP7.41□□□□□ -1.22
SDC4P-201ENST00000453285 RFC4P35249 363 aa7.41□□□□□ -1.22
SDC4P-201ENST00000453285 PDE1AP54750 535 aa7.41□□□□□ -1.22
SDC4P-201ENST00000453285 CTSWP56202 376 aa7.41□□□□□ -1.22
SDC4P-201ENST00000453285 G3BP1Q13283 466 aaKnown RBP eCLIP7.41□□□□□ -1.22
SDC4P-201ENST00000453285 BMP2KLQ5H9B9 411 aa7.41□□□□□ -1.22
SDC4P-201ENST00000453285 SLC10A5Q5PT55 438 aa7.41□□□□□ -1.22
SDC4P-201ENST00000453285 TTC22Q5TAA0 569 aa7.41□□□□□ -1.22
SDC4P-201ENST00000453285 ERC1Q8IUD2 1116 aa7.41□□□□□ -1.22
SDC4P-201ENST00000453285 ZNF594Q96JF6 807 aaPredicted RBP7.41□□□□□ -1.22
SDC4P-201ENST00000453285 SIL1Q9H173 461 aa7.41□□□□□ -1.22
SDC4P-201ENST00000453285 ZBTB47Q9UFB7 747 aaPredicted RBP7.41□□□□□ -1.22
SDC4P-201ENST00000453285 LRP5O75197 1615 aa7.41□□□□□ -1.22
SDC4P-201ENST00000453285 ARAP2Q8WZ64 1704 aa7.41□□□□□ -1.22
SDC4P-201ENST00000453285 MYH7P12883 1935 aa7.4□□□□□ -1.22
SDC4P-201ENST00000453285 EYA2O00167 538 aa7.4□□□□□ -1.22
SDC4P-201ENST00000453285 CIAO1O76071 339 aa7.4□□□□□ -1.22
SDC4P-201ENST00000453285 TM4SF1P30408 202 aa7.4□□□□□ -1.22
SDC4P-201ENST00000453285 EN1Q05925 392 aaPredicted RBP7.4□□□□□ -1.22
SDC4P-201ENST00000453285 OS9Q13438 667 aaPredicted RBP7.4□□□□□ -1.22
SDC4P-201ENST00000453285 NFIXQ14938 502 aa7.4□□□□□ -1.22
SDC4P-201ENST00000453285 EZH2Q15910 746 aaKnown RBP7.4□□□□□ -1.22
SDC4P-201ENST00000453285 ERFEQ4G0M1 354 aa7.4□□□□□ -1.22
SDC4P-201ENST00000453285 LRRC24Q50LG9 513 aa7.4□□□□□ -1.22
SDC4P-201ENST00000453285 BICDL1Q6ZP65 573 aa7.4□□□□□ -1.22
SDC4P-201ENST00000453285 COL23A1Q86Y22 540 aaPredicted RBP7.4□□□□□ -1.22
SDC4P-201ENST00000453285 NUTM1Q86Y26 1132 aa7.4□□□□□ -1.22
SDC4P-201ENST00000453285 EAF2Q96CJ1 260 aaPredicted RBP7.4□□□□□ -1.22
SDC4P-201ENST00000453285 CCDC85AQ96PX6 553 aaPredicted RBP7.4□□□□□ -1.22
SDC4P-201ENST00000453285 SETDB2Q96T68 719 aa7.4□□□□□ -1.22
SDC4P-201ENST00000453285 PUS3Q9BZE2 481 aaKnown RBP7.4□□□□□ -1.22
SDC4P-201ENST00000453285 GREM2Q9H772 168 aa7.4□□□□□ -1.22
SDC4P-201ENST00000453285 FBXO3Q9UK99 471 aa7.4□□□□□ -1.22
SDC4P-201ENST00000453285 CHMP3Q9Y3E7 222 aa7.4□□□□□ -1.22
SDC4P-201ENST00000453285 RTL9Q8NET4 1388 aa7.39□□□□□ -1.23
SDC4P-201ENST00000453285 ABCC12Q96J65 1359 aa7.39□□□□□ -1.23
SDC4P-201ENST00000453285 AOX1Q06278 1338 aa7.39□□□□□ -1.23
SDC4P-201ENST00000453285 SEC24BO95487 1268 aa7.39□□□□□ -1.23
SDC4P-201ENST00000453285 MX1P20591 662 aa7.39□□□□□ -1.23
SDC4P-201ENST00000453285 ITGA6P23229 1130 aa7.39□□□□□ -1.23
SDC4P-201ENST00000453285 TFCP2Q12800 502 aa7.39□□□□□ -1.23
SDC4P-201ENST00000453285 IFIT5Q13325 482 aaKnown RBP7.39□□□□□ -1.23
SDC4P-201ENST00000453285 SF3B3Q15393 1217 aaKnown RBP7.39□□□□□ -1.23
SDC4P-201ENST00000453285 CCDC57Q2TAC2 916 aa7.39□□□□□ -1.23
SDC4P-201ENST00000453285 C3orf67Q6ZVT6 689 aa7.39□□□□□ -1.23
SDC4P-201ENST00000453285 CLASRPQ8N2M8 674 aaKnown RBP7.39□□□□□ -1.23
SDC4P-201ENST00000453285 PI4K2BQ8TCG2 481 aa7.39□□□□□ -1.23
SDC4P-201ENST00000453285 BCL11AQ9H165 835 aa7.39□□□□□ -1.23
SDC4P-201ENST00000453285 RBM19Q9Y4C8 960 aaKnown RBP7.39□□□□□ -1.23
SDC4P-201ENST00000453285 RIPOR2Q9Y4F9 1068 aa7.39□□□□□ -1.23
SDC4P-201ENST00000453285 CACNA1SQ13698 1873 aa7.38□□□□□ -1.23
SDC4P-201ENST00000453285 PNPLA7Q6ZV29 1317 aa7.38□□□□□ -1.23
SDC4P-201ENST00000453285 ANKRD18BA2A2Z9 1011 aa7.38□□□□□ -1.23
SDC4P-201ENST00000453285 IL15P40933 162 aaPredicted RBP7.38□□□□□ -1.23
SDC4P-201ENST00000453285 TNNI3KQ59H18 835 aa7.38□□□□□ -1.23
SDC4P-201ENST00000453285 TSHZ3Q63HK5 1081 aa7.38□□□□□ -1.23
SDC4P-201ENST00000453285 TPTE2Q6XPS3 522 aa7.38□□□□□ -1.23
SDC4P-201ENST00000453285 NYXQ9GZU5 481 aa7.38□□□□□ -1.23
SDC4P-201ENST00000453285 CCDC8Q9H0W5 538 aaPredicted RBP7.38□□□□□ -1.23
SDC4P-201ENST00000453285 ANO8Q9HCE9 1232 aaPredicted RBP7.38□□□□□ -1.23
SDC4P-201ENST00000453285 GPR108Q9NPR9 543 aa7.38□□□□□ -1.23
SDC4P-201ENST00000453285 SEC31BQ9NQW1 1179 aa7.38□□□□□ -1.23
SDC4P-201ENST00000453285 TFCP2L1Q9NZI6 479 aa7.38□□□□□ -1.23
SDC4P-201ENST00000453285 FPGT-TNNI3KV9GXZ4 949 aa7.38□□□□□ -1.23
SDC4P-201ENST00000453285 MYH13Q9UKX3 1938 aa7.38□□□□□ -1.23
SDC4P-201ENST00000453285 RIC1Q4ADV7 1423 aa7.37□□□□□ -1.23
SDC4P-201ENST00000453285 CARMIL3Q8ND23 1372 aa7.37□□□□□ -1.23
SDC4P-201ENST00000453285 TTC41PQ6P2S7 1318 aa7.37□□□□□ -1.23
SDC4P-201ENST00000453285 HSP90B1P14625 803 aaKnown RBP7.37□□□□□ -1.23
SDC4P-201ENST00000453285 SDSP20132 328 aa7.37□□□□□ -1.23
SDC4P-201ENST00000453285 DDR1Q08345 913 aa7.37□□□□□ -1.23
SDC4P-201ENST00000453285 DEFB132Q7Z7B7 95 aa7.37□□□□□ -1.23
SDC4P-201ENST00000453285 AACSQ86V21 672 aa7.37□□□□□ -1.23
SDC4P-201ENST00000453285 NBPF5PQ86XG9 351 aaPredicted RBP7.37□□□□□ -1.23
SDC4P-201ENST00000453285 CCDC24Q8N4L8 307 aa7.37□□□□□ -1.23
SDC4P-201ENST00000453285 VGLL2Q8N8G2 317 aa7.37□□□□□ -1.23
SDC4P-201ENST00000453285 FLAD1Q8NFF5 587 aa7.37□□□□□ -1.23
SDC4P-201ENST00000453285 TLR7Q9NYK1 1049 aaKnown RBP7.37□□□□□ -1.23
SDC4P-201ENST00000453285 ZNF609O15014 1411 aa7.36□□□□□ -1.23
SDC4P-201ENST00000453285 POLRMTO00411 1230 aaKnown RBP7.36□□□□□ -1.23
SDC4P-201ENST00000453285 SERPINB2P05120 415 aa7.36□□□□□ -1.23
SDC4P-201ENST00000453285 IFIT2P09913 472 aaKnown RBP7.36□□□□□ -1.23
SDC4P-201ENST00000453285 BAG6P46379 1132 aa7.36□□□□□ -1.23
SDC4P-201ENST00000453285 TIMM10P62072 90 aa7.36□□□□□ -1.23
SDC4P-201ENST00000453285 SLC15A2Q16348 729 aa7.36□□□□□ -1.23
SDC4P-201ENST00000453285 CCDC152Q4G0S7 254 aa7.36□□□□□ -1.23
SDC4P-201ENST00000453285 PRR5LQ6MZQ0 368 aa7.36□□□□□ -1.23
SDC4P-201ENST00000453285 LDHAL6AQ6ZMR3 332 aa7.36□□□□□ -1.23
SDC4P-201ENST00000453285 DBNDD2Q9BQY9 259 aa7.36□□□□□ -1.23
SDC4P-201ENST00000453285 ECHDC1Q9NTX5 307 aa7.36□□□□□ -1.23
SDC4P-201ENST00000453285 CEP126Q9P2H0 1117 aa7.36□□□□□ -1.23
SDC4P-201ENST00000453285 DBNLQ9UJU6 430 aaKnown RBP7.36□□□□□ -1.23
SDC4P-201ENST00000453285 COL11A2P13942 1736 aaPredicted RBP7.35□□□□□ -1.23
SDC4P-201ENST00000453285 A0A1B0GUL7 405 aa7.35□□□□□ -1.23
SDC4P-201ENST00000453285 GLRX3O76003 335 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms