RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
CHD3-206ENST00000452447 EAPPQ56P03 285 aaPredicted RBP16.6■□□□□ 0.25
CHD3-206ENST00000452447 KLRG1Q96E93 195 aa16.6■□□□□ 0.25
CHD3-206ENST00000452447 MYD88Q99836 296 aa16.6■□□□□ 0.25
CHD3-206ENST00000452447 STK31Q9BXU1 1019 aa16.6■□□□□ 0.25
CHD3-206ENST00000452447 IRS4O14654 1257 aaPredicted RBP16.59■□□□□ 0.25
CHD3-206ENST00000452447 HSP90B1P14625 803 aaKnown RBP16.59■□□□□ 0.25
CHD3-206ENST00000452447 EPHX2P34913 555 aa16.59■□□□□ 0.25
CHD3-206ENST00000452447 SF3B3Q15393 1217 aaKnown RBP16.59■□□□□ 0.25
CHD3-206ENST00000452447 AOC3Q16853 763 aa16.59■□□□□ 0.25
CHD3-206ENST00000452447 TMC4Q7Z404 712 aa16.59■□□□□ 0.25
CHD3-206ENST00000452447 LDHDQ86WU2 507 aa16.59■□□□□ 0.25
CHD3-206ENST00000452447 SALL2Q9Y467 1007 aaPredicted RBP16.59■□□□□ 0.25
CHD3-206ENST00000452447 IL16Q14005 1332 aa16.58■□□□□ 0.25
CHD3-206ENST00000452447 TWISTNBQ3B726 338 aaPredicted RBP16.58■□□□□ 0.24
CHD3-206ENST00000452447 PNMA8AQ86V59 439 aaPredicted RBP16.58■□□□□ 0.24
CHD3-206ENST00000452447 ZBTB38Q8NAP3 1195 aaPredicted RBP16.58■□□□□ 0.24
CHD3-206ENST00000452447 CCDC191Q8NCU4 936 aa16.58■□□□□ 0.24
CHD3-206ENST00000452447 CLEC11AQ9Y240 323 aa16.58■□□□□ 0.24
CHD3-206ENST00000452447 LMOD1P29536 600 aaPredicted RBP16.57■□□□□ 0.24
CHD3-206ENST00000452447 METTL22Q9BUU2 404 aaPredicted RBP16.57■□□□□ 0.24
CHD3-206ENST00000452447 RTFDC1Q9BY42 306 aaPredicted RBP16.57■□□□□ 0.24
CHD3-206ENST00000452447 COL4A5P29400 1685 aa16.57■□□□□ 0.24
CHD3-206ENST00000452447 CWC25Q9NXE8 425 aaPredicted RBP16.56■□□□□ 0.24
CHD3-206ENST00000452447 MAP3K2Q9Y2U5 619 aa16.56■□□□□ 0.24
CHD3-206ENST00000452447 KSR2Q6VAB6 950 aa16.55■□□□□ 0.24
CHD3-206ENST00000452447 CELF1Q92879 486 aaKnown RBP16.55■□□□□ 0.24
CHD3-206ENST00000452447 ZNRF3Q9ULT6 936 aa16.55■□□□□ 0.24
CHD3-206ENST00000452447 CACNA1FO60840 1977 aa16.55■□□□□ 0.24
CHD3-206ENST00000452447 PI4KAP2A4QPH2 592 aa16.55■□□□□ 0.24
CHD3-206ENST00000452447 NEXNQ0ZGT2 675 aa16.55■□□□□ 0.24
CHD3-206ENST00000452447 WDR63Q8IWG1 891 aa16.55■□□□□ 0.24
CHD3-206ENST00000452447 FAM9BQ8IZU0 186 aa16.55■□□□□ 0.24
CHD3-206ENST00000452447 PI4KAP1Q8N8J0 262 aa16.55■□□□□ 0.24
CHD3-206ENST00000452447 SLC4A2P04920 1241 aa16.54■□□□□ 0.24
CHD3-206ENST00000452447 PCCAP05165 728 aaPredicted RBP16.54■□□□□ 0.24
CHD3-206ENST00000452447 KIAA2012Q0VF49 1180 aa16.54■□□□□ 0.24
CHD3-206ENST00000452447 NSFL1CQ9UNZ2 370 aaKnown RBP16.54■□□□□ 0.24
CHD3-206ENST00000452447 PDE8AO60658 829 aa16.53■□□□□ 0.24
CHD3-206ENST00000452447 RPS8P62241 208 aaKnown RBP16.53■□□□□ 0.24
CHD3-206ENST00000452447 CREBZFQ9NS37 354 aa16.53■□□□□ 0.24
CHD3-206ENST00000452447 FANCIQ9NVI1 1328 aa16.53■□□□□ 0.24
CHD3-206ENST00000452447 SCNN1DP51172 638 aa16.52■□□□□ 0.24
CHD3-206ENST00000452447 CCDC152Q4G0S7 254 aa16.52■□□□□ 0.24
CHD3-206ENST00000452447 JMYQ8N9B5 988 aa16.52■□□□□ 0.24
CHD3-206ENST00000452447 LRRC37AA6NMS7 1700 aa16.52■□□□□ 0.24
CHD3-206ENST00000452447 EPS15P42566 896 aa16.51■□□□□ 0.23
CHD3-206ENST00000452447 CXCL9Q07325 125 aa16.51■□□□□ 0.23
CHD3-206ENST00000452447 WASHC4Q2M389 1173 aa16.51■□□□□ 0.23
CHD3-206ENST00000452447 JARID2Q92833 1246 aaPredicted RBP16.51■□□□□ 0.23
CHD3-206ENST00000452447 PASKQ96RG2 1323 aa16.51■□□□□ 0.23
CHD3-206ENST00000452447 C6orf229H3BNL8 230 aa16.51■□□□□ 0.23
CHD3-206ENST00000452447 TNIP1Q15025 636 aa16.51■□□□□ 0.23
CHD3-206ENST00000452447 CIAPIN1Q6FI81 312 aa16.51■□□□□ 0.23
CHD3-206ENST00000452447 CNTROBQ8N137 903 aa16.51■□□□□ 0.23
CHD3-206ENST00000452447 SEC31BQ9NQW1 1179 aa16.51■□□□□ 0.23
CHD3-206ENST00000452447 RAD17O75943 681 aa16.5■□□□□ 0.23
CHD3-206ENST00000452447 ITGBL1O95965 494 aaPredicted RBP16.5■□□□□ 0.23
CHD3-206ENST00000452447 IGKV5-2P06315 115 aa16.5■□□□□ 0.23
CHD3-206ENST00000452447 MAP1SQ66K74 1059 aaPredicted RBP16.5■□□□□ 0.23
CHD3-206ENST00000452447 USP50Q70EL3 339 aaPredicted RBP16.5■□□□□ 0.23
CHD3-206ENST00000452447 G2E3Q7L622 706 aa16.5■□□□□ 0.23
CHD3-206ENST00000452447 CCDC85AQ96PX6 553 aaPredicted RBP16.5■□□□□ 0.23
CHD3-206ENST00000452447 ADAMTSL1Q8N6G6 1762 aa16.5■□□□□ 0.23
CHD3-206ENST00000452447 MYH3P11055 1940 aa16.49■□□□□ 0.23
CHD3-206ENST00000452447 CDHR2Q9BYE9 1310 aa16.49■□□□□ 0.23
CHD3-206ENST00000452447 LTBP1Q14766 1721 aa16.49■□□□□ 0.23
CHD3-206ENST00000452447 GPSM2P81274 684 aa16.49■□□□□ 0.23
CHD3-206ENST00000452447 FLIIQ13045 1269 aa16.49■□□□□ 0.23
CHD3-206ENST00000452447 FKBP5Q13451 457 aaPredicted RBP16.49■□□□□ 0.23
CHD3-206ENST00000452447 EYA3Q99504 573 aa16.49■□□□□ 0.23
CHD3-206ENST00000452447 BCL2L13Q9BXK5 485 aa16.49■□□□□ 0.23
CHD3-206ENST00000452447 MYH16Q9H6N6 1097 aa16.49■□□□□ 0.23
CHD3-206ENST00000452447 GPRC5DQ9NZD1 345 aa16.49■□□□□ 0.23
CHD3-206ENST00000452447 ANKIB1Q9P2G1 1089 aa16.49■□□□□ 0.23
CHD3-206ENST00000452447 TMEM88BA6NKF7 163 aa16.48■□□□□ 0.23
CHD3-206ENST00000452447 RIMBP2O15034 1052 aa16.48■□□□□ 0.23
CHD3-206ENST00000452447 VAMP4O75379 141 aa16.48■□□□□ 0.23
CHD3-206ENST00000452447 EXOSC9Q06265 439 aaKnown RBP16.48■□□□□ 0.23
CHD3-206ENST00000452447 CWF19L2Q2TBE0 894 aaKnown RBP16.48■□□□□ 0.23
CHD3-206ENST00000452447 ADARB2Q9NS39 739 aaKnown RBP16.48■□□□□ 0.23
CHD3-206ENST00000452447 POLLQ9UGP5 575 aa16.48■□□□□ 0.23
CHD3-206ENST00000452447 MKRN1Q9UHC7 482 aaKnown RBP16.48■□□□□ 0.23
CHD3-206ENST00000452447 DUOX1Q9NRD9 1551 aa16.48■□□□□ 0.23
CHD3-206ENST00000452447 NEURL1BA8MQ27 555 aa16.47■□□□□ 0.23
CHD3-206ENST00000452447 GMPSP49915 693 aaPredicted RBP16.47■□□□□ 0.23
CHD3-206ENST00000452447 COL4A1P02462 1669 aa16.47■□□□□ 0.23
CHD3-206ENST00000452447 CTSWP56202 376 aa16.47■□□□□ 0.23
CHD3-206ENST00000452447 ANKRD18AQ8IVF6 992 aa16.47■□□□□ 0.23
CHD3-206ENST00000452447 TBC1D16Q8TBP0 767 aa16.47■□□□□ 0.23
CHD3-206ENST00000452447 ZC3H12CQ9C0D7 883 aaKnown RBP16.47■□□□□ 0.23
CHD3-206ENST00000452447 DBNDD1Q9H9R9 158 aa16.47■□□□□ 0.23
CHD3-206ENST00000452447 YDJCA8MPS7 323 aa16.46■□□□□ 0.23
CHD3-206ENST00000452447 G3V3G9 751 aa16.46■□□□□ 0.23
CHD3-206ENST00000452447 DCAF8Q5TAQ9 597 aa16.46■□□□□ 0.23
CHD3-206ENST00000452447 UBE3BQ7Z3V4 1068 aa16.46■□□□□ 0.23
CHD3-206ENST00000452447 DNAAF4Q8WXU2 420 aa16.46■□□□□ 0.23
CHD3-206ENST00000452447 CDC5LQ99459 802 aaKnown RBP16.46■□□□□ 0.23
CHD3-206ENST00000452447 PODXL2Q9NZ53 605 aa16.46■□□□□ 0.23
CHD3-206ENST00000452447 UFL1O94874 794 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms