RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 FOXO4P98177 505 aa30.27■■■□□ 2.44
CPSF4-207ENST00000451876 CCDC85AQ96PX6 553 aaPredicted RBP30.27■■■□□ 2.44
CPSF4-207ENST00000451876 HSP90B1P14625 803 aaKnown RBP30.26■■■□□ 2.44
CPSF4-207ENST00000451876 SF3B3Q15393 1217 aaKnown RBP30.26■■■□□ 2.44
CPSF4-207ENST00000451876 TTLL11Q8NHH1 800 aa30.25■■■□□ 2.43
CPSF4-207ENST00000451876 PDZRN3Q9UPQ7 1066 aa30.25■■■□□ 2.43
CPSF4-207ENST00000451876 SLX4Q8IY92 1834 aa30.25■■■□□ 2.43
CPSF4-207ENST00000451876 ZBTB7BO15156 539 aaPredicted RBP30.25■■■□□ 2.43
CPSF4-207ENST00000451876 RPGRQ92834 1020 aaKnown RBP30.25■■■□□ 2.43
CPSF4-207ENST00000451876 ZNF622Q969S3 477 aaKnown RBP eCLIP30.25■■■□□ 2.43
CPSF4-207ENST00000451876 MASTLQ96GX5 879 aa30.25■■■□□ 2.43
CPSF4-207ENST00000451876 UTRNP46939 3433 aa30.25■■■□□ 2.43
CPSF4-207ENST00000451876 SPEF2Q9C093 1822 aa30.24■■■□□ 2.43
CPSF4-207ENST00000451876 NPR1P16066 1061 aa30.24■■■□□ 2.43
CPSF4-207ENST00000451876 BICC1Q9H694 974 aaKnown RBP30.24■■■□□ 2.43
CPSF4-207ENST00000451876 GNAI3P08754 354 aa30.23■■■□□ 2.43
CPSF4-207ENST00000451876 LRRFIP2Q9Y608 721 aaKnown RBP30.23■■■□□ 2.43
CPSF4-207ENST00000451876 HOXA10P31260 410 aaPredicted RBP30.22■■■□□ 2.43
CPSF4-207ENST00000451876 STYK1Q6J9G0 422 aa30.22■■■□□ 2.43
CPSF4-207ENST00000451876 GREM2Q9H772 168 aa30.22■■■□□ 2.43
CPSF4-207ENST00000451876 DDX19BQ9UMR2 479 aa30.22■■■□□ 2.43
CPSF4-207ENST00000451876 ARFGEF1Q9Y6D6 1849 aa30.21■■■□□ 2.43
CPSF4-207ENST00000451876 CENPBP07199 599 aaPredicted RBP30.21■■■□□ 2.43
CPSF4-207ENST00000451876 CSF1RP07333 972 aa30.21■■■□□ 2.43
CPSF4-207ENST00000451876 CCDC152Q4G0S7 254 aa30.21■■■□□ 2.43
CPSF4-207ENST00000451876 LMBR1LQ6UX01 489 aa30.21■■■□□ 2.43
CPSF4-207ENST00000451876 ANKRD44Q8N8A2 993 aa30.21■■■□□ 2.43
CPSF4-207ENST00000451876 PIM2Q9P1W9 311 aa30.21■■■□□ 2.43
CPSF4-207ENST00000451876 FAM161AQ3B820 660 aa30.2■■■□□ 2.43
CPSF4-207ENST00000451876 SEC31BQ9NQW1 1179 aa30.2■■■□□ 2.43
CPSF4-207ENST00000451876 RABL6Q3YEC7 729 aaPredicted RBP30.19■■■□□ 2.42
CPSF4-207ENST00000451876 RBM17Q96I25 401 aaKnown RBP30.18■■■□□ 2.42
CPSF4-207ENST00000451876 C1orf115Q9H7X2 142 aa30.18■■■□□ 2.42
CPSF4-207ENST00000451876 RTL9Q8NET4 1388 aa30.18■■■□□ 2.42
CPSF4-207ENST00000451876 DDX46Q7L014 1031 aaKnown RBP30.18■■■□□ 2.42
CPSF4-207ENST00000451876 CRAMP1Q96RY5 1269 aa30.18■■■□□ 2.42
CPSF4-207ENST00000451876 PRPF40BQ6NWY9 871 aaKnown RBP30.17■■■□□ 2.42
CPSF4-207ENST00000451876 TTLL6Q8N841 843 aa30.17■■■□□ 2.42
CPSF4-207ENST00000451876 CHMP3Q9Y3E7 222 aa30.17■■■□□ 2.42
CPSF4-207ENST00000451876 GNAI2P04899 355 aa30.16■■■□□ 2.42
CPSF4-207ENST00000451876 SLC51AQ86UW1 340 aa30.16■■■□□ 2.42
CPSF4-207ENST00000451876 CELF1Q92879 486 aaKnown RBP30.16■■■□□ 2.42
CPSF4-207ENST00000451876 CNKSR1Q969H4 720 aa30.16■■■□□ 2.42
CPSF4-207ENST00000451876 CRBNQ96SW2 442 aa30.16■■■□□ 2.42
CPSF4-207ENST00000451876 ITGA6P23229 1130 aa30.14■■■□□ 2.42
CPSF4-207ENST00000451876 ALDH1B1P30837 517 aa30.14■■■□□ 2.42
CPSF4-207ENST00000451876 DALRD3Q5D0E6 543 aaKnown RBP30.14■■■□□ 2.42
CPSF4-207ENST00000451876 ZBTB40Q9NUA8 1239 aa30.14■■■□□ 2.42
CPSF4-207ENST00000451876 BCS1LQ9Y276 419 aa30.14■■■□□ 2.42
CPSF4-207ENST00000451876 LRRC37AA6NMS7 1700 aa30.14■■■□□ 2.42
CPSF4-207ENST00000451876 GRAPQ13588 217 aa30.14■■■□□ 2.41
CPSF4-207ENST00000451876 GRAPLQ8TC17 118 aaPredicted RBP30.14■■■□□ 2.41
CPSF4-207ENST00000451876 HDAC5Q9UQL6 1122 aa30.13■■■□□ 2.41
CPSF4-207ENST00000451876 YBX3P16989 372 aaKnown RBP eCLIP30.11■■■□□ 2.419e-7■□□□□ 10.2
CPSF4-207ENST00000451876 IRX6P78412 446 aaPredicted RBP30.11■■■□□ 2.41
CPSF4-207ENST00000451876 PELP1Q8IZL8 1130 aaKnown RBP30.11■■■□□ 2.41
CPSF4-207ENST00000451876 PPEF1O14829 653 aaPredicted RBP30.1■■■□□ 2.41
CPSF4-207ENST00000451876 IFIT5Q13325 482 aaKnown RBP30.1■■■□□ 2.41
CPSF4-207ENST00000451876 OLFM4Q6UX06 510 aa30.1■■■□□ 2.41
CPSF4-207ENST00000451876 ZNF219Q9P2Y4 722 aaPredicted RBP30.1■■■□□ 2.41
CPSF4-207ENST00000451876 ANKRD18BA2A2Z9 1011 aa30.09■■■□□ 2.41
CPSF4-207ENST00000451876 CDC5LQ99459 802 aaKnown RBP30.09■■■□□ 2.41
CPSF4-207ENST00000451876 RPS8P62241 208 aaKnown RBP30.08■■■□□ 2.41
CPSF4-207ENST00000451876 MTX1Q13505 466 aa30.08■■■□□ 2.41
CPSF4-207ENST00000451876 CCDC57Q2TAC2 916 aa30.08■■■□□ 2.41
CPSF4-207ENST00000451876 C7orf43Q8WVR3 580 aa30.08■■■□□ 2.41
CPSF4-207ENST00000451876 ZNF594Q96JF6 807 aaPredicted RBP30.08■■■□□ 2.41
CPSF4-207ENST00000451876 A0A1B0GUL6 1792 aa30.08■■■□□ 2.41
CPSF4-207ENST00000451876 C21orf2O43822 256 aa30.07■■■□□ 2.4
CPSF4-207ENST00000451876 ANKRD18AQ8IVF6 992 aa30.07■■■□□ 2.4
CPSF4-207ENST00000451876 CHMP4BQ9H444 224 aaKnown RBP30.07■■■□□ 2.4
CPSF4-207ENST00000451876 BBOX1O75936 387 aa30.07■■■□□ 2.4
CPSF4-207ENST00000451876 KLHDC4Q8TBB5 520 aa30.07■■■□□ 2.4
CPSF4-207ENST00000451876 FER1L6Q2WGJ9 1857 aa30.06■■■□□ 2.4
CPSF4-207ENST00000451876 PNMA6EA0A0J9YXQ4 647 aa30.06■■■□□ 2.4
CPSF4-207ENST00000451876 RFX5P48382 616 aaPredicted RBP30.06■■■□□ 2.4
CPSF4-207ENST00000451876 SNED1Q8TER0 1413 aa30.05■■■□□ 2.4
CPSF4-207ENST00000451876 SRGAP3O43295 1099 aa30.04■■■□□ 2.4
CPSF4-207ENST00000451876 CEP85Q6P2H3 762 aa30.04■■■□□ 2.4
CPSF4-207ENST00000451876 EXOC6Q8TAG9 804 aa30.04■■■□□ 2.4
CPSF4-207ENST00000451876 LTBP1Q14766 1721 aa30.04■■■□□ 2.4
CPSF4-207ENST00000451876 ATP6V0A2Q9Y487 856 aa30.04■■■□□ 2.4
CPSF4-207ENST00000451876 IGHMBP2P38935 993 aaKnown RBP30.03■■■□□ 2.4
CPSF4-207ENST00000451876 GPR162Q16538 588 aa30.03■■■□□ 2.4
CPSF4-207ENST00000451876 TAF7LQ5H9L4 462 aa30.02■■■□□ 2.4
CPSF4-207ENST00000451876 PTPN12Q05209 780 aaKnown RBP30.01■■■□□ 2.39
CPSF4-207ENST00000451876 BSDC1Q9NW68 430 aaPredicted RBP30.01■■■□□ 2.39
CPSF4-207ENST00000451876 ATP8B2P98198 1209 aa30■■■□□ 2.39
CPSF4-207ENST00000451876 TMC4Q7Z404 712 aa30■■■□□ 2.39
CPSF4-207ENST00000451876 SP8Q8IXZ3 490 aa30■■■□□ 2.39
CPSF4-207ENST00000451876 MPHOSPH8Q99549 860 aa30■■■□□ 2.39
CPSF4-207ENST00000451876 PUS3Q9BZE2 481 aaKnown RBP30■■■□□ 2.39
CPSF4-207ENST00000451876 PA2G4Q9UQ80 394 aaKnown RBP30■■■□□ 2.39
CPSF4-207ENST00000451876 DUOX1Q9NRD9 1551 aa29.99■■■□□ 2.39
CPSF4-207ENST00000451876 LDHAL6AQ6ZMR3 332 aa29.99■■■□□ 2.39
CPSF4-207ENST00000451876 SIRT2Q8IXJ6 389 aa29.99■■■□□ 2.39
CPSF4-207ENST00000451876 POLA2Q14181 598 aa29.98■■■□□ 2.39
CPSF4-207ENST00000451876 CCDC93Q567U6 631 aa29.98■■■□□ 2.39
CPSF4-207ENST00000451876 SSH3Q8TE77 659 aa29.97■■■□□ 2.39
CPSF4-207ENST00000451876 LRRC24Q50LG9 513 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms