RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 HSPA1AP0DMV8 641 aaKnown RBP35.18■■■■□ 3.22
USP42-204ENST00000451154 HSPA1BP0DMV9 641 aaKnown RBP35.18■■■■□ 3.22
USP42-204ENST00000451154 SCNN1DP51172 638 aa35.18■■■■□ 3.22
USP42-204ENST00000451154 ADAMTSL1Q8N6G6 1762 aa35.18■■■■□ 3.22
USP42-204ENST00000451154 CALD1Q05682 793 aaKnown RBP35.17■■■■□ 3.22
USP42-204ENST00000451154 RTL5Q5HYW3 569 aaPredicted RBP35.17■■■■□ 3.22
USP42-204ENST00000451154 TMEM88BA6NKF7 163 aa35.16■■■■□ 3.22
USP42-204ENST00000451154 PHAXQ9H814 394 aaKnown RBP35.16■■■■□ 3.22
USP42-204ENST00000451154 ZNRF3Q9ULT6 936 aa35.15■■■■□ 3.22
USP42-204ENST00000451154 LTBP1Q14766 1721 aa35.15■■■■□ 3.22
USP42-204ENST00000451154 CCDC184Q52MB2 194 aa35.14■■■■□ 3.22
USP42-204ENST00000451154 RIC3Q7Z5B4 369 aa35.14■■■■□ 3.22
USP42-204ENST00000451154 C8orf58Q8NAV2 365 aa35.14■■■■□ 3.22
USP42-204ENST00000451154 CXCL9Q07325 125 aa35.13■■■■□ 3.21
USP42-204ENST00000451154 TRIM28Q13263 835 aaKnown RBP35.13■■■■□ 3.21
USP42-204ENST00000451154 SF3B3Q15393 1217 aaKnown RBP35.12■■■■□ 3.21
USP42-204ENST00000451154 DDX60Q8IY21 1712 aaKnown RBP35.12■■■■□ 3.21
USP42-204ENST00000451154 CNTNAP1P78357 1384 aa35.12■■■■□ 3.21
USP42-204ENST00000451154 GOLGA2Q08379 1002 aa35.1■■■■□ 3.21
USP42-204ENST00000451154 KIAA2012Q0VF49 1180 aa35.1■■■■□ 3.21
USP42-204ENST00000451154 CELF1Q92879 486 aaKnown RBP35.1■■■■□ 3.21
USP42-204ENST00000451154 IRS4O14654 1257 aaPredicted RBP35.09■■■■□ 3.21
USP42-204ENST00000451154 TMC4Q7Z404 712 aa35.09■■■■□ 3.21
USP42-204ENST00000451154 USP50Q70EL3 339 aaPredicted RBP35.08■■■■□ 3.21
USP42-204ENST00000451154 VEGFBP49765 207 aa35.07■■■■□ 3.2
USP42-204ENST00000451154 MYD88Q99836 296 aa35.07■■■■□ 3.2
USP42-204ENST00000451154 GPRC5DQ9NZD1 345 aa35.07■■■■□ 3.2
USP42-204ENST00000451154 RAD17O75943 681 aa35.06■■■■□ 3.2
USP42-204ENST00000451154 GMPSP49915 693 aaPredicted RBP35.05■■■■□ 3.2
USP42-204ENST00000451154 FMR1Q06787 632 aaKnown RBP eCLIP35.05■■■■□ 3.2
USP42-204ENST00000451154 CIAPIN1Q6FI81 312 aa35.05■■■■□ 3.2
USP42-204ENST00000451154 TSPYL6Q8N831 410 aa35.05■■■■□ 3.2
USP42-204ENST00000451154 NSFL1CQ9UNZ2 370 aaKnown RBP35.05■■■■□ 3.2
USP42-204ENST00000451154 ZBTB38Q8NAP3 1195 aaPredicted RBP35.04■■■■□ 3.2
USP42-204ENST00000451154 ADARB2Q9NS39 739 aaKnown RBP35.04■■■■□ 3.2
USP42-204ENST00000451154 CCDC30Q5VVM6 783 aa35.03■■■■□ 3.2
USP42-204ENST00000451154 YDJCA8MPS7 323 aa35.02■■■■□ 3.2
USP42-204ENST00000451154 TNIP1Q15025 636 aa35.02■■■■□ 3.2
USP42-204ENST00000451154 JARID2Q92833 1246 aaPredicted RBP35.02■■■■□ 3.2
USP42-204ENST00000451154 DEFB115Q30KQ5 88 aa35.01■■■■□ 3.2
USP42-204ENST00000451154 TSR2Q969E8 191 aaKnown RBP35.01■■■■□ 3.2
USP42-204ENST00000451154 RPS8P62241 208 aaKnown RBP35■■■■□ 3.19
USP42-204ENST00000451154 GPSM2P81274 684 aa35■■■■□ 3.19
USP42-204ENST00000451154 WASHC4Q2M389 1173 aa35■■■■□ 3.19
USP42-204ENST00000451154 TNS4Q8IZW8 715 aa35■■■■□ 3.19
USP42-204ENST00000451154 BCL2L13Q9BXK5 485 aa35■■■■□ 3.19
USP42-204ENST00000451154 ABT1Q9ULW3 272 aaKnown RBP35■■■■□ 3.19
USP42-204ENST00000451154 COL4A1P02462 1669 aa35■■■■□ 3.19
USP42-204ENST00000451154 C6orf229H3BNL8 230 aa34.99■■■■□ 3.19
USP42-204ENST00000451154 TRAF5O00463 557 aa34.99■■■■□ 3.19
USP42-204ENST00000451154 RIMBP2O15034 1052 aa34.99■■■■□ 3.19
USP42-204ENST00000451154 CCDC191Q8NCU4 936 aa34.99■■■■□ 3.19
USP42-204ENST00000451154 POLLQ9UGP5 575 aa34.99■■■■□ 3.19
USP42-204ENST00000451154 DUOX1Q9NRD9 1551 aa34.99■■■■□ 3.19
USP42-204ENST00000451154 METTL22Q9BUU2 404 aaPredicted RBP34.98■■■■□ 3.19
USP42-204ENST00000451154 CHMP4AQ9BY43 222 aa34.98■■■■□ 3.19
USP42-204ENST00000451154 SEC31BQ9NQW1 1179 aa34.98■■■■□ 3.19
USP42-204ENST00000451154 LRRC37AA6NMS7 1700 aa34.98■■■■□ 3.19
USP42-204ENST00000451154 RASSF10A6NK89 507 aa34.97■■■■□ 3.19
USP42-204ENST00000451154 DDX58O95786 925 aaKnown RBP34.97■■■■□ 3.19
USP42-204ENST00000451154 PCCAP05165 728 aaPredicted RBP34.96■■■■□ 3.19
USP42-204ENST00000451154 DBNDD1Q9H9R9 158 aa34.96■■■■□ 3.19
USP42-204ENST00000451154 CWC25Q9NXE8 425 aaPredicted RBP34.96■■■■□ 3.19
USP42-204ENST00000451154 HSP90B1P14625 803 aaKnown RBP34.95■■■■□ 3.19
USP42-204ENST00000451154 WWC1Q8IX03 1113 aa34.95■■■■□ 3.19
USP42-204ENST00000451154 MAP3K2Q9Y2U5 619 aa34.95■■■■□ 3.19
USP42-204ENST00000451154 FOXN1O15353 648 aa34.94■■■■□ 3.18
USP42-204ENST00000451154 CCDC27Q2M243 656 aa34.94■■■■□ 3.18
USP42-204ENST00000451154 CST9Q5W186 159 aa34.94■■■■□ 3.18
USP42-204ENST00000451154 CNOT7Q9UIV1 285 aaKnown RBP34.94■■■■□ 3.18
USP42-204ENST00000451154 SHTN1A0MZ66 631 aa34.93■■■■□ 3.18
USP42-204ENST00000451154 HIRAP54198 1017 aaPredicted RBP34.93■■■■□ 3.18
USP42-204ENST00000451154 GPR101Q96P66 508 aaPredicted RBP34.93■■■■□ 3.18
USP42-204ENST00000451154 CCDC85AQ96PX6 553 aaPredicted RBP34.93■■■■□ 3.18
USP42-204ENST00000451154 ZBTB12Q9Y330 459 aaPredicted RBP34.93■■■■□ 3.18
USP42-204ENST00000451154 PDE8AO60658 829 aa34.92■■■■□ 3.18
USP42-204ENST00000451154 DOK7Q18PE1 504 aa34.92■■■■□ 3.18
USP42-204ENST00000451154 TBC1D16Q8TBP0 767 aa34.92■■■■□ 3.18
USP42-204ENST00000451154 CDHR2Q9BYE9 1310 aa34.91■■■■□ 3.18
USP42-204ENST00000451154 PI4KAP2A4QPH2 592 aa34.91■■■■□ 3.18
USP42-204ENST00000451154 PSMD14O00487 310 aa34.91■■■■□ 3.18
USP42-204ENST00000451154 CCDC152Q4G0S7 254 aa34.91■■■■□ 3.18
USP42-204ENST00000451154 KSR2Q6VAB6 950 aa34.91■■■■□ 3.18
USP42-204ENST00000451154 PI4KAP1Q8N8J0 262 aa34.91■■■■□ 3.18
USP42-204ENST00000451154 EYA3Q99504 573 aa34.91■■■■□ 3.18
USP42-204ENST00000451154 KCNQ5Q9NR82 932 aa34.91■■■■□ 3.18
USP42-204ENST00000451154 TRPM7Q96QT4 1865 aa34.9■■■■□ 3.18
USP42-204ENST00000451154 WDR33Q9C0J8 1336 aaKnown RBP34.9■■■■□ 3.18
USP42-204ENST00000451154 TRPM4Q8TD43 1214 aa34.9■■■■□ 3.18
USP42-204ENST00000451154 PGAP2Q9UHJ9 254 aa34.9■■■■□ 3.18
USP42-204ENST00000451154 H7C1D1 291 aa34.89■■■■□ 3.18
USP42-204ENST00000451154 CAPN15O75808 1086 aa34.89■■■■□ 3.18
USP42-204ENST00000451154 STK31Q9BXU1 1019 aa34.89■■■■□ 3.18
USP42-204ENST00000451154 MRS2Q9HD23 443 aa34.89■■■■□ 3.18
USP42-204ENST00000451154 WBP1LQ9NX94 342 aa34.89■■■■□ 3.18
USP42-204ENST00000451154 IGKV5-2P06315 115 aa34.88■■■■□ 3.17
USP42-204ENST00000451154 TWISTNBQ3B726 338 aaPredicted RBP34.88■■■■□ 3.17
USP42-204ENST00000451154 MICALL2Q8IY33 904 aa34.88■■■■□ 3.17
USP42-204ENST00000451154 AIDAQ96BJ3 306 aa34.88■■■■□ 3.17
USP42-204ENST00000451154 GLIS2Q9BZE0 524 aaPredicted RBP34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms