RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 LAS1LQ9Y4W2 734 aaKnown RBP13.35□□□□□ -0.27
LINC01004-202ENST00000450686 ABT1Q9ULW3 272 aaKnown RBP13.34□□□□□ -0.27
LINC01004-202ENST00000450686 DDX60Q8IY21 1712 aaKnown RBP13.33□□□□□ -0.27
LINC01004-202ENST00000450686 SHTN1A0MZ66 631 aa13.33□□□□□ -0.28
LINC01004-202ENST00000450686 LMOD1P29536 600 aaPredicted RBP13.33□□□□□ -0.28
LINC01004-202ENST00000450686 PPP1R42Q7Z4L9 355 aa13.33□□□□□ -0.28
LINC01004-202ENST00000450686 PNMA8AQ86V59 439 aaPredicted RBP13.33□□□□□ -0.28
LINC01004-202ENST00000450686 NLRP10Q86W26 655 aa13.33□□□□□ -0.28
LINC01004-202ENST00000450686 NIM1KQ8IY84 436 aa13.33□□□□□ -0.28
LINC01004-202ENST00000450686 NLRP3Q96P20 1036 aa13.33□□□□□ -0.28
LINC01004-202ENST00000450686 ERBB4Q15303 1308 aa13.33□□□□□ -0.28
LINC01004-202ENST00000450686 TRPM7Q96QT4 1865 aa13.32□□□□□ -0.28
LINC01004-202ENST00000450686 MNX1P50219 401 aaPredicted RBP13.32□□□□□ -0.28
LINC01004-202ENST00000450686 LBX1P52954 281 aa13.32□□□□□ -0.28
LINC01004-202ENST00000450686 DDX10Q13206 875 aaKnown RBP13.32□□□□□ -0.28
LINC01004-202ENST00000450686 PARP10Q53GL7 1025 aa13.32□□□□□ -0.28
LINC01004-202ENST00000450686 CC2D2BQ6DHV5 1058 aa13.32□□□□□ -0.28
LINC01004-202ENST00000450686 PAXIP1Q6ZW49 1069 aaPredicted RBP13.32□□□□□ -0.28
LINC01004-202ENST00000450686 DDX21Q9NR30 783 aaKnown RBP eCLIP13.32□□□□□ -0.28
LINC01004-202ENST00000450686 CHPF2Q9P2E5 772 aa13.32□□□□□ -0.28
LINC01004-202ENST00000450686 ATP6V0A2Q9Y487 856 aa13.32□□□□□ -0.28
LINC01004-202ENST00000450686 DUOX1Q9NRD9 1551 aa13.32□□□□□ -0.28
LINC01004-202ENST00000450686 RASSF10A6NK89 507 aa13.31□□□□□ -0.28
LINC01004-202ENST00000450686 RAD17O75943 681 aa13.31□□□□□ -0.28
LINC01004-202ENST00000450686 GMPSP49915 693 aaPredicted RBP13.31□□□□□ -0.28
LINC01004-202ENST00000450686 CXCL9Q07325 125 aa13.31□□□□□ -0.28
LINC01004-202ENST00000450686 DEFB115Q30KQ5 88 aa13.31□□□□□ -0.28
LINC01004-202ENST00000450686 RTL5Q5HYW3 569 aaPredicted RBP13.31□□□□□ -0.28
LINC01004-202ENST00000450686 CYP4F22Q6NT55 531 aa13.31□□□□□ -0.28
LINC01004-202ENST00000450686 DLK2Q6UY11 383 aa13.31□□□□□ -0.28
LINC01004-202ENST00000450686 MIER1Q8N108 512 aa13.31□□□□□ -0.28
LINC01004-202ENST00000450686 AIDAQ96BJ3 306 aa13.31□□□□□ -0.28
LINC01004-202ENST00000450686 TRMT112Q9UI30 125 aaKnown RBP13.31□□□□□ -0.28
LINC01004-202ENST00000450686 TRIM35Q9UPQ4 493 aa13.31□□□□□ -0.28
LINC01004-202ENST00000450686 WDR33Q9C0J8 1336 aaKnown RBP13.31□□□□□ -0.28
LINC01004-202ENST00000450686 ATP5J2-PTCD1G3V325 749 aa13.3□□□□□ -0.28
LINC01004-202ENST00000450686 SLC10A5Q5PT55 438 aa13.3□□□□□ -0.28
LINC01004-202ENST00000450686 CST9Q5W186 159 aa13.3□□□□□ -0.28
LINC01004-202ENST00000450686 DPP8Q6V1X1 898 aaPredicted RBP13.3□□□□□ -0.28
LINC01004-202ENST00000450686 GPR101Q96P66 508 aaPredicted RBP13.3□□□□□ -0.28
LINC01004-202ENST00000450686 PNNQ9H307 717 aaKnown RBP13.3□□□□□ -0.28
LINC01004-202ENST00000450686 WBP1LQ9NX94 342 aa13.3□□□□□ -0.28
LINC01004-202ENST00000450686 TSKSQ9UJT2 592 aa13.3□□□□□ -0.28
LINC01004-202ENST00000450686 AOC2O75106 756 aa13.29□□□□□ -0.28
LINC01004-202ENST00000450686 HSPA8P11142 646 aaKnown RBP13.29□□□□□ -0.28
LINC01004-202ENST00000450686 CTCFP49711 727 aaPredicted RBP13.29□□□□□ -0.28
LINC01004-202ENST00000450686 TCIRG1Q13488 830 aa13.29□□□□□ -0.28
LINC01004-202ENST00000450686 TRPM4Q8TD43 1214 aa13.29□□□□□ -0.28
LINC01004-202ENST00000450686 GLIS2Q9BZE0 524 aaPredicted RBP13.29□□□□□ -0.28
LINC01004-202ENST00000450686 GPRC5DQ9NZD1 345 aa13.29□□□□□ -0.28
LINC01004-202ENST00000450686 FARP1Q9Y4F1 1045 aaPredicted RBP13.29□□□□□ -0.28
LINC01004-202ENST00000450686 LRRC37AA6NMS7 1700 aa13.28□□□□□ -0.28
LINC01004-202ENST00000450686 YDJCA8MPS7 323 aa13.28□□□□□ -0.28
LINC01004-202ENST00000450686 RALBP1Q15311 655 aa13.28□□□□□ -0.28
LINC01004-202ENST00000450686 HDGFL1Q5TGJ6 251 aa13.28□□□□□ -0.28
LINC01004-202ENST00000450686 PLCD3Q8N3E9 789 aa13.28□□□□□ -0.28
LINC01004-202ENST00000450686 MPNDQ8N594 471 aa13.28□□□□□ -0.28
LINC01004-202ENST00000450686 FAM89AQ96GI7 184 aa13.28□□□□□ -0.28
LINC01004-202ENST00000450686 CAPNS2Q96L46 248 aa13.28□□□□□ -0.28
LINC01004-202ENST00000450686 ZNRF3Q9ULT6 936 aa13.28□□□□□ -0.28
LINC01004-202ENST00000450686 THSD7BQ9C0I4 1608 aa13.28□□□□□ -0.28
LINC01004-202ENST00000450686 CHL1O00533 1208 aa13.27□□□□□ -0.29
LINC01004-202ENST00000450686 HIRAP54198 1017 aaPredicted RBP13.27□□□□□ -0.29
LINC01004-202ENST00000450686 LMOD3Q0VAK6 560 aa13.27□□□□□ -0.29
LINC01004-202ENST00000450686 GRAPQ13588 217 aa13.27□□□□□ -0.29
LINC01004-202ENST00000450686 USP50Q70EL3 339 aaPredicted RBP13.27□□□□□ -0.29
LINC01004-202ENST00000450686 DDX46Q7L014 1031 aaKnown RBP13.27□□□□□ -0.29
LINC01004-202ENST00000450686 GRAPLQ8TC17 118 aaPredicted RBP13.27□□□□□ -0.29
LINC01004-202ENST00000450686 CELF1Q92879 486 aaKnown RBP13.27□□□□□ -0.29
LINC01004-202ENST00000450686 RTFDC1Q9BY42 306 aaPredicted RBP13.27□□□□□ -0.29
LINC01004-202ENST00000450686 ZNF408Q9H9D4 720 aa13.27□□□□□ -0.29
LINC01004-202ENST00000450686 ADAMTS8Q9UP79 889 aa13.27□□□□□ -0.29
LINC01004-202ENST00000450686 SH3TC1Q8TE82 1336 aa13.27□□□□□ -0.29
LINC01004-202ENST00000450686 MYBBP1AQ9BQG0 1328 aaKnown RBP13.27□□□□□ -0.29
LINC01004-202ENST00000450686 RIMBP2O15034 1052 aa13.26□□□□□ -0.29
LINC01004-202ENST00000450686 KIAA2012Q0VF49 1180 aa13.26□□□□□ -0.29
LINC01004-202ENST00000450686 HSP90AB3PQ58FF7 597 aa13.26□□□□□ -0.29
LINC01004-202ENST00000450686 CIAPIN1Q6FI81 312 aa13.26□□□□□ -0.29
LINC01004-202ENST00000450686 SP8Q8IXZ3 490 aa13.26□□□□□ -0.29
LINC01004-202ENST00000450686 JARID2Q92833 1246 aaPredicted RBP13.26□□□□□ -0.29
LINC01004-202ENST00000450686 TMX4Q9H1E5 349 aaPredicted RBP13.26□□□□□ -0.29
LINC01004-202ENST00000450686 PRDM10Q9NQV6 1147 aa13.26□□□□□ -0.29
LINC01004-202ENST00000450686 KCNQ5Q9NR82 932 aa13.26□□□□□ -0.29
LINC01004-202ENST00000450686 ADARB2Q9NS39 739 aaKnown RBP13.26□□□□□ -0.29
LINC01004-202ENST00000450686 POLR2AP24928 1970 aaKnown RBP13.25□□□□□ -0.29
LINC01004-202ENST00000450686 BBOX1O75936 387 aa13.25□□□□□ -0.29
LINC01004-202ENST00000450686 CELF2O95319 508 aaKnown RBP13.25□□□□□ -0.29
LINC01004-202ENST00000450686 WDR43Q15061 677 aaKnown RBP eCLIP13.25□□□□□ -0.29
LINC01004-202ENST00000450686 GRIPAP1Q4V328 841 aa13.25□□□□□ -0.29
LINC01004-202ENST00000450686 RUNDC1Q96C34 613 aa13.25□□□□□ -0.29
LINC01004-202ENST00000450686 BCL2L13Q9BXK5 485 aa13.25□□□□□ -0.29
LINC01004-202ENST00000450686 DBNDD1Q9H9R9 158 aa13.25□□□□□ -0.29
LINC01004-202ENST00000450686 BABAM1Q9NWV8 329 aa13.25□□□□□ -0.29
LINC01004-202ENST00000450686 SCN9AQ15858 1988 aa13.25□□□□□ -0.29
LINC01004-202ENST00000450686 ELL2O00472 640 aaPredicted RBP13.24□□□□□ -0.29
LINC01004-202ENST00000450686 EGFRP00533 1210 aa13.24□□□□□ -0.29
LINC01004-202ENST00000450686 GPSM2P81274 684 aa13.24□□□□□ -0.29
LINC01004-202ENST00000450686 DOK7Q18PE1 504 aa13.24□□□□□ -0.29
LINC01004-202ENST00000450686 DUSP27Q5VZP5 1158 aa13.24□□□□□ -0.29
LINC01004-202ENST00000450686 SUPT20HQ8NEM7 779 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms