RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 POTEJP0CG39 1038 aa28.25■■■□□ 2.11
CPSF7-208ENST00000450000 TRIM28Q13263 835 aaKnown RBP28.25■■■□□ 2.11
CPSF7-208ENST00000450000 AOC3Q16853 763 aa28.25■■■□□ 2.11
CPSF7-208ENST00000450000 WWC1Q8IX03 1113 aa28.25■■■□□ 2.11
CPSF7-208ENST00000450000 ANKRD36CQ5JPF3 1778 aa28.24■■■□□ 2.11
CPSF7-208ENST00000450000 SNED1Q8TER0 1413 aa28.24■■■□□ 2.11
CPSF7-208ENST00000450000 SALL2Q9Y467 1007 aaPredicted RBP28.23■■■□□ 2.11
CPSF7-208ENST00000450000 SF3B3Q15393 1217 aaKnown RBP28.22■■■□□ 2.11
CPSF7-208ENST00000450000 ZBTB38Q8NAP3 1195 aaPredicted RBP28.22■■■□□ 2.11
CPSF7-208ENST00000450000 SLC51AQ86UW1 340 aa28.21■■■□□ 2.11
CPSF7-208ENST00000450000 TSPYL6Q8N831 410 aa28.21■■■□□ 2.11
CPSF7-208ENST00000450000 CCDC191Q8NCU4 936 aa28.21■■■□□ 2.11
CPSF7-208ENST00000450000 CWC25Q9NXE8 425 aaPredicted RBP28.21■■■□□ 2.11
CPSF7-208ENST00000450000 TWISTNBQ3B726 338 aaPredicted RBP28.2■■■□□ 2.1
CPSF7-208ENST00000450000 RTFDC1Q9BY42 306 aaPredicted RBP28.2■■■□□ 2.1
CPSF7-208ENST00000450000 ZNRF3Q9ULT6 936 aa28.2■■■□□ 2.1
CPSF7-208ENST00000450000 IL16Q14005 1332 aa28.19■■■□□ 2.1
CPSF7-208ENST00000450000 NEXNQ0ZGT2 675 aa28.19■■■□□ 2.1
CPSF7-208ENST00000450000 NCBP3Q53F19 620 aaKnown RBP28.19■■■□□ 2.1
CPSF7-208ENST00000450000 METTL22Q9BUU2 404 aaPredicted RBP28.19■■■□□ 2.1
CPSF7-208ENST00000450000 CREBZFQ9NS37 354 aa28.18■■■□□ 2.1
CPSF7-208ENST00000450000 NSFL1CQ9UNZ2 370 aaKnown RBP28.18■■■□□ 2.1
CPSF7-208ENST00000450000 MAP3K2Q9Y2U5 619 aa28.18■■■□□ 2.1
CPSF7-208ENST00000450000 SCN4AP35499 1836 aa28.18■■■□□ 2.1
CPSF7-208ENST00000450000 KIAA2012Q0VF49 1180 aa28.16■■■□□ 2.1
CPSF7-208ENST00000450000 CCDC152Q4G0S7 254 aa28.16■■■□□ 2.1
CPSF7-208ENST00000450000 KSR2Q6VAB6 950 aa28.16■■■□□ 2.1
CPSF7-208ENST00000450000 CELF1Q92879 486 aaKnown RBP28.16■■■□□ 2.1
CPSF7-208ENST00000450000 C6orf229H3BNL8 230 aa28.15■■■□□ 2.1
CPSF7-208ENST00000450000 PCCAP05165 728 aaPredicted RBP28.15■■■□□ 2.1
CPSF7-208ENST00000450000 FAM9BQ8IZU0 186 aa28.15■■■□□ 2.1
CPSF7-208ENST00000450000 JMYQ8N9B5 988 aa28.15■■■□□ 2.1
CPSF7-208ENST00000450000 BCL2L13Q9BXK5 485 aa28.15■■■□□ 2.1
CPSF7-208ENST00000450000 PI4KAP2A4QPH2 592 aa28.14■■■□□ 2.1
CPSF7-208ENST00000450000 SLC4A2P04920 1241 aa28.14■■■□□ 2.1
CPSF7-208ENST00000450000 RPS8P62241 208 aaKnown RBP28.14■■■□□ 2.1
CPSF7-208ENST00000450000 TNIP1Q15025 636 aa28.14■■■□□ 2.1
CPSF7-208ENST00000450000 WASHC4Q2M389 1173 aa28.14■■■□□ 2.1
CPSF7-208ENST00000450000 CIAPIN1Q6FI81 312 aa28.14■■■□□ 2.1
CPSF7-208ENST00000450000 WDR63Q8IWG1 891 aa28.14■■■□□ 2.1
CPSF7-208ENST00000450000 CNTROBQ8N137 903 aa28.14■■■□□ 2.1
CPSF7-208ENST00000450000 PI4KAP1Q8N8J0 262 aa28.14■■■□□ 2.1
CPSF7-208ENST00000450000 PDE8AO60658 829 aa28.13■■■□□ 2.09
CPSF7-208ENST00000450000 MAP1SQ66K74 1059 aaPredicted RBP28.13■■■□□ 2.09
CPSF7-208ENST00000450000 EYA3Q99504 573 aa28.13■■■□□ 2.09
CPSF7-208ENST00000450000 EPS15P42566 896 aa28.12■■■□□ 2.09
CPSF7-208ENST00000450000 CXCL9Q07325 125 aa28.12■■■□□ 2.09
CPSF7-208ENST00000450000 JARID2Q92833 1246 aaPredicted RBP28.12■■■□□ 2.09
CPSF7-208ENST00000450000 TMEM88BA6NKF7 163 aa28.11■■■□□ 2.09
CPSF7-208ENST00000450000 G3V3G9 751 aa28.11■■■□□ 2.09
CPSF7-208ENST00000450000 SCNN1DP51172 638 aa28.11■■■□□ 2.09
CPSF7-208ENST00000450000 DCAF8Q5TAQ9 597 aa28.11■■■□□ 2.09
CPSF7-208ENST00000450000 USP50Q70EL3 339 aaPredicted RBP28.11■■■□□ 2.09
CPSF7-208ENST00000450000 MKRN1Q9UHC7 482 aaKnown RBP28.11■■■□□ 2.09
CPSF7-208ENST00000450000 COL4A5P29400 1685 aa28.1■■■□□ 2.09
CPSF7-208ENST00000450000 RIMBP2O15034 1052 aa28.1■■■□□ 2.09
CPSF7-208ENST00000450000 RAD17O75943 681 aa28.1■■■□□ 2.09
CPSF7-208ENST00000450000 CCDC85AQ96PX6 553 aaPredicted RBP28.1■■■□□ 2.09
CPSF7-208ENST00000450000 LAMB2P55268 1798 aa28.09■■■□□ 2.09
CPSF7-208ENST00000450000 ADARB2Q9NS39 739 aaKnown RBP28.09■■■□□ 2.09
CPSF7-208ENST00000450000 ANKIB1Q9P2G1 1089 aa28.09■■■□□ 2.09
CPSF7-208ENST00000450000 PASKQ96RG2 1323 aa28.09■■■□□ 2.09
CPSF7-208ENST00000450000 FANCIQ9NVI1 1328 aa28.09■■■□□ 2.09
CPSF7-208ENST00000450000 ITGBL1O95965 494 aaPredicted RBP28.08■■■□□ 2.09
CPSF7-208ENST00000450000 GPSM2P81274 684 aa28.08■■■□□ 2.09
CPSF7-208ENST00000450000 SEC31BQ9NQW1 1179 aa28.08■■■□□ 2.09
CPSF7-208ENST00000450000 GPRC5DQ9NZD1 345 aa28.08■■■□□ 2.09
CPSF7-208ENST00000450000 GMPSP49915 693 aaPredicted RBP28.07■■■□□ 2.08
CPSF7-208ENST00000450000 FKBP5Q13451 457 aaPredicted RBP28.07■■■□□ 2.08
CPSF7-208ENST00000450000 ANKRD18AQ8IVF6 992 aa28.06■■■□□ 2.08
CPSF7-208ENST00000450000 ZC3H12CQ9C0D7 883 aaKnown RBP28.06■■■□□ 2.08
CPSF7-208ENST00000450000 MYH16Q9H6N6 1097 aa28.06■■■□□ 2.08
CPSF7-208ENST00000450000 FLIIQ13045 1269 aa28.05■■■□□ 2.08
CPSF7-208ENST00000450000 G2E3Q7L622 706 aa28.05■■■□□ 2.08
CPSF7-208ENST00000450000 DDX60Q8IY21 1712 aaKnown RBP28.05■■■□□ 2.08
CPSF7-208ENST00000450000 CDC5LQ99459 802 aaKnown RBP28.05■■■□□ 2.08
CPSF7-208ENST00000450000 CDHR2Q9BYE9 1310 aa28.05■■■□□ 2.08
CPSF7-208ENST00000450000 DBNDD1Q9H9R9 158 aa28.05■■■□□ 2.08
CPSF7-208ENST00000450000 H7C1D1 291 aa28.04■■■□□ 2.08
CPSF7-208ENST00000450000 EXOSC9Q06265 439 aaKnown RBP28.04■■■□□ 2.08
CPSF7-208ENST00000450000 POLLQ9UGP5 575 aa28.04■■■□□ 2.08
CPSF7-208ENST00000450000 GGA1Q9UJY5 639 aa28.04■■■□□ 2.08
CPSF7-208ENST00000450000 UFL1O94874 794 aa28.03■■■□□ 2.08
CPSF7-208ENST00000450000 IGKV5-2P06315 115 aa28.03■■■□□ 2.08
CPSF7-208ENST00000450000 CWF19L2Q2TBE0 894 aaKnown RBP28.03■■■□□ 2.08
CPSF7-208ENST00000450000 IFFO2Q5TF58 517 aa28.03■■■□□ 2.08
CPSF7-208ENST00000450000 TBC1D16Q8TBP0 767 aa28.03■■■□□ 2.08
CPSF7-208ENST00000450000 ABT1Q9ULW3 272 aaKnown RBP28.03■■■□□ 2.08
CPSF7-208ENST00000450000 NEURL1BA8MQ27 555 aa28.02■■■□□ 2.08
CPSF7-208ENST00000450000 CTSWP56202 376 aa28.02■■■□□ 2.08
CPSF7-208ENST00000450000 DOK7Q18PE1 504 aa28.01■■■□□ 2.07
CPSF7-208ENST00000450000 DNAAF4Q8WXU2 420 aa28.01■■■□□ 2.07
CPSF7-208ENST00000450000 YDJCA8MPS7 323 aa28■■■□□ 2.07
CPSF7-208ENST00000450000 ECE2O60344 883 aa28■■■□□ 2.07
CPSF7-208ENST00000450000 VAMP4O75379 141 aa28■■■□□ 2.07
CPSF7-208ENST00000450000 HSPA1AP0DMV8 641 aaKnown RBP28■■■□□ 2.07
CPSF7-208ENST00000450000 HSPA1BP0DMV9 641 aaKnown RBP28■■■□□ 2.07
CPSF7-208ENST00000450000 PODXL2Q9NZ53 605 aa28■■■□□ 2.07
CPSF7-208ENST00000450000 CNOT7Q9UIV1 285 aaKnown RBP28■■■□□ 2.07
CPSF7-208ENST00000450000 CNTNAP1P78357 1384 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms