RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 RTFDC1Q9BY42 306 aaPredicted RBP22.33■■□□□ 1.17
CLTCL1-203ENST00000449918 RTL5Q5HYW3 569 aaPredicted RBP22.32■■□□□ 1.16
CLTCL1-203ENST00000449918 WDR63Q8IWG1 891 aa22.32■■□□□ 1.16
CLTCL1-203ENST00000449918 METTL22Q9BUU2 404 aaPredicted RBP22.32■■□□□ 1.16
CLTCL1-203ENST00000449918 HTRA3P83110 453 aa22.31■■□□□ 1.16
CLTCL1-203ENST00000449918 SLC51AQ86UW1 340 aa22.31■■□□□ 1.16
CLTCL1-203ENST00000449918 LDHDQ86WU2 507 aa22.31■■□□□ 1.16
CLTCL1-203ENST00000449918 SALL2Q9Y467 1007 aaPredicted RBP22.31■■□□□ 1.16
CLTCL1-203ENST00000449918 EPHX2P34913 555 aa22.3■■□□□ 1.16
CLTCL1-203ENST00000449918 AOC3Q16853 763 aa22.3■■□□□ 1.16
CLTCL1-203ENST00000449918 KSR2Q6VAB6 950 aa22.3■■□□□ 1.16
CLTCL1-203ENST00000449918 PNMA8AQ86V59 439 aaPredicted RBP22.3■■□□□ 1.16
CLTCL1-203ENST00000449918 CWC25Q9NXE8 425 aaPredicted RBP22.3■■□□□ 1.16
CLTCL1-203ENST00000449918 GJA3Q9Y6H8 435 aa22.3■■□□□ 1.16
CLTCL1-203ENST00000449918 EAPPQ56P03 285 aaPredicted RBP22.29■■□□□ 1.16
CLTCL1-203ENST00000449918 KLRG1Q96E93 195 aa22.29■■□□□ 1.16
CLTCL1-203ENST00000449918 MAP3K2Q9Y2U5 619 aa22.29■■□□□ 1.16
CLTCL1-203ENST00000449918 SLC4A2P04920 1241 aa22.28■■□□□ 1.16
CLTCL1-203ENST00000449918 PCCAP05165 728 aaPredicted RBP22.28■■□□□ 1.16
CLTCL1-203ENST00000449918 POTEIP0CG38 1075 aa22.28■■□□□ 1.16
CLTCL1-203ENST00000449918 POTEJP0CG39 1038 aa22.28■■□□□ 1.16
CLTCL1-203ENST00000449918 LMOD1P29536 600 aaPredicted RBP22.28■■□□□ 1.16
CLTCL1-203ENST00000449918 FAM9BQ8IZU0 186 aa22.28■■□□□ 1.16
CLTCL1-203ENST00000449918 PI4KAP2A4QPH2 592 aa22.27■■□□□ 1.16
CLTCL1-203ENST00000449918 NEXNQ0ZGT2 675 aa22.27■■□□□ 1.16
CLTCL1-203ENST00000449918 PI4KAP1Q8N8J0 262 aa22.27■■□□□ 1.16
CLTCL1-203ENST00000449918 ZNRF3Q9ULT6 936 aa22.27■■□□□ 1.16
CLTCL1-203ENST00000449918 CLEC11AQ9Y240 323 aa22.27■■□□□ 1.16
CLTCL1-203ENST00000449918 FANCIQ9NVI1 1328 aa22.27■■□□□ 1.16
CLTCL1-203ENST00000449918 SCN4AP35499 1836 aa22.27■■□□□ 1.15
CLTCL1-203ENST00000449918 KIAA2012Q0VF49 1180 aa22.26■■□□□ 1.15
CLTCL1-203ENST00000449918 CELF1Q92879 486 aaKnown RBP22.26■■□□□ 1.15
CLTCL1-203ENST00000449918 LAMB2P55268 1798 aa22.25■■□□□ 1.15
CLTCL1-203ENST00000449918 PDE8AO60658 829 aa22.25■■□□□ 1.15
CLTCL1-203ENST00000449918 RPS8P62241 208 aaKnown RBP22.25■■□□□ 1.15
CLTCL1-203ENST00000449918 CCDC152Q4G0S7 254 aa22.25■■□□□ 1.15
CLTCL1-203ENST00000449918 COL4A5P29400 1685 aa22.25■■□□□ 1.15
CLTCL1-203ENST00000449918 NSFL1CQ9UNZ2 370 aaKnown RBP22.24■■□□□ 1.15
CLTCL1-203ENST00000449918 DDX60Q8IY21 1712 aaKnown RBP22.23■■□□□ 1.15
CLTCL1-203ENST00000449918 CXCL9Q07325 125 aa22.22■■□□□ 1.15
CLTCL1-203ENST00000449918 G2E3Q7L622 706 aa22.22■■□□□ 1.15
CLTCL1-203ENST00000449918 JMYQ8N9B5 988 aa22.22■■□□□ 1.15
CLTCL1-203ENST00000449918 JARID2Q92833 1246 aaPredicted RBP22.22■■□□□ 1.15
CLTCL1-203ENST00000449918 MYH16Q9H6N6 1097 aa22.22■■□□□ 1.15
CLTCL1-203ENST00000449918 CREBZFQ9NS37 354 aa22.22■■□□□ 1.15
CLTCL1-203ENST00000449918 VAMP4O75379 141 aa22.21■■□□□ 1.15
CLTCL1-203ENST00000449918 IGKV5-2P06315 115 aa22.21■■□□□ 1.15
CLTCL1-203ENST00000449918 SCNN1DP51172 638 aa22.21■■□□□ 1.15
CLTCL1-203ENST00000449918 EXOSC9Q06265 439 aaKnown RBP22.21■■□□□ 1.15
CLTCL1-203ENST00000449918 FLIIQ13045 1269 aa22.21■■□□□ 1.15
CLTCL1-203ENST00000449918 TNIP1Q15025 636 aa22.21■■□□□ 1.15
CLTCL1-203ENST00000449918 WASHC4Q2M389 1173 aa22.21■■□□□ 1.15
CLTCL1-203ENST00000449918 CDHR2Q9BYE9 1310 aa22.21■■□□□ 1.15
CLTCL1-203ENST00000449918 C6orf229H3BNL8 230 aa22.2■■□□□ 1.14
CLTCL1-203ENST00000449918 EPS15P42566 896 aa22.2■■□□□ 1.14
CLTCL1-203ENST00000449918 GPSM2P81274 684 aa22.2■■□□□ 1.14
CLTCL1-203ENST00000449918 CIAPIN1Q6FI81 312 aa22.2■■□□□ 1.14
CLTCL1-203ENST00000449918 EYA3Q99504 573 aa22.2■■□□□ 1.14
CLTCL1-203ENST00000449918 SEC31BQ9NQW1 1179 aa22.2■■□□□ 1.14
CLTCL1-203ENST00000449918 NEURL1BA8MQ27 555 aa22.19■■□□□ 1.14
CLTCL1-203ENST00000449918 ITGBL1O95965 494 aaPredicted RBP22.19■■□□□ 1.14
CLTCL1-203ENST00000449918 FKBP5Q13451 457 aaPredicted RBP22.19■■□□□ 1.14
CLTCL1-203ENST00000449918 USP50Q70EL3 339 aaPredicted RBP22.19■■□□□ 1.14
CLTCL1-203ENST00000449918 CNTROBQ8N137 903 aa22.19■■□□□ 1.14
CLTCL1-203ENST00000449918 PASKQ96RG2 1323 aa22.19■■□□□ 1.14
CLTCL1-203ENST00000449918 CWF19L2Q2TBE0 894 aaKnown RBP22.18■■□□□ 1.14
CLTCL1-203ENST00000449918 GPRC5DQ9NZD1 345 aa22.18■■□□□ 1.14
CLTCL1-203ENST00000449918 POLLQ9UGP5 575 aa22.18■■□□□ 1.14
CLTCL1-203ENST00000449918 RAD17O75943 681 aa22.17■■□□□ 1.14
CLTCL1-203ENST00000449918 CTSWP56202 376 aa22.17■■□□□ 1.14
CLTCL1-203ENST00000449918 MAP1SQ66K74 1059 aaPredicted RBP22.17■■□□□ 1.14
CLTCL1-203ENST00000449918 ANKRD18AQ8IVF6 992 aa22.17■■□□□ 1.14
CLTCL1-203ENST00000449918 CCDC85AQ96PX6 553 aaPredicted RBP22.17■■□□□ 1.14
CLTCL1-203ENST00000449918 BCL2L13Q9BXK5 485 aa22.17■■□□□ 1.14
CLTCL1-203ENST00000449918 ADARB2Q9NS39 739 aaKnown RBP22.17■■□□□ 1.14
CLTCL1-203ENST00000449918 ANKIB1Q9P2G1 1089 aa22.17■■□□□ 1.14
CLTCL1-203ENST00000449918 TAF1P21675 1872 aa22.17■■□□□ 1.14
CLTCL1-203ENST00000449918 RIMBP2O15034 1052 aa22.16■■□□□ 1.14
CLTCL1-203ENST00000449918 GMPSP49915 693 aaPredicted RBP22.16■■□□□ 1.14
CLTCL1-203ENST00000449918 TBC1D16Q8TBP0 767 aa22.16■■□□□ 1.14
CLTCL1-203ENST00000449918 DNAAF4Q8WXU2 420 aa22.16■■□□□ 1.14
CLTCL1-203ENST00000449918 CDC5LQ99459 802 aaKnown RBP22.16■■□□□ 1.14
CLTCL1-203ENST00000449918 SPINK5Q9NQ38 1064 aaPredicted RBP22.16■■□□□ 1.14
CLTCL1-203ENST00000449918 PODXL2Q9NZ53 605 aa22.16■■□□□ 1.14
CLTCL1-203ENST00000449918 TMEM88BA6NKF7 163 aa22.15■■□□□ 1.14
CLTCL1-203ENST00000449918 H7C1W4 665 aa22.15■■□□□ 1.14
CLTCL1-203ENST00000449918 ZC3H12CQ9C0D7 883 aaKnown RBP22.15■■□□□ 1.14
CLTCL1-203ENST00000449918 LRRC37AA6NMS7 1700 aa22.14■■□□□ 1.14
CLTCL1-203ENST00000449918 YDJCA8MPS7 323 aa22.14■■□□□ 1.13
CLTCL1-203ENST00000449918 GCKRQ14397 625 aa22.14■■□□□ 1.13
CLTCL1-203ENST00000449918 UBE3BQ7Z3V4 1068 aa22.14■■□□□ 1.13
CLTCL1-203ENST00000449918 LINS1Q8NG48 757 aa22.14■■□□□ 1.13
CLTCL1-203ENST00000449918 TTLL11Q8NHH1 800 aa22.14■■□□□ 1.13
CLTCL1-203ENST00000449918 GGA1Q9UJY5 639 aa22.14■■□□□ 1.13
CLTCL1-203ENST00000449918 DUOX1Q9NRD9 1551 aa22.13■■□□□ 1.13
CLTCL1-203ENST00000449918 G3V3G9 751 aa22.13■■□□□ 1.13
CLTCL1-203ENST00000449918 DCAF8Q5TAQ9 597 aa22.13■■□□□ 1.13
CLTCL1-203ENST00000449918 DBNDD1Q9H9R9 158 aa22.13■■□□□ 1.13
CLTCL1-203ENST00000449918 UFL1O94874 794 aa22.12■■□□□ 1.13
CLTCL1-203ENST00000449918 ADAMTSL1Q8N6G6 1762 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms