RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 IFFO2Q5TF58 517 aa13.96□□□□□ -0.17
SRRT-205ENST00000449389 CCDC30Q5VVM6 783 aa13.96□□□□□ -0.17
SRRT-205ENST00000449389 ZNF428Q96B54 188 aa13.96□□□□□ -0.17
SRRT-205ENST00000449389 PHAXQ9H814 394 aaKnown RBP13.96□□□□□ -0.17
SRRT-205ENST00000449389 CLEC11AQ9Y240 323 aa13.96□□□□□ -0.17
SRRT-205ENST00000449389 IRS4O14654 1257 aaPredicted RBP13.95□□□□□ -0.18
SRRT-205ENST00000449389 DDX58O95786 925 aaKnown RBP13.95□□□□□ -0.18
SRRT-205ENST00000449389 HSP90B1P14625 803 aaKnown RBP13.95□□□□□ -0.18
SRRT-205ENST00000449389 ZNRF3Q9ULT6 936 aa13.95□□□□□ -0.18
SRRT-205ENST00000449389 ADAMTSL1Q8N6G6 1762 aa13.94□□□□□ -0.18
SRRT-205ENST00000449389 ZNF316A6NFI3 1004 aaPredicted RBP13.94□□□□□ -0.18
SRRT-205ENST00000449389 ANP32CO43423 234 aa13.94□□□□□ -0.18
SRRT-205ENST00000449389 ITGBL1O95965 494 aaPredicted RBP13.94□□□□□ -0.18
SRRT-205ENST00000449389 SCNN1DP51172 638 aa13.94□□□□□ -0.18
SRRT-205ENST00000449389 KIAA2012Q0VF49 1180 aa13.94□□□□□ -0.18
SRRT-205ENST00000449389 NCBP3Q53F19 620 aaKnown RBP13.94□□□□□ -0.18
SRRT-205ENST00000449389 DDX60Q8IY21 1712 aaKnown RBP13.94□□□□□ -0.18
SRRT-205ENST00000449389 MYD88Q99836 296 aa13.94□□□□□ -0.18
SRRT-205ENST00000449389 MRS2Q9HD23 443 aa13.94□□□□□ -0.18
SRRT-205ENST00000449389 RTL5Q5HYW3 569 aaPredicted RBP13.93□□□□□ -0.18
SRRT-205ENST00000449389 WWC1Q8IX03 1113 aa13.93□□□□□ -0.18
SRRT-205ENST00000449389 ZBTB38Q8NAP3 1195 aaPredicted RBP13.93□□□□□ -0.18
SRRT-205ENST00000449389 CCDC191Q8NCU4 936 aa13.93□□□□□ -0.18
SRRT-205ENST00000449389 CELF1Q92879 486 aaKnown RBP13.93□□□□□ -0.18
SRRT-205ENST00000449389 IL16Q14005 1332 aa13.92□□□□□ -0.18
SRRT-205ENST00000449389 TMEM88BA6NKF7 163 aa13.92□□□□□ -0.18
SRRT-205ENST00000449389 EPS15P42566 896 aa13.92□□□□□ -0.18
SRRT-205ENST00000449389 CXCL9Q07325 125 aa13.92□□□□□ -0.18
SRRT-205ENST00000449389 MAP1SQ66K74 1059 aaPredicted RBP13.92□□□□□ -0.18
SRRT-205ENST00000449389 USP50Q70EL3 339 aaPredicted RBP13.92□□□□□ -0.18
SRRT-205ENST00000449389 CNTROBQ8N137 903 aa13.92□□□□□ -0.18
SRRT-205ENST00000449389 TSPYL6Q8N831 410 aa13.92□□□□□ -0.18
SRRT-205ENST00000449389 TSR2Q969E8 191 aaKnown RBP13.92□□□□□ -0.18
SRRT-205ENST00000449389 METTL22Q9BUU2 404 aaPredicted RBP13.92□□□□□ -0.18
SRRT-205ENST00000449389 STK31Q9BXU1 1019 aa13.92□□□□□ -0.18
SRRT-205ENST00000449389 CWC25Q9NXE8 425 aaPredicted RBP13.92□□□□□ -0.18
SRRT-205ENST00000449389 LRRC37AA6NMS7 1700 aa13.92□□□□□ -0.18
SRRT-205ENST00000449389 PCNTO95613 3336 aa13.91□□□□□ -0.18
SRRT-205ENST00000449389 LTBP1Q14766 1721 aa13.91□□□□□ -0.18
SRRT-205ENST00000449389 PCCAP05165 728 aaPredicted RBP13.91□□□□□ -0.18
SRRT-205ENST00000449389 TNIP1Q15025 636 aa13.91□□□□□ -0.18
SRRT-205ENST00000449389 CIAPIN1Q6FI81 312 aa13.91□□□□□ -0.18
SRRT-205ENST00000449389 GPRC5DQ9NZD1 345 aa13.91□□□□□ -0.18
SRRT-205ENST00000449389 MKRN1Q9UHC7 482 aaKnown RBP13.91□□□□□ -0.18
SRRT-205ENST00000449389 NSFL1CQ9UNZ2 370 aaKnown RBP13.91□□□□□ -0.18
SRRT-205ENST00000449389 CNTNAP1P78357 1384 aa13.91□□□□□ -0.18
SRRT-205ENST00000449389 DUOX1Q9NRD9 1551 aa13.91□□□□□ -0.18
SRRT-205ENST00000449389 CDHR2Q9BYE9 1310 aa13.9□□□□□ -0.18
SRRT-205ENST00000449389 RPS8P62241 208 aaKnown RBP13.9□□□□□ -0.18
SRRT-205ENST00000449389 TWISTNBQ3B726 338 aaPredicted RBP13.9□□□□□ -0.18
SRRT-205ENST00000449389 KSR2Q6VAB6 950 aa13.9□□□□□ -0.18
SRRT-205ENST00000449389 ADARB2Q9NS39 739 aaKnown RBP13.9□□□□□ -0.18
SRRT-205ENST00000449389 MAP3K2Q9Y2U5 619 aa13.9□□□□□ -0.18
SRRT-205ENST00000449389 PDE8AO60658 829 aa13.89□□□□□ -0.19
SRRT-205ENST00000449389 HSPA1AP0DMV8 641 aaKnown RBP13.89□□□□□ -0.19
SRRT-205ENST00000449389 HSPA1BP0DMV9 641 aaKnown RBP13.89□□□□□ -0.19
SRRT-205ENST00000449389 GMPSP49915 693 aaPredicted RBP13.89□□□□□ -0.19
SRRT-205ENST00000449389 WASHC4Q2M389 1173 aa13.89□□□□□ -0.19
SRRT-205ENST00000449389 CCDC152Q4G0S7 254 aa13.89□□□□□ -0.19
SRRT-205ENST00000449389 TAF1P21675 1872 aa13.89□□□□□ -0.19
SRRT-205ENST00000449389 PI4KAP2A4QPH2 592 aa13.88□□□□□ -0.19
SRRT-205ENST00000449389 C6orf229H3BNL8 230 aa13.88□□□□□ -0.19
SRRT-205ENST00000449389 RAD17O75943 681 aa13.88□□□□□ -0.19
SRRT-205ENST00000449389 GPSM2P81274 684 aa13.88□□□□□ -0.19
SRRT-205ENST00000449389 NEXNQ0ZGT2 675 aa13.88□□□□□ -0.19
SRRT-205ENST00000449389 PI4KAP1Q8N8J0 262 aa13.88□□□□□ -0.19
SRRT-205ENST00000449389 EYA3Q99504 573 aa13.88□□□□□ -0.19
SRRT-205ENST00000449389 BCL2L13Q9BXK5 485 aa13.88□□□□□ -0.19
SRRT-205ENST00000449389 YDJCA8MPS7 323 aa13.87□□□□□ -0.19
SRRT-205ENST00000449389 WDR63Q8IWG1 891 aa13.87□□□□□ -0.19
SRRT-205ENST00000449389 SEC31BQ9NQW1 1179 aa13.87□□□□□ -0.19
SRRT-205ENST00000449389 PODXL2Q9NZ53 605 aa13.87□□□□□ -0.19
SRRT-205ENST00000449389 POLLQ9UGP5 575 aa13.87□□□□□ -0.19
SRRT-205ENST00000449389 COL4A1P02462 1669 aa13.87□□□□□ -0.19
SRRT-205ENST00000449389 FANCIQ9NVI1 1328 aa13.87□□□□□ -0.19
SRRT-205ENST00000449389 RASSF10A6NK89 507 aa13.86□□□□□ -0.19
SRRT-205ENST00000449389 RIMBP2O15034 1052 aa13.86□□□□□ -0.19
SRRT-205ENST00000449389 SLC4A2P04920 1241 aa13.86□□□□□ -0.19
SRRT-205ENST00000449389 IGKV5-2P06315 115 aa13.86□□□□□ -0.19
SRRT-205ENST00000449389 TBC1D16Q8TBP0 767 aa13.86□□□□□ -0.19
SRRT-205ENST00000449389 JARID2Q92833 1246 aaPredicted RBP13.86□□□□□ -0.19
SRRT-205ENST00000449389 VEGFBP49765 207 aa13.85□□□□□ -0.19
SRRT-205ENST00000449389 COL13A1Q5TAT6 717 aaPredicted RBP13.85□□□□□ -0.19
SRRT-205ENST00000449389 ANKRD18AQ8IVF6 992 aa13.85□□□□□ -0.19
SRRT-205ENST00000449389 DPF2Q92785 391 aa13.85□□□□□ -0.19
SRRT-205ENST00000449389 DBNDD1Q9H9R9 158 aa13.85□□□□□ -0.19
SRRT-205ENST00000449389 ANKIB1Q9P2G1 1089 aa13.85□□□□□ -0.19
SRRT-205ENST00000449389 NEURL1BA8MQ27 555 aa13.84□□□□□ -0.19
SRRT-205ENST00000449389 H7C1D1 291 aa13.84□□□□□ -0.19
SRRT-205ENST00000449389 PSMD14O00487 310 aa13.84□□□□□ -0.19
SRRT-205ENST00000449389 ECE2O60344 883 aa13.84□□□□□ -0.19
SRRT-205ENST00000449389 UFL1O94874 794 aa13.84□□□□□ -0.19
SRRT-205ENST00000449389 CTSWP56202 376 aa13.84□□□□□ -0.19
SRRT-205ENST00000449389 FLIIQ13045 1269 aa13.84□□□□□ -0.19
SRRT-205ENST00000449389 DEFB115Q30KQ5 88 aa13.84□□□□□ -0.19
SRRT-205ENST00000449389 G2E3Q7L622 706 aa13.84□□□□□ -0.19
SRRT-205ENST00000449389 ZC3H15Q8WU90 426 aaKnown RBP13.84□□□□□ -0.19
SRRT-205ENST00000449389 CCDC85AQ96PX6 553 aaPredicted RBP13.84□□□□□ -0.19
SRRT-205ENST00000449389 CDC5LQ99459 802 aaKnown RBP13.84□□□□□ -0.19
SRRT-205ENST00000449389 ZC3H12CQ9C0D7 883 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms