RNA–Protein interactions for RNA: ENST00000449191.1

UBE2F-SCLY-201, Transcript of UBE2F-SCLY readthrough (NMD candidate), humanhuman

APPRIS P5 TSL 3 BASIC

Gene UBE2F-SCLY, Length 951 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-SCLY-201ENST00000449191 ELL2O00472 640 aaPredicted RBP12.9□□□□□ -0.34
UBE2F-SCLY-201ENST00000449191 SCNN1DP51172 638 aa12.9□□□□□ -0.34
UBE2F-SCLY-201ENST00000449191 TRIM28Q13263 835 aaKnown RBP12.9□□□□□ -0.34
UBE2F-SCLY-201ENST00000449191 RIC3Q7Z5B4 369 aa12.9□□□□□ -0.34
UBE2F-SCLY-201ENST00000449191 MPNDQ8N594 471 aa12.9□□□□□ -0.34
UBE2F-SCLY-201ENST00000449191 C8orf58Q8NAV2 365 aa12.9□□□□□ -0.34
UBE2F-SCLY-201ENST00000449191 FAM89AQ96GI7 184 aa12.9□□□□□ -0.34
UBE2F-SCLY-201ENST00000449191 CLEC11AQ9Y240 323 aa12.9□□□□□ -0.34
UBE2F-SCLY-201ENST00000449191 COL4A1P02462 1669 aa12.89□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 SF3B3Q15393 1217 aaKnown RBP12.89□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 CHMP4AQ9BY43 222 aa12.89□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 PHAXQ9H814 394 aaKnown RBP12.89□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 IRS4O14654 1257 aaPredicted RBP12.88□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 KIAA2012Q0VF49 1180 aa12.88□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 CCDC27Q2M243 656 aa12.88□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 CCDC30Q5VVM6 783 aa12.88□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 ZNRF3Q9ULT6 936 aa12.88□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 CNTNAP1P78357 1384 aa12.88□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 TMEM88BA6NKF7 163 aa12.87□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 HSPA1AP0DMV8 641 aaKnown RBP12.87□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 HSPA1BP0DMV9 641 aaKnown RBP12.87□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 EPS15P42566 896 aa12.87□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 RTL5Q5HYW3 569 aaPredicted RBP12.87□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 MAP1SQ66K74 1059 aaPredicted RBP12.87□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 CNTROBQ8N137 903 aa12.87□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 TSPYL6Q8N831 410 aa12.87□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 ZBTB38Q8NAP3 1195 aaPredicted RBP12.87□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 CELF1Q92879 486 aaKnown RBP12.87□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 MYD88Q99836 296 aa12.87□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 MKRN1Q9UHC7 482 aaKnown RBP12.87□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 DDX58O95786 925 aaKnown RBP12.86□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 HSP90B1P14625 803 aaKnown RBP12.86□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 CXCL9Q07325 125 aa12.86□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 USP50Q70EL3 339 aaPredicted RBP12.86□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 WWC1Q8IX03 1113 aa12.86□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 CCDC191Q8NCU4 936 aa12.86□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 TSR2Q969E8 191 aaKnown RBP12.86□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 MRS2Q9HD23 443 aa12.86□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 GPRC5DQ9NZD1 345 aa12.86□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 TRPM7Q96QT4 1865 aa12.86□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 CDHR2Q9BYE9 1310 aa12.86□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 PCCAP05165 728 aaPredicted RBP12.85□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 CIAPIN1Q6FI81 312 aa12.85□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 METTL22Q9BUU2 404 aaPredicted RBP12.85□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 ADARB2Q9NS39 739 aaKnown RBP12.85□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 CWC25Q9NXE8 425 aaPredicted RBP12.85□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 IL16Q14005 1332 aa12.85□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 MYH3P11055 1940 aa12.84□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 ZNF316A6NFI3 1004 aaPredicted RBP12.84□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 ANP32CO43423 234 aa12.84□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 GMPSP49915 693 aaPredicted RBP12.84□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 STK31Q9BXU1 1019 aa12.84□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 NSFL1CQ9UNZ2 370 aaKnown RBP12.84□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 MAP3K2Q9Y2U5 619 aa12.84□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 CACNA1FO60840 1977 aa12.83□□□□□ -0.35
UBE2F-SCLY-201ENST00000449191 YDJCA8MPS7 323 aa12.83□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 RAD17O75943 681 aa12.83□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 RPS8P62241 208 aaKnown RBP12.83□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 GPSM2P81274 684 aa12.83□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 TNIP1Q15025 636 aa12.83□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 TWISTNBQ3B726 338 aaPredicted RBP12.83□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 RASSF10A6NK89 507 aa12.82□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 PDE8AO60658 829 aa12.82□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 WASHC4Q2M389 1173 aa12.82□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 CCDC152Q4G0S7 254 aa12.82□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 COL13A1Q5TAT6 717 aaPredicted RBP12.82□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 KSR2Q6VAB6 950 aa12.82□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 BCL2L13Q9BXK5 485 aa12.82□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 SEC31BQ9NQW1 1179 aa12.82□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 POLLQ9UGP5 575 aa12.82□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 THSD7BQ9C0I4 1608 aa12.81□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 PI4KAP2A4QPH2 592 aa12.81□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 C6orf229H3BNL8 230 aa12.81□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 VEGFBP49765 207 aa12.81□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 NEXNQ0ZGT2 675 aa12.81□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 PI4KAP1Q8N8J0 262 aa12.81□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 TBC1D16Q8TBP0 767 aa12.81□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 JARID2Q92833 1246 aaPredicted RBP12.81□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 EYA3Q99504 573 aa12.81□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 DBNDD1Q9H9R9 158 aa12.81□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 PODXL2Q9NZ53 605 aa12.81□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 FANCIQ9NVI1 1328 aa12.81□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 SPEF2Q9C093 1822 aa12.81□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 SCN9AQ15858 1988 aa12.8□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 RIMBP2O15034 1052 aa12.8□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 ECE2O60344 883 aa12.8□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 IGKV5-2P06315 115 aa12.8□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 CTSWP56202 376 aa12.8□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 ABT1Q9ULW3 272 aaKnown RBP12.8□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 PSME4Q14997 1843 aa12.8□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 NEURL1BA8MQ27 555 aa12.79□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 TRAF5O00463 557 aa12.79□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 PSMD14O00487 310 aa12.79□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 UFL1O94874 794 aa12.79□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 FMR1Q06787 632 aaKnown RBP eCLIP12.79□□□□□ -0.363e-6■■■■□ 23.7
UBE2F-SCLY-201ENST00000449191 DEFB115Q30KQ5 88 aa12.79□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 G2E3Q7L622 706 aa12.79□□□□□ -0.36
UBE2F-SCLY-201ENST00000449191 MICALL2Q8IY33 904 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms