RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 MASTLQ96GX5 879 aa13.45□□□□□ -0.26
SMPD4-211ENST00000449159 NLRP3Q96P20 1036 aa13.45□□□□□ -0.26
SMPD4-211ENST00000449159 PIM2Q9P1W9 311 aa13.45□□□□□ -0.26
SMPD4-211ENST00000449159 GRM8O00222 908 aa13.44□□□□□ -0.26
SMPD4-211ENST00000449159 PLIN1O60240 522 aa13.44□□□□□ -0.26
SMPD4-211ENST00000449159 NBPF7P0C2Y1 421 aaPredicted RBP13.44□□□□□ -0.26
SMPD4-211ENST00000449159 CCT4P50991 539 aaKnown RBP13.44□□□□□ -0.26
SMPD4-211ENST00000449159 STYK1Q6J9G0 422 aa13.44□□□□□ -0.26
SMPD4-211ENST00000449159 SLC51AQ86UW1 340 aa13.44□□□□□ -0.26
SMPD4-211ENST00000449159 RPGRQ92834 1020 aaKnown RBP13.44□□□□□ -0.26
SMPD4-211ENST00000449159 C9orf78Q9NZ63 289 aaPredicted RBP13.44□□□□□ -0.26
SMPD4-211ENST00000449159 PDZRN3Q9UPQ7 1066 aa13.44□□□□□ -0.26
SMPD4-211ENST00000449159 PDE8AO60658 829 aa13.43□□□□□ -0.26
SMPD4-211ENST00000449159 HOXA10P31260 410 aaPredicted RBP13.43□□□□□ -0.26
SMPD4-211ENST00000449159 DALRD3Q5D0E6 543 aaKnown RBP13.43□□□□□ -0.26
SMPD4-211ENST00000449159 INTS3Q68E01 1043 aaKnown RBP13.43□□□□□ -0.26
SMPD4-211ENST00000449159 TMEM57Q8N5G2 664 aa13.43□□□□□ -0.26
SMPD4-211ENST00000449159 CCDC85AQ96PX6 553 aaPredicted RBP13.43□□□□□ -0.26
SMPD4-211ENST00000449159 USP44Q9H0E7 712 aa13.43□□□□□ -0.26
SMPD4-211ENST00000449159 NMRK2Q9NPI5 230 aa13.43□□□□□ -0.26
SMPD4-211ENST00000449159 DICER1Q9UPY3 1922 aaKnown RBP13.43□□□□□ -0.26
SMPD4-211ENST00000449159 UTYO14607 1347 aa13.42□□□□□ -0.26
SMPD4-211ENST00000449159 CTSWP56202 376 aa13.42□□□□□ -0.26
SMPD4-211ENST00000449159 SF3B3Q15393 1217 aaKnown RBP13.42□□□□□ -0.26
SMPD4-211ENST00000449159 EPHA10Q5JZY3 1008 aa13.42□□□□□ -0.26
SMPD4-211ENST00000449159 PRPF40BQ6NWY9 871 aaKnown RBP13.42□□□□□ -0.26
SMPD4-211ENST00000449159 FTSJ3Q8IY81 847 aaKnown RBP13.42□□□□□ -0.26
SMPD4-211ENST00000449159 C16orf71Q8IYS4 520 aaPredicted RBP13.42□□□□□ -0.26
SMPD4-211ENST00000449159 TTLL6Q8N841 843 aa13.42□□□□□ -0.26
SMPD4-211ENST00000449159 PANK1Q8TE04 598 aa13.42□□□□□ -0.26
SMPD4-211ENST00000449159 KAZALD1Q96I82 304 aa13.42□□□□□ -0.26
SMPD4-211ENST00000449159 ZNF219Q9P2Y4 722 aaPredicted RBP13.42□□□□□ -0.26
SMPD4-211ENST00000449159 FER1L6Q2WGJ9 1857 aa13.42□□□□□ -0.26
SMPD4-211ENST00000449159 LRRC37AA6NMS7 1700 aa13.42□□□□□ -0.26
SMPD4-211ENST00000449159 KDM2BQ8NHM5 1336 aa13.41□□□□□ -0.26
SMPD4-211ENST00000449159 FOXO4P98177 505 aa13.41□□□□□ -0.26
SMPD4-211ENST00000449159 C9orf131Q5VYM1 1079 aa13.41□□□□□ -0.26
SMPD4-211ENST00000449159 OLFM4Q6UX06 510 aa13.41□□□□□ -0.26
SMPD4-211ENST00000449159 DZIP1LQ8IYY4 767 aaKnown RBP13.41□□□□□ -0.26
SMPD4-211ENST00000449159 RBM46Q8TBY0 533 aaKnown RBP13.41□□□□□ -0.26
SMPD4-211ENST00000449159 CNKSR1Q969H4 720 aa13.41□□□□□ -0.26
SMPD4-211ENST00000449159 RBM17Q96I25 401 aaKnown RBP13.41□□□□□ -0.26
SMPD4-211ENST00000449159 SUCLG2Q96I99 432 aa13.41□□□□□ -0.26
SMPD4-211ENST00000449159 MEIS3Q99687 375 aa13.41□□□□□ -0.26
SMPD4-211ENST00000449159 PLA2G12BQ9BX93 195 aa13.41□□□□□ -0.26
SMPD4-211ENST00000449159 SEC31BQ9NQW1 1179 aa13.41□□□□□ -0.26
SMPD4-211ENST00000449159 C20orf194Q5TEA3 1177 aa13.4□□□□□ -0.26
SMPD4-211ENST00000449159 TTLL11Q8NHH1 800 aa13.4□□□□□ -0.26
SMPD4-211ENST00000449159 CRAMP1Q96RY5 1269 aa13.4□□□□□ -0.26
SMPD4-211ENST00000449159 GREM2Q9H772 168 aa13.4□□□□□ -0.26
SMPD4-211ENST00000449159 RNF181Q9P0P0 153 aa13.4□□□□□ -0.26
SMPD4-211ENST00000449159 C21orf2O43822 256 aa13.39□□□□□ -0.27
SMPD4-211ENST00000449159 HSP90B1P14625 803 aaKnown RBP13.39□□□□□ -0.27
SMPD4-211ENST00000449159 FAM161AQ3B820 660 aa13.39□□□□□ -0.27
SMPD4-211ENST00000449159 CCDC152Q4G0S7 254 aa13.39□□□□□ -0.27
SMPD4-211ENST00000449159 DDX46Q7L014 1031 aaKnown RBP13.39□□□□□ -0.27
SMPD4-211ENST00000449159 ITPRIPQ8IWB1 547 aa13.39□□□□□ -0.27
SMPD4-211ENST00000449159 CELF1Q92879 486 aaKnown RBP13.39□□□□□ -0.27
SMPD4-211ENST00000449159 BICC1Q9H694 974 aaKnown RBP13.39□□□□□ -0.27
SMPD4-211ENST00000449159 A0A1B0GUL6 1792 aa13.39□□□□□ -0.27
SMPD4-211ENST00000449159 ZC3H4Q9UPT8 1303 aaKnown RBP13.39□□□□□ -0.27
SMPD4-211ENST00000449159 RTL9Q8NET4 1388 aa13.38□□□□□ -0.27
SMPD4-211ENST00000449159 PPEF1O14829 653 aaPredicted RBP13.38□□□□□ -0.27
SMPD4-211ENST00000449159 CSF1RP07333 972 aa13.38□□□□□ -0.27
SMPD4-211ENST00000449159 UBTFL1P0CB47 393 aaPredicted RBP13.38□□□□□ -0.27
SMPD4-211ENST00000449159 ALDH1B1P30837 517 aa13.38□□□□□ -0.27
SMPD4-211ENST00000449159 FSTL1Q12841 308 aa13.38□□□□□ -0.27
SMPD4-211ENST00000449159 GRAPQ13588 217 aa13.38□□□□□ -0.27
SMPD4-211ENST00000449159 ANKRD44Q8N8A2 993 aa13.38□□□□□ -0.27
SMPD4-211ENST00000449159 GRAPLQ8TC17 118 aaPredicted RBP13.38□□□□□ -0.27
SMPD4-211ENST00000449159 C7orf43Q8WVR3 580 aa13.38□□□□□ -0.27
SMPD4-211ENST00000449159 LTBP1Q14766 1721 aa13.38□□□□□ -0.27
SMPD4-211ENST00000449159 SNED1Q8TER0 1413 aa13.38□□□□□ -0.27
SMPD4-211ENST00000449159 RRP1P56182 461 aaKnown RBP13.37□□□□□ -0.27
SMPD4-211ENST00000449159 LMBR1LQ6UX01 489 aa13.37□□□□□ -0.27
SMPD4-211ENST00000449159 DNAJC5GQ8N7S2 189 aa13.37□□□□□ -0.27
SMPD4-211ENST00000449159 CHMP3Q9Y3E7 222 aa13.37□□□□□ -0.27
SMPD4-211ENST00000449159 ITGA6P23229 1130 aa13.36□□□□□ -0.27
SMPD4-211ENST00000449159 RABL6Q3YEC7 729 aaPredicted RBP13.36□□□□□ -0.27
SMPD4-211ENST00000449159 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.36□□□□□ -0.27
SMPD4-211ENST00000449159 COG6Q9Y2V7 657 aa13.36□□□□□ -0.27
SMPD4-211ENST00000449159 LRRFIP2Q9Y608 721 aaKnown RBP13.36□□□□□ -0.27
SMPD4-211ENST00000449159 DUOX1Q9NRD9 1551 aa13.36□□□□□ -0.27
SMPD4-211ENST00000449159 NFKBIEO00221 500 aa13.35□□□□□ -0.27
SMPD4-211ENST00000449159 BBOX1O75936 387 aa13.35□□□□□ -0.27
SMPD4-211ENST00000449159 RPS8P62241 208 aaKnown RBP13.35□□□□□ -0.27
SMPD4-211ENST00000449159 RASSF7Q02833 373 aa13.35□□□□□ -0.27
SMPD4-211ENST00000449159 MVPQ14764 893 aaKnown RBP13.35□□□□□ -0.27
SMPD4-211ENST00000449159 GNAI3P08754 354 aa13.34□□□□□ -0.27
SMPD4-211ENST00000449159 MS4A1P11836 297 aa13.34□□□□□ -0.27
SMPD4-211ENST00000449159 PDE3AQ14432 1141 aa13.34□□□□□ -0.27
SMPD4-211ENST00000449159 KLRG1Q96E93 195 aa13.34□□□□□ -0.27
SMPD4-211ENST00000449159 ZNF594Q96JF6 807 aaPredicted RBP13.34□□□□□ -0.27
SMPD4-211ENST00000449159 C1orf115Q9H7X2 142 aa13.34□□□□□ -0.27
SMPD4-211ENST00000449159 ATP6V0A2Q9Y487 856 aa13.34□□□□□ -0.27
SMPD4-211ENST00000449159 ANKRD18BA2A2Z9 1011 aa13.33□□□□□ -0.28
SMPD4-211ENST00000449159 ZBTB7BO15156 539 aaPredicted RBP13.33□□□□□ -0.28
SMPD4-211ENST00000449159 PRELPP51888 382 aa13.33□□□□□ -0.28
SMPD4-211ENST00000449159 IFIT5Q13325 482 aaKnown RBP13.33□□□□□ -0.28
SMPD4-211ENST00000449159 CCDC93Q567U6 631 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms