RNA–Protein interactions for RNA: ENST00000448885.5

PCDH15-219, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-219ENST00000448885 MCM10Q7L590 875 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 GSTA5Q7RTV2 222 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 CCDC63Q8NA47 563 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 MSANTD4Q8NCY6 345 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 RGS22Q8NE09 1264 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 CCDC8Q9H0W5 538 aaPredicted RBP7.04□□□□□ -1.28
PCDH15-219ENST00000448885 ADCY10Q96PN6 1610 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 CKAP2LQ8IYA6 745 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 ZGPATQ8N5A5 531 aaKnown RBP7.04□□□□□ -1.28
PCDH15-219ENST00000448885 ANKS4BQ8N8V4 417 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 PAIP2Q9BPZ3 127 aaKnown RBP7.04□□□□□ -1.28
PCDH15-219ENST00000448885 SLC26A6Q9BXS9 759 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 SERPINA10Q9UK55 444 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 USP16Q9Y5T5 823 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 MRVI1Q9Y6F6 885 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 SUPT6HQ7KZ85 1726 aaKnown RBP7.04□□□□□ -1.28
PCDH15-219ENST00000448885 STAT6P42226 847 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 AFAP1Q8N556 730 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 VAT1LQ9HCJ6 419 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 TSPY3P0CV98 308 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 TSPY8P0CW00 308 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 ZC3H6P61129 1189 aaKnown RBP7.04□□□□□ -1.28
PCDH15-219ENST00000448885 NCBP1Q09161 790 aaKnown RBP7.04□□□□□ -1.28
PCDH15-219ENST00000448885 NBPF1Q3BBV0 1214 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 CCDC14Q49A88 953 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 CWC25Q9NXE8 425 aaPredicted RBP7.04□□□□□ -1.28
PCDH15-219ENST00000448885 MIS18AQ9NYP9 233 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 DHX29Q7Z478 1369 aaKnown RBP7.04□□□□□ -1.28
PCDH15-219ENST00000448885 C6orf229H3BNL8 230 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 FAM13AO94988 1023 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 IVLP07476 585 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 ATP2A2P16615 1042 aaKnown RBP7.04□□□□□ -1.28
PCDH15-219ENST00000448885 UBA7P41226 1012 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 MAP3K9P80192 1104 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 GPATCH11Q8N954 259 aa7.04□□□□□ -1.28
PCDH15-219ENST00000448885 ZSCAN16Q9H4T2 348 aaPredicted RBP7.04□□□□□ -1.28
PCDH15-219ENST00000448885 B4DLN1 442 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 MRPL12P52815 198 aaKnown RBP7.03□□□□□ -1.28
PCDH15-219ENST00000448885 SNX16P57768 344 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 CCDC82Q8N4S0 544 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 C16orf45Q96MC5 204 aaPredicted RBP7.03□□□□□ -1.28
PCDH15-219ENST00000448885 CTAGE15A4D2H0 777 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 ADCY5O95622 1261 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 CTAGE8P0CG41 777 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 CTAGE6Q86UF2 777 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 CTAGE4Q8IX94 777 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 CCDC144CPQ8IYA2 1237 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 IMPG2Q9BZV3 1241 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 ZNF219Q9P2Y4 722 aaPredicted RBP7.03□□□□□ -1.28
PCDH15-219ENST00000448885 ALDH3A1P30838 453 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 PSMC4P43686 418 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 CFAP58Q5T655 872 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 LRSAM1Q6UWE0 723 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 GTPBP4Q9BZE4 634 aaKnown RBP7.03□□□□□ -1.28
PCDH15-219ENST00000448885 CNNM2Q9H8M5 875 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 NEK1Q96PY6 1258 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 PRDM10Q9NQV6 1147 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 NAIPQ13075 1403 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 RTL9Q8NET4 1388 aa7.03□□□□□ -1.28
PCDH15-219ENST00000448885 BIN1O00499 593 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 CCDC152Q4G0S7 254 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 CCDC50Q8IVM0 306 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 PLCD3Q8N3E9 789 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 TTC16Q8NEE8 873 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 USP25Q9UHP3 1055 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 MAP3K2Q9Y2U5 619 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 PIK3R4Q99570 1358 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 UGGT2Q9NYU1 1516 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 PTCD1O75127 700 aaKnown RBP7.02□□□□□ -1.29
PCDH15-219ENST00000448885 VTI1AQ96AJ9 217 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 DBF4Q9UBU7 674 aaPredicted RBP7.02□□□□□ -1.29
PCDH15-219ENST00000448885 CAMSAP2Q08AD1 1489 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 TMEM110-MUSTN1A8MSY1 372 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 N4BP3O15049 544 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 SH3BP5O60239 455 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 GAS8O95995 478 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 SSFA2P28290 1259 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 MKRN1Q9UHC7 482 aaKnown RBP7.02□□□□□ -1.29
PCDH15-219ENST00000448885 TACC1O75410 805 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 TUBB4AP04350 444 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 WTAPQ15007 396 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 MPRIPQ6WCQ1 1025 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 CCDC117Q8IWD4 279 aaPredicted RBP7.02□□□□□ -1.29
PCDH15-219ENST00000448885 SELENOSQ9BQE4 189 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 AKR1B10O60218 316 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 NBPF7P0C2Y1 421 aaPredicted RBP7.02□□□□□ -1.29
PCDH15-219ENST00000448885 EEF2P13639 858 aaKnown RBP7.02□□□□□ -1.29
PCDH15-219ENST00000448885 GNG11P61952 73 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 UBE2HP62256 183 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 SPAG1Q07617 926 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 KIF5AQ12840 1032 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 IFIT1BQ5T764 474 aaKnown RBP7.02□□□□□ -1.29
PCDH15-219ENST00000448885 SMARCC2Q8TAQ2 1214 aa7.02□□□□□ -1.29
PCDH15-219ENST00000448885 ATP2C2O75185 946 aa7.01□□□□□ -1.29
PCDH15-219ENST00000448885 ZNF622Q969S3 477 aaKnown RBP eCLIP7.01□□□□□ -1.29
PCDH15-219ENST00000448885 TSGA10Q9BZW7 698 aa7.01□□□□□ -1.29
PCDH15-219ENST00000448885 ORC3Q9UBD5 711 aaPredicted RBP7.01□□□□□ -1.29
PCDH15-219ENST00000448885 TTC21BQ7Z4L5 1316 aa7.01□□□□□ -1.29
PCDH15-219ENST00000448885 IFT140Q96RY7 1462 aa7.01□□□□□ -1.29
PCDH15-219ENST00000448885 CCDC160A6NGH7 325 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms