RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 PIP4K2BP78356 416 aa8.54□□□□□ -1.04
RFC4-209ENST00000448497 TRIM28Q13263 835 aaKnown RBP8.54□□□□□ -1.04
RFC4-209ENST00000448497 DDB1Q16531 1140 aa8.54□□□□□ -1.04
RFC4-209ENST00000448497 CERKQ8TCT0 537 aa8.54□□□□□ -1.04
RFC4-209ENST00000448497 KHSRPQ92945 711 aaKnown RBP eCLIP8.54□□□□□ -1.04
RFC4-209ENST00000448497 FBXW7Q969H0 707 aa8.54□□□□□ -1.04
RFC4-209ENST00000448497 TBC1D32Q96NH3 1257 aa8.54□□□□□ -1.04
RFC4-209ENST00000448497 UPF2Q9HAU5 1272 aaKnown RBP8.54□□□□□ -1.04
RFC4-209ENST00000448497 USP35Q9P2H5 1018 aa8.54□□□□□ -1.04
RFC4-209ENST00000448497 COL5A3P25940 1745 aaPredicted RBP8.54□□□□□ -1.04
RFC4-209ENST00000448497 GRXCR2A6NFK2 248 aa8.53□□□□□ -1.04
RFC4-209ENST00000448497 STARD3NLO95772 234 aa8.53□□□□□ -1.04
RFC4-209ENST00000448497 MLLT3P42568 568 aaPredicted RBP8.53□□□□□ -1.04
RFC4-209ENST00000448497 AIMP1Q12904 312 aaKnown RBP8.53□□□□□ -1.04
RFC4-209ENST00000448497 CWF19L2Q2TBE0 894 aaKnown RBP8.53□□□□□ -1.04
RFC4-209ENST00000448497 RABL6Q3YEC7 729 aaPredicted RBP8.53□□□□□ -1.04
RFC4-209ENST00000448497 DDX12PQ92771 950 aa8.53□□□□□ -1.04
RFC4-209ENST00000448497 KIF1BPQ96EK5 621 aa8.53□□□□□ -1.04
RFC4-209ENST00000448497 KAZALD1Q96I82 304 aa8.53□□□□□ -1.04
RFC4-209ENST00000448497 ASAP1Q9ULH1 1129 aa8.53□□□□□ -1.04
RFC4-209ENST00000448497 USP42Q9H9J4 1324 aaKnown RBP8.53□□□□□ -1.04
RFC4-209ENST00000448497 MYH3P11055 1940 aa8.52□□□□□ -1.04
RFC4-209ENST00000448497 SRGAP3O43295 1099 aa8.52□□□□□ -1.05
RFC4-209ENST00000448497 CDC45O75419 566 aa8.52□□□□□ -1.05
RFC4-209ENST00000448497 GSPT1P15170 499 aaKnown RBP8.52□□□□□ -1.05
RFC4-209ENST00000448497 FOSBP53539 338 aa8.52□□□□□ -1.05
RFC4-209ENST00000448497 PDE1AP54750 535 aa8.52□□□□□ -1.05
RFC4-209ENST00000448497 CASP7P55210 303 aa8.52□□□□□ -1.05
RFC4-209ENST00000448497 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.52□□□□□ -1.05
RFC4-209ENST00000448497 ERC1Q8IUD2 1116 aa8.52□□□□□ -1.05
RFC4-209ENST00000448497 CCDC191Q8NCU4 936 aa8.52□□□□□ -1.05
RFC4-209ENST00000448497 FAM163AQ96GL9 167 aaPredicted RBP8.52□□□□□ -1.05
RFC4-209ENST00000448497 LHX6Q9UPM6 363 aa8.52□□□□□ -1.05
RFC4-209ENST00000448497 EXOC6BQ9Y2D4 811 aa8.52□□□□□ -1.05
RFC4-209ENST00000448497 SBF2Q86WG5 1849 aa8.52□□□□□ -1.05
RFC4-209ENST00000448497 NHSQ6T4R5 1651 aa8.51□□□□□ -1.05
RFC4-209ENST00000448497 NUTM2BA6NNL0 878 aaPredicted RBP8.51□□□□□ -1.05
RFC4-209ENST00000448497 NUTM2EB1AL46 878 aaPredicted RBP8.51□□□□□ -1.05
RFC4-209ENST00000448497 H7C1W4 665 aa8.51□□□□□ -1.05
RFC4-209ENST00000448497 PTCD1O75127 700 aaKnown RBP8.51□□□□□ -1.05
RFC4-209ENST00000448497 SURF6O75683 361 aaKnown RBP8.51□□□□□ -1.05
RFC4-209ENST00000448497 A1BGP04217 495 aa8.51□□□□□ -1.05
RFC4-209ENST00000448497 CYP19A1P11511 503 aaPredicted RBP8.51□□□□□ -1.05
RFC4-209ENST00000448497 PRKCSHP14314 528 aaPredicted RBP8.51□□□□□ -1.05
RFC4-209ENST00000448497 RBM25P49756 843 aaKnown RBP8.51□□□□□ -1.05
RFC4-209ENST00000448497 PPP4R3BQ5MIZ7 849 aa8.51□□□□□ -1.05
RFC4-209ENST00000448497 TYW1BQ6NUM6 668 aa8.51□□□□□ -1.05
RFC4-209ENST00000448497 NUTM2AQ8IVF1 878 aaPredicted RBP8.51□□□□□ -1.05
RFC4-209ENST00000448497 MARCH10Q8NA82 808 aaPredicted RBP8.51□□□□□ -1.05
RFC4-209ENST00000448497 RHPN1Q8TCX5 695 aa8.51□□□□□ -1.05
RFC4-209ENST00000448497 SUCLG2Q96I99 432 aa8.51□□□□□ -1.05
RFC4-209ENST00000448497 MYD88Q99836 296 aa8.51□□□□□ -1.05
RFC4-209ENST00000448497 MYH14Q7Z406 1995 aaKnown RBP8.51□□□□□ -1.05
RFC4-209ENST00000448497 SMARCA5O60264 1052 aaPredicted RBP8.5□□□□□ -1.05
RFC4-209ENST00000448497 MX1P20591 662 aa8.5□□□□□ -1.05
RFC4-209ENST00000448497 OSBPP22059 807 aa8.5□□□□□ -1.05
RFC4-209ENST00000448497 IL6STP40189 918 aaPredicted RBP8.5□□□□□ -1.05
RFC4-209ENST00000448497 PRIM1P49642 420 aaKnown RBP8.5□□□□□ -1.05
RFC4-209ENST00000448497 EMP3P54852 163 aa8.5□□□□□ -1.05
RFC4-209ENST00000448497 TBC1D9Q6ZT07 1266 aa8.5□□□□□ -1.05
RFC4-209ENST00000448497 DNAJC10Q8IXB1 793 aa8.5□□□□□ -1.05
RFC4-209ENST00000448497 C16orf71Q8IYS4 520 aaPredicted RBP8.5□□□□□ -1.05
RFC4-209ENST00000448497 ZNF454Q8N9F8 522 aa8.5□□□□□ -1.05
RFC4-209ENST00000448497 SMARCC1Q92922 1105 aaPredicted RBP8.5□□□□□ -1.05
RFC4-209ENST00000448497 SLC4A9Q96Q91 983 aa8.5□□□□□ -1.05
RFC4-209ENST00000448497 ISCA1Q9BUE6 129 aa8.5□□□□□ -1.05
RFC4-209ENST00000448497 BICC1Q9H694 974 aaKnown RBP8.5□□□□□ -1.05
RFC4-209ENST00000448497 COPRSQ9NQ92 184 aa8.5□□□□□ -1.05
RFC4-209ENST00000448497 PCDHGA10Q9Y5H3 936 aa8.5□□□□□ -1.05
RFC4-209ENST00000448497 TTC41PQ6P2S7 1318 aa8.5□□□□□ -1.05
RFC4-209ENST00000448497 LY75O60449 1722 aa8.49□□□□□ -1.05
RFC4-209ENST00000448497 BCORQ6W2J9 1755 aa8.49□□□□□ -1.05
RFC4-209ENST00000448497 ERVV-1B6SEH8 477 aa8.49□□□□□ -1.05
RFC4-209ENST00000448497 EPB41L2O43491 1005 aaKnown RBP8.49□□□□□ -1.05
RFC4-209ENST00000448497 SDSP20132 328 aa8.49□□□□□ -1.05
RFC4-209ENST00000448497 TCIRG1Q13488 830 aa8.49□□□□□ -1.05
RFC4-209ENST00000448497 HSP90AB3PQ58FF7 597 aa8.49□□□□□ -1.05
RFC4-209ENST00000448497 TTLL7Q6ZT98 887 aa8.49□□□□□ -1.05
RFC4-209ENST00000448497 NPM2Q86SE8 214 aaKnown RBP8.49□□□□□ -1.05
RFC4-209ENST00000448497 OTUD7AQ8TE49 926 aaPredicted RBP8.49□□□□□ -1.05
RFC4-209ENST00000448497 ZDHHC16Q969W1 377 aa8.49□□□□□ -1.05
RFC4-209ENST00000448497 NGLY1Q96IV0 654 aa8.49□□□□□ -1.05
RFC4-209ENST00000448497 PLA2G12BQ9BX93 195 aa8.49□□□□□ -1.05
RFC4-209ENST00000448497 C22orf23Q9BZE7 217 aa8.49□□□□□ -1.05
RFC4-209ENST00000448497 CWC25Q9NXE8 425 aaPredicted RBP8.49□□□□□ -1.05
RFC4-209ENST00000448497 BTAF1O14981 1849 aa8.49□□□□□ -1.05
RFC4-209ENST00000448497 MAP3K15Q6ZN16 1313 aa8.49□□□□□ -1.05
RFC4-209ENST00000448497 LAMB2P55268 1798 aa8.48□□□□□ -1.05
RFC4-209ENST00000448497 ATRNO75882 1429 aa8.48□□□□□ -1.05
RFC4-209ENST00000448497 A0A087WZG4 1122 aa8.48□□□□□ -1.05
RFC4-209ENST00000448497 ONECUT3O60422 494 aaPredicted RBP8.48□□□□□ -1.05
RFC4-209ENST00000448497 RFX5P48382 616 aaPredicted RBP8.48□□□□□ -1.05
RFC4-209ENST00000448497 EN1Q05925 392 aaPredicted RBP8.48□□□□□ -1.05
RFC4-209ENST00000448497 CASC1Q6TDU7 716 aa8.48□□□□□ -1.05
RFC4-209ENST00000448497 GIGYF2Q6Y7W6 1299 aaKnown RBP8.48□□□□□ -1.05
RFC4-209ENST00000448497 KIF6Q6ZMV9 814 aa8.48□□□□□ -1.05
RFC4-209ENST00000448497 IL27Q8NEV9 243 aa8.48□□□□□ -1.05
RFC4-209ENST00000448497 TAF1LQ8IZX4 1826 aa8.47□□□□□ -1.05
RFC4-209ENST00000448497 PCCAP05165 728 aaPredicted RBP8.47□□□□□ -1.05
RFC4-209ENST00000448497 PIP4K2AP48426 406 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms