RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 PSMD2Q13200 908 aa12.44□□□□□ -0.42
LINC00342-202ENST00000448494 FOXD4L6Q3SYB3 417 aaPredicted RBP12.44□□□□□ -0.42
LINC00342-202ENST00000448494 ANO6Q4KMQ2 910 aa12.44□□□□□ -0.42
LINC00342-202ENST00000448494 TTC22Q5TAA0 569 aa12.44□□□□□ -0.42
LINC00342-202ENST00000448494 FOXD4L3Q6VB84 417 aaPredicted RBP12.44□□□□□ -0.42
LINC00342-202ENST00000448494 AMOTL1Q8IY63 956 aa12.44□□□□□ -0.42
LINC00342-202ENST00000448494 TMEM57Q8N5G2 664 aa12.44□□□□□ -0.42
LINC00342-202ENST00000448494 CNNM3Q8NE01 707 aa12.44□□□□□ -0.42
LINC00342-202ENST00000448494 CHCHD3Q9NX63 227 aaKnown RBP12.44□□□□□ -0.42
LINC00342-202ENST00000448494 RUNDC1Q96C34 613 aa12.44□□□□□ -0.42
LINC00342-202ENST00000448494 NUP62CLQ9H1M0 184 aa12.44□□□□□ -0.42
LINC00342-202ENST00000448494 PDE11AQ9HCR9 933 aa12.44□□□□□ -0.42
LINC00342-202ENST00000448494 SMC3Q9UQE7 1217 aa12.44□□□□□ -0.42
LINC00342-202ENST00000448494 PPIP5K1Q6PFW1 1433 aa12.44□□□□□ -0.42
LINC00342-202ENST00000448494 INPP5BP32019 993 aa12.43□□□□□ -0.42
LINC00342-202ENST00000448494 E4F1Q66K89 784 aaPredicted RBP12.43□□□□□ -0.42
LINC00342-202ENST00000448494 PARD6BQ9BYG5 372 aa12.43□□□□□ -0.42
LINC00342-202ENST00000448494 HOMER3Q9NSC5 361 aa12.43□□□□□ -0.42
LINC00342-202ENST00000448494 FAN1Q9Y2M0 1017 aa12.43□□□□□ -0.42
LINC00342-202ENST00000448494 FAM169AQ9Y6X4 670 aa12.43□□□□□ -0.42
LINC00342-202ENST00000448494 POLR3AO14802 1390 aaPredicted RBP12.43□□□□□ -0.42
LINC00342-202ENST00000448494 AP1G2O75843 785 aa12.43□□□□□ -0.42
LINC00342-202ENST00000448494 FAM163BP0C2L3 166 aa12.43□□□□□ -0.42
LINC00342-202ENST00000448494 ABCD1P33897 745 aa12.43□□□□□ -0.42
LINC00342-202ENST00000448494 GCKP35557 465 aa12.43□□□□□ -0.42
LINC00342-202ENST00000448494 SLC8A3P57103 927 aa12.43□□□□□ -0.42
LINC00342-202ENST00000448494 RSRC2Q7L4I2 434 aaKnown RBP12.43□□□□□ -0.42
LINC00342-202ENST00000448494 KIAA1328Q86T90 577 aa12.43□□□□□ -0.42
LINC00342-202ENST00000448494 TCP11Q8WWU5 503 aa12.43□□□□□ -0.42
LINC00342-202ENST00000448494 XAGE2Q96GT9 111 aa12.43□□□□□ -0.42
LINC00342-202ENST00000448494 CARD6Q9BX69 1037 aa12.43□□□□□ -0.42
LINC00342-202ENST00000448494 ADGBQ8N7X0 1667 aa12.43□□□□□ -0.42
LINC00342-202ENST00000448494 RGS12O14924 1447 aa12.43□□□□□ -0.42
LINC00342-202ENST00000448494 ASXL2Q76L83 1435 aa12.43□□□□□ -0.42
LINC00342-202ENST00000448494 TTC21BQ7Z4L5 1316 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 MED14O60244 1454 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 MYOM2P54296 1465 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 EME2A4GXA9 379 aaPredicted RBP12.42□□□□□ -0.42
LINC00342-202ENST00000448494 EBAG9O00559 213 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 ARID5BQ14865 1188 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 ISM2Q6H9L7 571 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 RCSD1Q6JBY9 416 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 RBM43Q6ZSC3 357 aaKnown RBP12.42□□□□□ -0.42
LINC00342-202ENST00000448494 KDM4CQ9H3R0 1056 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 TBC1D2BQ9UPU7 963 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 MSH6P52701 1360 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 PES1O00541 588 aaKnown RBP12.42□□□□□ -0.42
LINC00342-202ENST00000448494 CD151P48509 253 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 TMEM132AQ24JP5 1023 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 HSP90B2PQ58FF3 399 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 GORABQ5T7V8 394 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 CEP112Q8N8E3 955 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 PIK3R5Q8WYR1 880 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 OSBPL5Q9H0X9 879 aaPredicted RBP12.42□□□□□ -0.42
LINC00342-202ENST00000448494 BICC1Q9H694 974 aaKnown RBP12.42□□□□□ -0.42
LINC00342-202ENST00000448494 IMPACTQ9P2X3 320 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 NOS1P29475 1434 aa12.42□□□□□ -0.42
LINC00342-202ENST00000448494 MAP3K4Q9Y6R4 1608 aa12.41□□□□□ -0.42
LINC00342-202ENST00000448494 FIBPO43427 364 aa12.41□□□□□ -0.42
LINC00342-202ENST00000448494 CLNS1AP54105 237 aaKnown RBP12.41□□□□□ -0.42
LINC00342-202ENST00000448494 VPS53Q5VIR6 699 aa12.41□□□□□ -0.42
LINC00342-202ENST00000448494 RINLQ6ZS11 566 aa12.41□□□□□ -0.42
LINC00342-202ENST00000448494 PLEKHM2Q8IWE5 1019 aa12.41□□□□□ -0.42
LINC00342-202ENST00000448494 PRAM1Q96QH2 718 aa12.41□□□□□ -0.42
LINC00342-202ENST00000448494 TSPAN18Q96SJ8 248 aa12.41□□□□□ -0.42
LINC00342-202ENST00000448494 CRACR2AQ9BSW2 395 aa12.41□□□□□ -0.42
LINC00342-202ENST00000448494 ZNF165P49910 485 aa12.41□□□□□ -0.42
LINC00342-202ENST00000448494 PDIA5Q14554 519 aa12.41□□□□□ -0.42
LINC00342-202ENST00000448494 DNAJC14Q6Y2X3 702 aaPredicted RBP12.41□□□□□ -0.42
LINC00342-202ENST00000448494 POTEB2H3BUK9 544 aa12.4□□□□□ -0.42
LINC00342-202ENST00000448494 FSBPO95073 299 aa12.4□□□□□ -0.42
LINC00342-202ENST00000448494 IMPDH2P12268 514 aa12.4□□□□□ -0.42
LINC00342-202ENST00000448494 TXLNAP40222 546 aa12.4□□□□□ -0.42
LINC00342-202ENST00000448494 USP5P45974 858 aa12.4□□□□□ -0.42
LINC00342-202ENST00000448494 CCDC150Q8NCX0 1101 aa12.4□□□□□ -0.42
LINC00342-202ENST00000448494 IL17RAQ96F46 866 aa12.4□□□□□ -0.42
LINC00342-202ENST00000448494 YTHDC2Q9H6S0 1430 aaKnown RBP12.4□□□□□ -0.42
LINC00342-202ENST00000448494 EIF2AK4Q9P2K8 1649 aaKnown RBP12.4□□□□□ -0.42
LINC00342-202ENST00000448494 F13A1P00488 732 aa12.4□□□□□ -0.43
LINC00342-202ENST00000448494 RAB27AP51159 221 aa12.4□□□□□ -0.43
LINC00342-202ENST00000448494 CDCA2Q69YH5 1023 aaPredicted RBP12.4□□□□□ -0.43
LINC00342-202ENST00000448494 ARMCX6Q7L4S7 300 aa12.4□□□□□ -0.43
LINC00342-202ENST00000448494 KIF9Q9HAQ2 790 aa12.4□□□□□ -0.43
LINC00342-202ENST00000448494 SHANK2Q9UPX8 1470 aa12.39□□□□□ -0.43
LINC00342-202ENST00000448494 ERLIN1O75477 346 aa12.39□□□□□ -0.43
LINC00342-202ENST00000448494 URI1O94763 535 aaPredicted RBP12.39□□□□□ -0.43
LINC00342-202ENST00000448494 FNTAP49354 379 aa12.39□□□□□ -0.43
LINC00342-202ENST00000448494 SF3A1Q15459 793 aaKnown RBP12.39□□□□□ -0.43
LINC00342-202ENST00000448494 BEND6Q5SZJ8 279 aaPredicted RBP12.39□□□□□ -0.43
LINC00342-202ENST00000448494 NFXL1Q6ZNB6 911 aa12.39□□□□□ -0.43
LINC00342-202ENST00000448494 HOMER1Q86YM7 354 aa12.39□□□□□ -0.43
LINC00342-202ENST00000448494 MAGEC3Q8TD91 643 aa12.39□□□□□ -0.43
LINC00342-202ENST00000448494 GOLGA1Q92805 767 aa12.39□□□□□ -0.43
LINC00342-202ENST00000448494 MMTAG2Q9BU76 263 aaKnown RBP12.39□□□□□ -0.43
LINC00342-202ENST00000448494 TNMDQ9H2S6 317 aa12.39□□□□□ -0.43
LINC00342-202ENST00000448494 CD248Q9HCU0 757 aa12.39□□□□□ -0.43
LINC00342-202ENST00000448494 BATF3Q9NR55 127 aa12.39□□□□□ -0.43
LINC00342-202ENST00000448494 PARP3Q9Y6F1 533 aa12.39□□□□□ -0.43
LINC00342-202ENST00000448494 GOLGA6L19H0YKK7 550 aa12.38□□□□□ -0.43
LINC00342-202ENST00000448494 NCAPG2Q86XI2 1143 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms