RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 LTBP3Q9NS15 1303 aa14.59□□□□□ -0.07
LINC00408-201ENST00000447784 ZC3H4Q9UPT8 1303 aaKnown RBP14.59□□□□□ -0.07
LINC00408-201ENST00000447784 PCCAP05165 728 aaPredicted RBP14.58□□□□□ -0.08
LINC00408-201ENST00000447784 RASSF7Q02833 373 aa14.58□□□□□ -0.08
LINC00408-201ENST00000447784 RTL5Q5HYW3 569 aaPredicted RBP14.58□□□□□ -0.08
LINC00408-201ENST00000447784 TMEM57Q8N5G2 664 aa14.58□□□□□ -0.08
LINC00408-201ENST00000447784 PANK1Q8TE04 598 aa14.58□□□□□ -0.08
LINC00408-201ENST00000447784 FAM89AQ96GI7 184 aa14.58□□□□□ -0.08
LINC00408-201ENST00000447784 NLRP3Q96P20 1036 aa14.58□□□□□ -0.08
LINC00408-201ENST00000447784 RNF39Q9H2S5 420 aa14.58□□□□□ -0.08
LINC00408-201ENST00000447784 CHMP4BQ9H444 224 aaKnown RBP14.58□□□□□ -0.08
LINC00408-201ENST00000447784 GRM8O00222 908 aa14.57□□□□□ -0.08
LINC00408-201ENST00000447784 CCDC93Q567U6 631 aa14.57□□□□□ -0.08
LINC00408-201ENST00000447784 UBE3BQ7Z3V4 1068 aa14.57□□□□□ -0.08
LINC00408-201ENST00000447784 TNNQ9UQP3 1299 aa14.57□□□□□ -0.08
LINC00408-201ENST00000447784 COL11A2P13942 1736 aaPredicted RBP14.56□□□□□ -0.08
LINC00408-201ENST00000447784 H7C1W4 665 aa14.56□□□□□ -0.08
LINC00408-201ENST00000447784 IRS4O14654 1257 aaPredicted RBP14.56□□□□□ -0.08
LINC00408-201ENST00000447784 PRELPP51888 382 aa14.56□□□□□ -0.08
LINC00408-201ENST00000447784 C1QTNF8P60827 252 aa14.56□□□□□ -0.08
LINC00408-201ENST00000447784 ZNF526Q8TF50 670 aaPredicted RBP14.56□□□□□ -0.08
LINC00408-201ENST00000447784 JARID2Q92833 1246 aaPredicted RBP14.56□□□□□ -0.08
LINC00408-201ENST00000447784 RPGRQ92834 1020 aaKnown RBP14.56□□□□□ -0.08
LINC00408-201ENST00000447784 CRAMP1Q96RY5 1269 aa14.56□□□□□ -0.08
LINC00408-201ENST00000447784 TAOK3Q9H2K8 898 aa14.56□□□□□ -0.08
LINC00408-201ENST00000447784 ZNF219Q9P2Y4 722 aaPredicted RBP14.56□□□□□ -0.08
LINC00408-201ENST00000447784 NUP98P52948 1817 aa14.55□□□□□ -0.08
LINC00408-201ENST00000447784 GNAI3P08754 354 aa14.55□□□□□ -0.08
LINC00408-201ENST00000447784 UBTFL1P0CB47 393 aaPredicted RBP14.55□□□□□ -0.08
LINC00408-201ENST00000447784 RLBP1P12271 317 aa14.55□□□□□ -0.08
LINC00408-201ENST00000447784 CC2D2BQ6DHV5 1058 aa14.55□□□□□ -0.08
LINC00408-201ENST00000447784 RTKN2Q8IZC4 609 aa14.55□□□□□ -0.08
LINC00408-201ENST00000447784 RBM17Q96I25 401 aaKnown RBP14.55□□□□□ -0.08
LINC00408-201ENST00000447784 DDX19BQ9UMR2 479 aa14.55□□□□□ -0.08
LINC00408-201ENST00000447784 COG6Q9Y2V7 657 aa14.55□□□□□ -0.08
LINC00408-201ENST00000447784 HCLS1P14317 486 aaPredicted RBP14.54□□□□□ -0.08
LINC00408-201ENST00000447784 MVPQ14764 893 aaKnown RBP14.54□□□□□ -0.08
LINC00408-201ENST00000447784 GRIPAP1Q4V328 841 aa14.54□□□□□ -0.08
LINC00408-201ENST00000447784 USP44Q9H0E7 712 aa14.54□□□□□ -0.08
LINC00408-201ENST00000447784 KDM2BQ8NHM5 1336 aa14.54□□□□□ -0.08
LINC00408-201ENST00000447784 CDHR2Q9BYE9 1310 aa14.53□□□□□ -0.08
LINC00408-201ENST00000447784 KIF3CO14782 793 aa14.53□□□□□ -0.08
LINC00408-201ENST00000447784 FKBP4Q02790 459 aaKnown RBP eCLIP14.53□□□□□ -0.08
LINC00408-201ENST00000447784 C20orf194Q5TEA3 1177 aa14.53□□□□□ -0.08
LINC00408-201ENST00000447784 C3orf67Q6ZVT6 689 aa14.53□□□□□ -0.08
LINC00408-201ENST00000447784 PDE8AO60658 829 aa14.52□□□□□ -0.09
LINC00408-201ENST00000447784 NBPF7P0C2Y1 421 aaPredicted RBP14.52□□□□□ -0.09
LINC00408-201ENST00000447784 SYNE4Q8N205 404 aa14.52□□□□□ -0.09
LINC00408-201ENST00000447784 TNRC6CQ9HCJ0 1690 aaKnown RBP14.52□□□□□ -0.09
LINC00408-201ENST00000447784 UTYO14607 1347 aa14.51□□□□□ -0.09
LINC00408-201ENST00000447784 GLTPD2A6NH11 291 aa14.51□□□□□ -0.09
LINC00408-201ENST00000447784 GNAI2P04899 355 aa14.51□□□□□ -0.09
LINC00408-201ENST00000447784 CACNB1Q02641 598 aaPredicted RBP14.51□□□□□ -0.09
LINC00408-201ENST00000447784 PSMD1Q99460 953 aa14.51□□□□□ -0.09
LINC00408-201ENST00000447784 MEIS3Q99687 375 aa14.51□□□□□ -0.09
LINC00408-201ENST00000447784 SNED1Q8TER0 1413 aa14.5□□□□□ -0.09
LINC00408-201ENST00000447784 SLX4Q8IY92 1834 aa14.5□□□□□ -0.09
LINC00408-201ENST00000447784 PPEF1O14829 653 aaPredicted RBP14.5□□□□□ -0.09
LINC00408-201ENST00000447784 ZBTB7BO15156 539 aaPredicted RBP14.5□□□□□ -0.09
LINC00408-201ENST00000447784 BBOX1O75936 387 aa14.5□□□□□ -0.09
LINC00408-201ENST00000447784 NEFLP07196 543 aa14.5□□□□□ -0.09
LINC00408-201ENST00000447784 SF3B3Q15393 1217 aaKnown RBP14.5□□□□□ -0.09
LINC00408-201ENST00000447784 CCDC152Q4G0S7 254 aa14.5□□□□□ -0.09
LINC00408-201ENST00000447784 DPY19L2Q6NUT2 758 aa14.5□□□□□ -0.09
LINC00408-201ENST00000447784 NMRK2Q9NPI5 230 aa14.5□□□□□ -0.09
LINC00408-201ENST00000447784 CHMP3Q9Y3E7 222 aa14.5□□□□□ -0.09
LINC00408-201ENST00000447784 CASP7P55210 303 aa14.49□□□□□ -0.09
LINC00408-201ENST00000447784 CTSWP56202 376 aa14.49□□□□□ -0.09
LINC00408-201ENST00000447784 OLFM4Q6UX06 510 aa14.49□□□□□ -0.09
LINC00408-201ENST00000447784 DDX46Q7L014 1031 aaKnown RBP14.49□□□□□ -0.09
LINC00408-201ENST00000447784 SUCLG2Q96I99 432 aa14.49□□□□□ -0.09
LINC00408-201ENST00000447784 PLA2G12BQ9BX93 195 aa14.49□□□□□ -0.09
LINC00408-201ENST00000447784 TMX4Q9H1E5 349 aaPredicted RBP14.49□□□□□ -0.09
LINC00408-201ENST00000447784 ATP6V0A2Q9Y487 856 aa14.49□□□□□ -0.09
LINC00408-201ENST00000447784 ARFGEF2Q9Y6D5 1785 aa14.49□□□□□ -0.09
LINC00408-201ENST00000447784 ANKRD36CQ5JPF3 1778 aa14.48□□□□□ -0.09
LINC00408-201ENST00000447784 TOMM70O94826 608 aa14.48□□□□□ -0.09
LINC00408-201ENST00000447784 GRAPQ13588 217 aa14.48□□□□□ -0.09
LINC00408-201ENST00000447784 TMC4Q7Z404 712 aa14.48□□□□□ -0.09
LINC00408-201ENST00000447784 GRAPLQ8TC17 118 aaPredicted RBP14.48□□□□□ -0.09
LINC00408-201ENST00000447784 CCDC85AQ96PX6 553 aaPredicted RBP14.48□□□□□ -0.09
LINC00408-201ENST00000447784 CRBNQ96SW2 442 aa14.48□□□□□ -0.09
LINC00408-201ENST00000447784 LRRFIP2Q9Y608 721 aaKnown RBP14.48□□□□□ -0.09
LINC00408-201ENST00000447784 IARSP41252 1262 aaKnown RBP14.47□□□□□ -0.09
LINC00408-201ENST00000447784 CCDC57Q2TAC2 916 aa14.47□□□□□ -0.09
LINC00408-201ENST00000447784 LMBR1LQ6UX01 489 aa14.47□□□□□ -0.09
LINC00408-201ENST00000447784 SP8Q8IXZ3 490 aa14.47□□□□□ -0.09
LINC00408-201ENST00000447784 BICC1Q9H694 974 aaKnown RBP14.47□□□□□ -0.09
LINC00408-201ENST00000447784 ZNF277Q9NRM2 450 aaPredicted RBP14.47□□□□□ -0.09
LINC00408-201ENST00000447784 FER1L6Q2WGJ9 1857 aa14.46□□□□□ -0.09
LINC00408-201ENST00000447784 IRX6P78412 446 aaPredicted RBP14.46□□□□□ -0.09
LINC00408-201ENST00000447784 FOXO4P98177 505 aa14.46□□□□□ -0.09
LINC00408-201ENST00000447784 IFIT5Q13325 482 aaKnown RBP14.46□□□□□ -0.09
LINC00408-201ENST00000447784 TAF7LQ5H9L4 462 aa14.46□□□□□ -0.09
LINC00408-201ENST00000447784 TTLL11Q8NHH1 800 aa14.46□□□□□ -0.09
LINC00408-201ENST00000447784 VPS33BQ9H267 617 aa14.46□□□□□ -0.09
LINC00408-201ENST00000447784 RRAGCQ9HB90 399 aa14.46□□□□□ -0.09
LINC00408-201ENST00000447784 ANKRD18BA2A2Z9 1011 aa14.45□□□□□ -0.1
LINC00408-201ENST00000447784 SBF1O95248 1867 aa14.45□□□□□ -0.1
LINC00408-201ENST00000447784 CSF1RP07333 972 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms