RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 KSR2Q6VAB6 950 aa22.33■■□□□ 1.17
PDCD4-203ENST00000444997 NIM1KQ8IY84 436 aa22.33■■□□□ 1.17
PDCD4-203ENST00000444997 GPC2Q8N158 579 aa22.33■■□□□ 1.17
PDCD4-203ENST00000444997 MAP3K2Q9Y2U5 619 aa22.33■■□□□ 1.17
PDCD4-203ENST00000444997 FANCIQ9NVI1 1328 aa22.32■■□□□ 1.16
PDCD4-203ENST00000444997 NEXNQ0ZGT2 675 aa22.32■■□□□ 1.16
PDCD4-203ENST00000444997 HACL1Q9UJ83 578 aa22.32■■□□□ 1.16
PDCD4-203ENST00000444997 PI4KAP2A4QPH2 592 aa22.31■■□□□ 1.16
PDCD4-203ENST00000444997 PCCAP05165 728 aaPredicted RBP22.31■■□□□ 1.16
PDCD4-203ENST00000444997 CHADLQ6NUI6 762 aa22.31■■□□□ 1.16
PDCD4-203ENST00000444997 PI4KAP1Q8N8J0 262 aa22.31■■□□□ 1.16
PDCD4-203ENST00000444997 RTFDC1Q9BY42 306 aaPredicted RBP22.31■■□□□ 1.16
PDCD4-203ENST00000444997 GJA3Q9Y6H8 435 aa22.31■■□□□ 1.16
PDCD4-203ENST00000444997 AOC3Q16853 763 aa22.3■■□□□ 1.16
PDCD4-203ENST00000444997 SLC51AQ86UW1 340 aa22.3■■□□□ 1.16
PDCD4-203ENST00000444997 TAF1DQ9H5J8 278 aaPredicted RBP22.3■■□□□ 1.16
PDCD4-203ENST00000444997 MYH16Q9H6N6 1097 aa22.3■■□□□ 1.16
PDCD4-203ENST00000444997 PDE8AO60658 829 aa22.28■■□□□ 1.16
PDCD4-203ENST00000444997 EAPPQ56P03 285 aaPredicted RBP22.28■■□□□ 1.16
PDCD4-203ENST00000444997 LDHDQ86WU2 507 aa22.28■■□□□ 1.16
PDCD4-203ENST00000444997 LMOD1P29536 600 aaPredicted RBP22.27■■□□□ 1.16
PDCD4-203ENST00000444997 EPHX2P34913 555 aa22.27■■□□□ 1.16
PDCD4-203ENST00000444997 RPS8P62241 208 aaKnown RBP22.27■■□□□ 1.16
PDCD4-203ENST00000444997 EXOSC9Q06265 439 aaKnown RBP22.27■■□□□ 1.16
PDCD4-203ENST00000444997 CCDC152Q4G0S7 254 aa22.27■■□□□ 1.16
PDCD4-203ENST00000444997 PNMA8AQ86V59 439 aaPredicted RBP22.27■■□□□ 1.16
PDCD4-203ENST00000444997 CELF1Q92879 486 aaKnown RBP22.27■■□□□ 1.16
PDCD4-203ENST00000444997 LAMB2P55268 1798 aa22.27■■□□□ 1.16
PDCD4-203ENST00000444997 VAMP4O75379 141 aa22.26■■□□□ 1.15
PDCD4-203ENST00000444997 FLIIQ13045 1269 aa22.26■■□□□ 1.15
PDCD4-203ENST00000444997 G2E3Q7L622 706 aa22.26■■□□□ 1.15
PDCD4-203ENST00000444997 DNAJC5GQ8N7S2 189 aa22.26■■□□□ 1.15
PDCD4-203ENST00000444997 ZNRF3Q9ULT6 936 aa22.26■■□□□ 1.15
PDCD4-203ENST00000444997 CLEC11AQ9Y240 323 aa22.26■■□□□ 1.15
PDCD4-203ENST00000444997 POTEIP0CG38 1075 aa22.25■■□□□ 1.15
PDCD4-203ENST00000444997 POTEJP0CG39 1038 aa22.25■■□□□ 1.15
PDCD4-203ENST00000444997 HTRA3P83110 453 aa22.25■■□□□ 1.15
PDCD4-203ENST00000444997 KIAA2012Q0VF49 1180 aa22.25■■□□□ 1.15
PDCD4-203ENST00000444997 FKBP5Q13451 457 aaPredicted RBP22.25■■□□□ 1.15
PDCD4-203ENST00000444997 JARID2Q92833 1246 aaPredicted RBP22.25■■□□□ 1.15
PDCD4-203ENST00000444997 NSFL1CQ9UNZ2 370 aaKnown RBP22.25■■□□□ 1.15
PDCD4-203ENST00000444997 DDX60Q8IY21 1712 aaKnown RBP22.25■■□□□ 1.15
PDCD4-203ENST00000444997 IGKV5-2P06315 115 aa22.24■■□□□ 1.15
PDCD4-203ENST00000444997 CDHR2Q9BYE9 1310 aa22.24■■□□□ 1.15
PDCD4-203ENST00000444997 SCN4AP35499 1836 aa22.24■■□□□ 1.15
PDCD4-203ENST00000444997 COL4A5P29400 1685 aa22.23■■□□□ 1.15
PDCD4-203ENST00000444997 CEP350Q5VT06 3117 aa22.22■■□□□ 1.15
PDCD4-203ENST00000444997 NEURL1BA8MQ27 555 aa22.22■■□□□ 1.15
PDCD4-203ENST00000444997 C6orf229H3BNL8 230 aa22.22■■□□□ 1.15
PDCD4-203ENST00000444997 WASHC4Q2M389 1173 aa22.22■■□□□ 1.15
PDCD4-203ENST00000444997 CWF19L2Q2TBE0 894 aaKnown RBP22.22■■□□□ 1.15
PDCD4-203ENST00000444997 KLRG1Q96E93 195 aa22.22■■□□□ 1.15
PDCD4-203ENST00000444997 SPINK5Q9NQ38 1064 aaPredicted RBP22.22■■□□□ 1.15
PDCD4-203ENST00000444997 TNIP1Q15025 636 aa22.21■■□□□ 1.15
PDCD4-203ENST00000444997 DNAAF4Q8WXU2 420 aa22.21■■□□□ 1.15
PDCD4-203ENST00000444997 CCDC85AQ96PX6 553 aaPredicted RBP22.21■■□□□ 1.15
PDCD4-203ENST00000444997 EYA3Q99504 573 aa22.21■■□□□ 1.15
PDCD4-203ENST00000444997 SEC31BQ9NQW1 1179 aa22.21■■□□□ 1.15
PDCD4-203ENST00000444997 CTSWP56202 376 aa22.2■■□□□ 1.14
PDCD4-203ENST00000444997 GPSM2P81274 684 aa22.2■■□□□ 1.14
PDCD4-203ENST00000444997 CXCL9Q07325 125 aa22.2■■□□□ 1.14
PDCD4-203ENST00000444997 CIAPIN1Q6FI81 312 aa22.2■■□□□ 1.14
PDCD4-203ENST00000444997 ANKRD18AQ8IVF6 992 aa22.2■■□□□ 1.14
PDCD4-203ENST00000444997 SCNN1DP51172 638 aa22.19■■□□□ 1.14
PDCD4-203ENST00000444997 CDC5LQ99459 802 aaKnown RBP22.19■■□□□ 1.14
PDCD4-203ENST00000444997 ANKIB1Q9P2G1 1089 aa22.19■■□□□ 1.14
PDCD4-203ENST00000444997 H7C1W4 665 aa22.18■■□□□ 1.14
PDCD4-203ENST00000444997 EPS15P42566 896 aa22.18■■□□□ 1.14
PDCD4-203ENST00000444997 UBE3BQ7Z3V4 1068 aa22.18■■□□□ 1.14
PDCD4-203ENST00000444997 LINS1Q8NG48 757 aa22.18■■□□□ 1.14
PDCD4-203ENST00000444997 RIMBP2O15034 1052 aa22.17■■□□□ 1.14
PDCD4-203ENST00000444997 RAD17O75943 681 aa22.17■■□□□ 1.14
PDCD4-203ENST00000444997 GCKRQ14397 625 aa22.17■■□□□ 1.14
PDCD4-203ENST00000444997 USP50Q70EL3 339 aaPredicted RBP22.17■■□□□ 1.14
PDCD4-203ENST00000444997 BCL2L13Q9BXK5 485 aa22.17■■□□□ 1.14
PDCD4-203ENST00000444997 ZC3H12CQ9C0D7 883 aaKnown RBP22.17■■□□□ 1.14
PDCD4-203ENST00000444997 CREBZFQ9NS37 354 aa22.17■■□□□ 1.14
PDCD4-203ENST00000444997 POLLQ9UGP5 575 aa22.17■■□□□ 1.14
PDCD4-203ENST00000444997 TAF1P21675 1872 aa22.16■■□□□ 1.14
PDCD4-203ENST00000444997 G3V3G9 751 aa22.16■■□□□ 1.14
PDCD4-203ENST00000444997 DCAF8Q5TAQ9 597 aa22.16■■□□□ 1.14
PDCD4-203ENST00000444997 TTLL11Q8NHH1 800 aa22.16■■□□□ 1.14
PDCD4-203ENST00000444997 TBC1D16Q8TBP0 767 aa22.16■■□□□ 1.14
PDCD4-203ENST00000444997 PODXL2Q9NZ53 605 aa22.16■■□□□ 1.14
PDCD4-203ENST00000444997 GPRC5DQ9NZD1 345 aa22.16■■□□□ 1.14
PDCD4-203ENST00000444997 GGA1Q9UJY5 639 aa22.16■■□□□ 1.14
PDCD4-203ENST00000444997 LRRC37AA6NMS7 1700 aa22.15■■□□□ 1.14
PDCD4-203ENST00000444997 ZNF521Q96K83 1311 aa22.15■■□□□ 1.14
PDCD4-203ENST00000444997 UFL1O94874 794 aa22.15■■□□□ 1.14
PDCD4-203ENST00000444997 GMPSP49915 693 aaPredicted RBP22.15■■□□□ 1.14
PDCD4-203ENST00000444997 MAP1SQ66K74 1059 aaPredicted RBP22.15■■□□□ 1.14
PDCD4-203ENST00000444997 CNTROBQ8N137 903 aa22.15■■□□□ 1.14
PDCD4-203ENST00000444997 ADARB2Q9NS39 739 aaKnown RBP22.15■■□□□ 1.14
PDCD4-203ENST00000444997 ITGBL1O95965 494 aaPredicted RBP22.14■■□□□ 1.13
PDCD4-203ENST00000444997 DBNDD1Q9H9R9 158 aa22.14■■□□□ 1.13
PDCD4-203ENST00000444997 DUOX1Q9NRD9 1551 aa22.13■■□□□ 1.13
PDCD4-203ENST00000444997 PASKQ96RG2 1323 aa22.13■■□□□ 1.13
PDCD4-203ENST00000444997 YDJCA8MPS7 323 aa22.13■■□□□ 1.13
PDCD4-203ENST00000444997 E9PSI1 815 aa22.13■■□□□ 1.13
PDCD4-203ENST00000444997 JMYQ8N9B5 988 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms