RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CELF1Q92879 486 aaKnown RBP14.03□□□□□ -0.16
SF3A1-203ENST00000444440 L3MBTL3Q96JM7 780 aaPredicted RBP14.03□□□□□ -0.16
SF3A1-203ENST00000444440 MAP3K2Q9Y2U5 619 aa14.03□□□□□ -0.16
SF3A1-203ENST00000444440 IRS4O14654 1257 aaPredicted RBP14.02□□□□□ -0.17
SF3A1-203ENST00000444440 IGKV5-2P06315 115 aa14.02□□□□□ -0.17
SF3A1-203ENST00000444440 APLP1P51693 650 aa14.02□□□□□ -0.17
SF3A1-203ENST00000444440 EXOSC9Q06265 439 aaKnown RBP14.02□□□□□ -0.17
SF3A1-203ENST00000444440 SF3B3Q15393 1217 aaKnown RBP14.02□□□□□ -0.17
SF3A1-203ENST00000444440 AOC3Q16853 763 aa14.02□□□□□ -0.17
SF3A1-203ENST00000444440 SMC1BQ8NDV3 1235 aa14.02□□□□□ -0.17
SF3A1-203ENST00000444440 METTL22Q9BUU2 404 aaPredicted RBP14.02□□□□□ -0.17
SF3A1-203ENST00000444440 PI4KAP2A4QPH2 592 aa14.01□□□□□ -0.17
SF3A1-203ENST00000444440 DDX46Q7L014 1031 aaKnown RBP14.01□□□□□ -0.17
SF3A1-203ENST00000444440 WDR63Q8IWG1 891 aa14.01□□□□□ -0.17
SF3A1-203ENST00000444440 SP8Q8IXZ3 490 aa14.01□□□□□ -0.17
SF3A1-203ENST00000444440 PI4KAP1Q8N8J0 262 aa14.01□□□□□ -0.17
SF3A1-203ENST00000444440 ZBTB38Q8NAP3 1195 aaPredicted RBP14.01□□□□□ -0.17
SF3A1-203ENST00000444440 RTFDC1Q9BY42 306 aaPredicted RBP14.01□□□□□ -0.17
SF3A1-203ENST00000444440 TAF1DQ9H5J8 278 aaPredicted RBP14.01□□□□□ -0.17
SF3A1-203ENST00000444440 ZNF521Q96K83 1311 aa14□□□□□ -0.17
SF3A1-203ENST00000444440 VAMP4O75379 141 aa14□□□□□ -0.17
SF3A1-203ENST00000444440 BBOX1O75936 387 aa14□□□□□ -0.17
SF3A1-203ENST00000444440 SLC4A2P04920 1241 aa14□□□□□ -0.17
SF3A1-203ENST00000444440 CWF19L2Q2TBE0 894 aaKnown RBP14□□□□□ -0.17
SF3A1-203ENST00000444440 KSR2Q6VAB6 950 aa14□□□□□ -0.17
SF3A1-203ENST00000444440 LARGE2Q8N3Y3 721 aa14□□□□□ -0.17
SF3A1-203ENST00000444440 CCDC191Q8NCU4 936 aa14□□□□□ -0.17
SF3A1-203ENST00000444440 SEC31BQ9NQW1 1179 aa14□□□□□ -0.17
SF3A1-203ENST00000444440 PPIP5K2O43314 1243 aa13.99□□□□□ -0.17
SF3A1-203ENST00000444440 PCCAP05165 728 aaPredicted RBP13.99□□□□□ -0.17
SF3A1-203ENST00000444440 CWC25Q9NXE8 425 aaPredicted RBP13.99□□□□□ -0.17
SF3A1-203ENST00000444440 SCNN1DP51172 638 aa13.98□□□□□ -0.17
SF3A1-203ENST00000444440 GRIPAP1Q4V328 841 aa13.98□□□□□ -0.17
SF3A1-203ENST00000444440 DPP8Q6V1X1 898 aaPredicted RBP13.98□□□□□ -0.17
SF3A1-203ENST00000444440 GPC2Q8N158 579 aa13.98□□□□□ -0.17
SF3A1-203ENST00000444440 MPNDQ8N594 471 aa13.98□□□□□ -0.17
SF3A1-203ENST00000444440 JDP2Q8WYK2 163 aa13.98□□□□□ -0.17
SF3A1-203ENST00000444440 CCDC85AQ96PX6 553 aaPredicted RBP13.98□□□□□ -0.17
SF3A1-203ENST00000444440 STK31Q9BXU1 1019 aa13.98□□□□□ -0.17
SF3A1-203ENST00000444440 GJA3Q9Y6H8 435 aa13.98□□□□□ -0.17
SF3A1-203ENST00000444440 YDJCA8MPS7 323 aa13.97□□□□□ -0.17
SF3A1-203ENST00000444440 NEURL1BA8MQ27 555 aa13.97□□□□□ -0.17
SF3A1-203ENST00000444440 DDX58O95786 925 aaKnown RBP13.97□□□□□ -0.17
SF3A1-203ENST00000444440 GPSM2P81274 684 aa13.97□□□□□ -0.17
SF3A1-203ENST00000444440 FLIIQ13045 1269 aa13.97□□□□□ -0.17
SF3A1-203ENST00000444440 CHADLQ6NUI6 762 aa13.97□□□□□ -0.17
SF3A1-203ENST00000444440 GPR101Q96P66 508 aaPredicted RBP13.97□□□□□ -0.17
SF3A1-203ENST00000444440 HACL1Q9UJ83 578 aa13.97□□□□□ -0.17
SF3A1-203ENST00000444440 CDHR2Q9BYE9 1310 aa13.96□□□□□ -0.17
SF3A1-203ENST00000444440 IQCA1LA6NCM1 817 aa13.96□□□□□ -0.17
SF3A1-203ENST00000444440 PDE8AO60658 829 aa13.96□□□□□ -0.17
SF3A1-203ENST00000444440 EPHX2P34913 555 aa13.96□□□□□ -0.17
SF3A1-203ENST00000444440 EIF6P56537 245 aaKnown RBP13.96□□□□□ -0.17
SF3A1-203ENST00000444440 KIAA2012Q0VF49 1180 aa13.96□□□□□ -0.17
SF3A1-203ENST00000444440 NIM1KQ8IY84 436 aa13.96□□□□□ -0.17
SF3A1-203ENST00000444440 POLLQ9UGP5 575 aa13.96□□□□□ -0.17
SF3A1-203ENST00000444440 EPS15P42566 896 aa13.95□□□□□ -0.18
SF3A1-203ENST00000444440 CASP7P55210 303 aa13.95□□□□□ -0.18
SF3A1-203ENST00000444440 CXCL9Q07325 125 aa13.95□□□□□ -0.18
SF3A1-203ENST00000444440 EAPPQ56P03 285 aaPredicted RBP13.95□□□□□ -0.18
SF3A1-203ENST00000444440 LDHDQ86WU2 507 aa13.95□□□□□ -0.18
SF3A1-203ENST00000444440 PASKQ96RG2 1323 aa13.94□□□□□ -0.18
SF3A1-203ENST00000444440 F6X3S4 739 aa13.94□□□□□ -0.18
SF3A1-203ENST00000444440 RPS8P62241 208 aaKnown RBP13.94□□□□□ -0.18
SF3A1-203ENST00000444440 FKBP5Q13451 457 aaPredicted RBP13.94□□□□□ -0.18
SF3A1-203ENST00000444440 TMC4Q7Z404 712 aa13.94□□□□□ -0.18
SF3A1-203ENST00000444440 SUPT20HQ8NEM7 779 aa13.94□□□□□ -0.18
SF3A1-203ENST00000444440 KLRG1Q96E93 195 aa13.94□□□□□ -0.18
SF3A1-203ENST00000444440 CHMP4AQ9BY43 222 aa13.94□□□□□ -0.18
SF3A1-203ENST00000444440 VPS33BQ9H267 617 aa13.94□□□□□ -0.18
SF3A1-203ENST00000444440 NSFL1CQ9UNZ2 370 aaKnown RBP13.94□□□□□ -0.18
SF3A1-203ENST00000444440 SHTN1A0MZ66 631 aa13.93□□□□□ -0.18
SF3A1-203ENST00000444440 WTIPA6NIX2 430 aaPredicted RBP13.93□□□□□ -0.18
SF3A1-203ENST00000444440 H7C1W4 665 aa13.93□□□□□ -0.18
SF3A1-203ENST00000444440 RIMBP2O15034 1052 aa13.93□□□□□ -0.18
SF3A1-203ENST00000444440 ITGBL1O95965 494 aaPredicted RBP13.93□□□□□ -0.18
SF3A1-203ENST00000444440 CTSWP56202 376 aa13.93□□□□□ -0.18
SF3A1-203ENST00000444440 UBE3BQ7Z3V4 1068 aa13.93□□□□□ -0.18
SF3A1-203ENST00000444440 TTLL11Q8NHH1 800 aa13.93□□□□□ -0.18
SF3A1-203ENST00000444440 DNAAF4Q8WXU2 420 aa13.93□□□□□ -0.18
SF3A1-203ENST00000444440 TMX4Q9H1E5 349 aaPredicted RBP13.93□□□□□ -0.18
SF3A1-203ENST00000444440 GREM2Q9H772 168 aa13.93□□□□□ -0.18
SF3A1-203ENST00000444440 DBNDD1Q9H9R9 158 aa13.93□□□□□ -0.18
SF3A1-203ENST00000444440 KCNQ5Q9NR82 932 aa13.93□□□□□ -0.18
SF3A1-203ENST00000444440 ZNRF3Q9ULT6 936 aa13.93□□□□□ -0.18
SF3A1-203ENST00000444440 RAD17O75943 681 aa13.92□□□□□ -0.18
SF3A1-203ENST00000444440 FMR1Q06787 632 aaKnown RBP eCLIP13.92□□□□□ -0.18
SF3A1-203ENST00000444440 NEXNQ0ZGT2 675 aa13.92□□□□□ -0.18
SF3A1-203ENST00000444440 GCKRQ14397 625 aa13.92□□□□□ -0.18
SF3A1-203ENST00000444440 CCDC152Q4G0S7 254 aa13.92□□□□□ -0.18
SF3A1-203ENST00000444440 MAP1SQ66K74 1059 aaPredicted RBP13.92□□□□□ -0.18
SF3A1-203ENST00000444440 TBC1D16Q8TBP0 767 aa13.92□□□□□ -0.18
SF3A1-203ENST00000444440 GMPSP49915 693 aaPredicted RBP13.91□□□□□ -0.18
SF3A1-203ENST00000444440 DOK7Q18PE1 504 aa13.91□□□□□ -0.18
SF3A1-203ENST00000444440 MYH16Q9H6N6 1097 aa13.91□□□□□ -0.18
SF3A1-203ENST00000444440 RTL9Q8NET4 1388 aa13.91□□□□□ -0.18
SF3A1-203ENST00000444440 C6orf229H3BNL8 230 aa13.9□□□□□ -0.18
SF3A1-203ENST00000444440 WASHC4Q2M389 1173 aa13.9□□□□□ -0.18
SF3A1-203ENST00000444440 CIAPIN1Q6FI81 312 aa13.9□□□□□ -0.18
SF3A1-203ENST00000444440 JMYQ8N9B5 988 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms