RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 FER1L6Q2WGJ9 1857 aa23■■□□□ 1.27
LRCH1-204ENST00000443945 PTPRCP08575 1304 aa22.99■■□□□ 1.27
LRCH1-204ENST00000443945 CCDC93Q567U6 631 aa22.99■■□□□ 1.27
LRCH1-204ENST00000443945 ZNF526Q8TF50 670 aaPredicted RBP22.99■■□□□ 1.27
LRCH1-204ENST00000443945 SBF1O95248 1867 aa22.99■■□□□ 1.27
LRCH1-204ENST00000443945 CDHR2Q9BYE9 1310 aa22.99■■□□□ 1.27
LRCH1-204ENST00000443945 ZNF784Q8NCA9 323 aaPredicted RBP22.99■■□□□ 1.27
LRCH1-204ENST00000443945 CASP7P55210 303 aa22.98■■□□□ 1.27
LRCH1-204ENST00000443945 SRCIN1Q9C0H9 1055 aa22.98■■□□□ 1.27
LRCH1-204ENST00000443945 TAOK3Q9H2K8 898 aa22.98■■□□□ 1.27
LRCH1-204ENST00000443945 GRAPQ13588 217 aa22.97■■□□□ 1.27
LRCH1-204ENST00000443945 GRAPLQ8TC17 118 aaPredicted RBP22.97■■□□□ 1.27
LRCH1-204ENST00000443945 CTSWP56202 376 aa22.97■■□□□ 1.27
LRCH1-204ENST00000443945 CCDC88AQ3V6T2 1871 aa22.97■■□□□ 1.27
LRCH1-204ENST00000443945 LMNB1P20700 586 aa22.96■■□□□ 1.27
LRCH1-204ENST00000443945 SOGA3Q5TF21 947 aa22.96■■□□□ 1.27
LRCH1-204ENST00000443945 GTF3C3Q9Y5Q9 886 aa22.96■■□□□ 1.27
LRCH1-204ENST00000443945 ZNF277Q9NRM2 450 aaPredicted RBP22.96■■□□□ 1.27
LRCH1-204ENST00000443945 CCDC152Q4G0S7 254 aa22.95■■□□□ 1.26
LRCH1-204ENST00000443945 TTLL11Q8NHH1 800 aa22.95■■□□□ 1.26
LRCH1-204ENST00000443945 TNNQ9UQP3 1299 aa22.95■■□□□ 1.26
LRCH1-204ENST00000443945 SNED1Q8TER0 1413 aa22.95■■□□□ 1.26
LRCH1-204ENST00000443945 GRM8O00222 908 aa22.94■■□□□ 1.26
LRCH1-204ENST00000443945 FRAT1Q92837 279 aaPredicted RBP22.94■■□□□ 1.26
LRCH1-204ENST00000443945 GREM2Q9H772 168 aa22.94■■□□□ 1.26
LRCH1-204ENST00000443945 C9orf78Q9NZ63 289 aaPredicted RBP22.94■■□□□ 1.26
LRCH1-204ENST00000443945 ATP6V0A2Q9Y487 856 aa22.94■■□□□ 1.26
LRCH1-204ENST00000443945 BBOX1O75936 387 aa22.94■■□□□ 1.26
LRCH1-204ENST00000443945 HSP90B1P14625 803 aaKnown RBP22.94■■□□□ 1.26
LRCH1-204ENST00000443945 ALDH1L1O75891 902 aa22.93■■□□□ 1.26
LRCH1-204ENST00000443945 NBPF7P0C2Y1 421 aaPredicted RBP22.93■■□□□ 1.26
LRCH1-204ENST00000443945 RTKN2Q8IZC4 609 aa22.93■■□□□ 1.26
LRCH1-204ENST00000443945 BRPF1P55201 1214 aaPredicted RBP22.93■■□□□ 1.26
LRCH1-204ENST00000443945 FKBP4Q02790 459 aaKnown RBP eCLIP22.93■■□□□ 1.26
LRCH1-204ENST00000443945 EPHA10Q5JZY3 1008 aa22.93■■□□□ 1.26
LRCH1-204ENST00000443945 MYH3P11055 1940 aa22.93■■□□□ 1.26
LRCH1-204ENST00000443945 RPS8P62241 208 aaKnown RBP22.91■■□□□ 1.26
LRCH1-204ENST00000443945 FAM161AQ3B820 660 aa22.91■■□□□ 1.26
LRCH1-204ENST00000443945 LTBP3Q9NS15 1303 aa22.91■■□□□ 1.26
LRCH1-204ENST00000443945 KIF16BQ96L93 1317 aa22.91■■□□□ 1.26
LRCH1-204ENST00000443945 SP8Q8IXZ3 490 aa22.9■■□□□ 1.26
LRCH1-204ENST00000443945 FOXO4P98177 505 aa22.89■■□□□ 1.26
LRCH1-204ENST00000443945 PLA2G12BQ9BX93 195 aa22.89■■□□□ 1.26
LRCH1-204ENST00000443945 CHMP3Q9Y3E7 222 aa22.89■■□□□ 1.26
LRCH1-204ENST00000443945 TIAM2Q8IVF5 1701 aa22.89■■□□□ 1.25
LRCH1-204ENST00000443945 CC2D2BQ6DHV5 1058 aa22.89■■□□□ 1.25
LRCH1-204ENST00000443945 CLUAP1Q96AJ1 413 aa22.89■■□□□ 1.25
LRCH1-204ENST00000443945 SUCLG2Q96I99 432 aa22.89■■□□□ 1.25
LRCH1-204ENST00000443945 API5Q9BZZ5 524 aaKnown RBP22.89■■□□□ 1.25
LRCH1-204ENST00000443945 TMX4Q9H1E5 349 aaPredicted RBP22.89■■□□□ 1.25
LRCH1-204ENST00000443945 TRIM27P14373 513 aa22.88■■□□□ 1.25
LRCH1-204ENST00000443945 DPP8Q6V1X1 898 aaPredicted RBP22.88■■□□□ 1.25
LRCH1-204ENST00000443945 PSMD1Q99460 953 aa22.88■■□□□ 1.25
LRCH1-204ENST00000443945 USP44Q9H0E7 712 aa22.88■■□□□ 1.25
LRCH1-204ENST00000443945 ITGA6P23229 1130 aa22.87■■□□□ 1.25
LRCH1-204ENST00000443945 LMBR1LQ6UX01 489 aa22.87■■□□□ 1.25
LRCH1-204ENST00000443945 MPNDQ8N594 471 aa22.87■■□□□ 1.25
LRCH1-204ENST00000443945 KAZALD1Q96I82 304 aa22.87■■□□□ 1.25
LRCH1-204ENST00000443945 NSFL1CQ9UNZ2 370 aaKnown RBP22.87■■□□□ 1.25
LRCH1-204ENST00000443945 SPEF2Q9C093 1822 aa22.87■■□□□ 1.25
LRCH1-204ENST00000443945 COL4A5P29400 1685 aa22.87■■□□□ 1.25
LRCH1-204ENST00000443945 CSF1RP07333 972 aa22.86■■□□□ 1.25
LRCH1-204ENST00000443945 ANKRD18AQ8IVF6 992 aa22.86■■□□□ 1.25
LRCH1-204ENST00000443945 LRRC37AA6NMS7 1700 aa22.86■■□□□ 1.25
LRCH1-204ENST00000443945 IARSP41252 1262 aaKnown RBP22.86■■□□□ 1.25
LRCH1-204ENST00000443945 GPSM2P81274 684 aa22.86■■□□□ 1.25
LRCH1-204ENST00000443945 GPR101Q96P66 508 aaPredicted RBP22.85■■□□□ 1.25
LRCH1-204ENST00000443945 GPBP1L1Q9HC44 474 aaPredicted RBP22.85■■□□□ 1.25
LRCH1-204ENST00000443945 DUOX1Q9NRD9 1551 aa22.85■■□□□ 1.25
LRCH1-204ENST00000443945 AOC3Q16853 763 aa22.85■■□□□ 1.25
LRCH1-204ENST00000443945 ATF7IPQ6VMQ6 1270 aa22.85■■□□□ 1.25
LRCH1-204ENST00000443945 CDC5LQ99459 802 aaKnown RBP22.85■■□□□ 1.25
LRCH1-204ENST00000443945 UTYO14607 1347 aa22.84■■□□□ 1.25
LRCH1-204ENST00000443945 DICER1Q9UPY3 1922 aaKnown RBP22.84■■□□□ 1.25
LRCH1-204ENST00000443945 CCT4P50991 539 aaKnown RBP22.84■■□□□ 1.25
LRCH1-204ENST00000443945 TMC4Q7Z404 712 aa22.84■■□□□ 1.25
LRCH1-204ENST00000443945 ARHGAP45Q92619 1136 aa22.84■■□□□ 1.25
LRCH1-204ENST00000443945 BICC1Q9H694 974 aaKnown RBP22.83■■□□□ 1.25
LRCH1-204ENST00000443945 RTL9Q8NET4 1388 aa22.83■■□□□ 1.25
LRCH1-204ENST00000443945 IPO8O15397 1037 aaKnown RBP22.83■■□□□ 1.24
LRCH1-204ENST00000443945 NMRK2Q9NPI5 230 aa22.83■■□□□ 1.24
LRCH1-204ENST00000443945 WTIPA6NIX2 430 aaPredicted RBP22.82■■□□□ 1.24
LRCH1-204ENST00000443945 PPIP5K2O43314 1243 aa22.82■■□□□ 1.24
LRCH1-204ENST00000443945 LARGE2Q8N3Y3 721 aa22.82■■□□□ 1.24
LRCH1-204ENST00000443945 ZNF594Q96JF6 807 aaPredicted RBP22.82■■□□□ 1.24
LRCH1-204ENST00000443945 POLLQ9UGP5 575 aa22.82■■□□□ 1.24
LRCH1-204ENST00000443945 ZKSCAN2Q63HK3 967 aa22.81■■□□□ 1.24
LRCH1-204ENST00000443945 ANKIB1Q9P2G1 1089 aa22.81■■□□□ 1.24
LRCH1-204ENST00000443945 C6orf229H3BNL8 230 aa22.81■■□□□ 1.24
LRCH1-204ENST00000443945 GRIPAP1Q4V328 841 aa22.81■■□□□ 1.24
LRCH1-204ENST00000443945 MEIS3Q99687 375 aa22.81■■□□□ 1.24
LRCH1-204ENST00000443945 RTFDC1Q9BY42 306 aaPredicted RBP22.81■■□□□ 1.24
LRCH1-204ENST00000443945 ANKRD18BA2A2Z9 1011 aa22.8■■□□□ 1.24
LRCH1-204ENST00000443945 IFIT5Q13325 482 aaKnown RBP22.8■■□□□ 1.24
LRCH1-204ENST00000443945 ANKRD44Q8N8A2 993 aa22.8■■□□□ 1.24
LRCH1-204ENST00000443945 ZNF541Q9H0D2 1346 aa22.8■■□□□ 1.24
LRCH1-204ENST00000443945 RIMBP2O15034 1052 aa22.8■■□□□ 1.24
LRCH1-204ENST00000443945 IGHMBP2P38935 993 aaKnown RBP22.8■■□□□ 1.24
LRCH1-204ENST00000443945 BSDC1Q9NW68 430 aaPredicted RBP22.8■■□□□ 1.24
LRCH1-204ENST00000443945 INTS3Q68E01 1043 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms