RNA–Protein interactions for RNA: ENST00000443607.2

NFKBIE-202, Transcript of NFKB inhibitor epsilon, humanhuman

TSL 3

Gene NFKBIE, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIE-202ENST00000443607 C7orf43Q8WVR3 580 aa12.64□□□□□ -0.39
NFKBIE-202ENST00000443607 RBM17Q96I25 401 aaKnown RBP12.64□□□□□ -0.39
NFKBIE-202ENST00000443607 COL11A2P13942 1736 aaPredicted RBP12.64□□□□□ -0.39
NFKBIE-202ENST00000443607 RTL9Q8NET4 1388 aa12.64□□□□□ -0.39
NFKBIE-202ENST00000443607 DDX60Q8IY21 1712 aaKnown RBP12.63□□□□□ -0.39
NFKBIE-202ENST00000443607 RABL6Q3YEC7 729 aaPredicted RBP12.63□□□□□ -0.39
NFKBIE-202ENST00000443607 PRPF40BQ6NWY9 871 aaKnown RBP12.63□□□□□ -0.39
NFKBIE-202ENST00000443607 DDX46Q7L014 1031 aaKnown RBP12.63□□□□□ -0.39
NFKBIE-202ENST00000443607 PANK1Q8TE04 598 aa12.63□□□□□ -0.39
NFKBIE-202ENST00000443607 SUCLG2Q96I99 432 aa12.63□□□□□ -0.39
NFKBIE-202ENST00000443607 MEIS3Q99687 375 aa12.63□□□□□ -0.39
NFKBIE-202ENST00000443607 WWC3Q9ULE0 1092 aa12.63□□□□□ -0.39
NFKBIE-202ENST00000443607 BCS1LQ9Y276 419 aa12.63□□□□□ -0.39
NFKBIE-202ENST00000443607 N4BP2Q86UW6 1770 aaPredicted RBP12.63□□□□□ -0.39
NFKBIE-202ENST00000443607 BRCA1P38398 1863 aaKnown RBP12.62□□□□□ -0.39
NFKBIE-202ENST00000443607 DLEC1Q9Y238 1755 aa12.62□□□□□ -0.39
NFKBIE-202ENST00000443607 BBOX1O75936 387 aa12.62□□□□□ -0.39
NFKBIE-202ENST00000443607 GRAPQ13588 217 aa12.62□□□□□ -0.39
NFKBIE-202ENST00000443607 GRAPLQ8TC17 118 aaPredicted RBP12.62□□□□□ -0.39
NFKBIE-202ENST00000443607 GREM2Q9H772 168 aa12.62□□□□□ -0.39
NFKBIE-202ENST00000443607 LAMB2P55268 1798 aa12.61□□□□□ -0.39
NFKBIE-202ENST00000443607 ZBTB7BO15156 539 aaPredicted RBP12.61□□□□□ -0.39
NFKBIE-202ENST00000443607 GRIN3BO60391 1043 aa12.61□□□□□ -0.39
NFKBIE-202ENST00000443607 GNAI3P08754 354 aa12.61□□□□□ -0.39
NFKBIE-202ENST00000443607 UBTFL1P0CB47 393 aaPredicted RBP12.61□□□□□ -0.39
NFKBIE-202ENST00000443607 RRP1P56182 461 aaKnown RBP12.61□□□□□ -0.39
NFKBIE-202ENST00000443607 GPR162Q16538 588 aa12.61□□□□□ -0.39
NFKBIE-202ENST00000443607 C20orf194Q5TEA3 1177 aa12.61□□□□□ -0.39
NFKBIE-202ENST00000443607 ANKRD44Q8N8A2 993 aa12.61□□□□□ -0.39
NFKBIE-202ENST00000443607 CELF1Q92879 486 aaKnown RBP12.61□□□□□ -0.39
NFKBIE-202ENST00000443607 SEC31BQ9NQW1 1179 aa12.61□□□□□ -0.39
NFKBIE-202ENST00000443607 HDAC5Q9UQL6 1122 aa12.61□□□□□ -0.39
NFKBIE-202ENST00000443607 RPS8P62241 208 aaKnown RBP12.6□□□□□ -0.39
NFKBIE-202ENST00000443607 FAM161AQ3B820 660 aa12.6□□□□□ -0.39
NFKBIE-202ENST00000443607 LMBR1LQ6UX01 489 aa12.6□□□□□ -0.39
NFKBIE-202ENST00000443607 TMC4Q7Z404 712 aa12.6□□□□□ -0.39
NFKBIE-202ENST00000443607 ITPRIPQ8IWB1 547 aa12.6□□□□□ -0.39
NFKBIE-202ENST00000443607 CCDC85AQ96PX6 553 aaPredicted RBP12.6□□□□□ -0.39
NFKBIE-202ENST00000443607 BICC1Q9H694 974 aaKnown RBP12.6□□□□□ -0.39
NFKBIE-202ENST00000443607 PPEF1O14829 653 aaPredicted RBP12.59□□□□□ -0.39
NFKBIE-202ENST00000443607 C21orf2O43822 256 aa12.59□□□□□ -0.39
NFKBIE-202ENST00000443607 ITGA6P23229 1130 aa12.59□□□□□ -0.39
NFKBIE-202ENST00000443607 MVPQ14764 893 aaKnown RBP12.59□□□□□ -0.39
NFKBIE-202ENST00000443607 SOGA3Q5TF21 947 aa12.59□□□□□ -0.39
NFKBIE-202ENST00000443607 CC2D2BQ6DHV5 1058 aa12.59□□□□□ -0.39
NFKBIE-202ENST00000443607 PELP1Q8IZL8 1130 aaKnown RBP12.59□□□□□ -0.39
NFKBIE-202ENST00000443607 ATP6V0A2Q9Y487 856 aa12.59□□□□□ -0.39
NFKBIE-202ENST00000443607 LRRFIP2Q9Y608 721 aaKnown RBP12.59□□□□□ -0.39
NFKBIE-202ENST00000443607 SNED1Q8TER0 1413 aa12.59□□□□□ -0.39
NFKBIE-202ENST00000443607 SLX4Q8IY92 1834 aa12.58□□□□□ -0.4
NFKBIE-202ENST00000443607 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
NFKBIE-202ENST00000443607 GNAI2P04899 355 aa12.58□□□□□ -0.4
NFKBIE-202ENST00000443607 SP8Q8IXZ3 490 aa12.58□□□□□ -0.4
NFKBIE-202ENST00000443607 CDC5LQ99459 802 aaKnown RBP12.58□□□□□ -0.4
NFKBIE-202ENST00000443607 DDX19BQ9UMR2 479 aa12.58□□□□□ -0.4
NFKBIE-202ENST00000443607 COG6Q9Y2V7 657 aa12.58□□□□□ -0.4
NFKBIE-202ENST00000443607 ANKRD18BA2A2Z9 1011 aa12.57□□□□□ -0.4
NFKBIE-202ENST00000443607 IFIT5Q13325 482 aaKnown RBP12.57□□□□□ -0.4
NFKBIE-202ENST00000443607 MTX1Q13505 466 aa12.57□□□□□ -0.4
NFKBIE-202ENST00000443607 GRIPAP1Q4V328 841 aa12.57□□□□□ -0.4
NFKBIE-202ENST00000443607 CCDC93Q567U6 631 aa12.57□□□□□ -0.4
NFKBIE-202ENST00000443607 OLFM4Q6UX06 510 aa12.57□□□□□ -0.4
NFKBIE-202ENST00000443607 SLC51AQ86UW1 340 aa12.57□□□□□ -0.4
NFKBIE-202ENST00000443607 ANKRD18AQ8IVF6 992 aa12.57□□□□□ -0.4
NFKBIE-202ENST00000443607 BSDC1Q9NW68 430 aaPredicted RBP12.57□□□□□ -0.4
NFKBIE-202ENST00000443607 COL4A1P02462 1669 aa12.57□□□□□ -0.4
NFKBIE-202ENST00000443607 NFKBIEO00221 500 aa12.56□□□□□ -0.4
NFKBIE-202ENST00000443607 RFX5P48382 616 aaPredicted RBP12.56□□□□□ -0.4
NFKBIE-202ENST00000443607 CCDC57Q2TAC2 916 aa12.56□□□□□ -0.4
NFKBIE-202ENST00000443607 ARHGAP27Q6ZUM4 889 aa12.56□□□□□ -0.4
NFKBIE-202ENST00000443607 RTKN2Q8IZC4 609 aa12.56□□□□□ -0.4
NFKBIE-202ENST00000443607 ZBTB40Q9NUA8 1239 aa12.56□□□□□ -0.4
NFKBIE-202ENST00000443607 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
NFKBIE-202ENST00000443607 CHMP3Q9Y3E7 222 aa12.56□□□□□ -0.4
NFKBIE-202ENST00000443607 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
NFKBIE-202ENST00000443607 IGHMBP2P38935 993 aaKnown RBP12.55□□□□□ -0.4
NFKBIE-202ENST00000443607 CHMP4BQ9H444 224 aaKnown RBP12.55□□□□□ -0.4
NFKBIE-202ENST00000443607 SUPT16HQ9Y5B9 1047 aaKnown RBP12.55□□□□□ -0.4
NFKBIE-202ENST00000443607 LTBP3Q9NS15 1303 aa12.55□□□□□ -0.4
NFKBIE-202ENST00000443607 MYH3P11055 1940 aa12.54□□□□□ -0.4
NFKBIE-202ENST00000443607 PSMD1Q99460 953 aa12.54□□□□□ -0.4
NFKBIE-202ENST00000443607 RTFDC1Q9BY42 306 aaPredicted RBP12.54□□□□□ -0.4
NFKBIE-202ENST00000443607 TMX4Q9H1E5 349 aaPredicted RBP12.54□□□□□ -0.4
NFKBIE-202ENST00000443607 TAOK3Q9H2K8 898 aa12.54□□□□□ -0.4
NFKBIE-202ENST00000443607 PODXL2Q9NZ53 605 aa12.54□□□□□ -0.4
NFKBIE-202ENST00000443607 MINPP1Q9UNW1 487 aa12.54□□□□□ -0.4
NFKBIE-202ENST00000443607 PRELPP51888 382 aa12.53□□□□□ -0.4
NFKBIE-202ENST00000443607 FKBP4Q02790 459 aaKnown RBP eCLIP12.53□□□□□ -0.4
NFKBIE-202ENST00000443607 PTPN12Q05209 780 aaKnown RBP12.53□□□□□ -0.4
NFKBIE-202ENST00000443607 ZNF594Q96JF6 807 aaPredicted RBP12.53□□□□□ -0.4
NFKBIE-202ENST00000443607 MPHOSPH8Q99549 860 aa12.53□□□□□ -0.4
NFKBIE-202ENST00000443607 C1orf115Q9H7X2 142 aa12.53□□□□□ -0.4
NFKBIE-202ENST00000443607 COPRSQ9NQ92 184 aa12.53□□□□□ -0.4
NFKBIE-202ENST00000443607 TAF1P21675 1872 aa12.53□□□□□ -0.4
NFKBIE-202ENST00000443607 SRGAP3O43295 1099 aa12.52□□□□□ -0.41
NFKBIE-202ENST00000443607 GPSM2P81274 684 aa12.52□□□□□ -0.41
NFKBIE-202ENST00000443607 ATP8B2P98198 1209 aa12.52□□□□□ -0.41
NFKBIE-202ENST00000443607 TAF7LQ5H9L4 462 aa12.52□□□□□ -0.41
NFKBIE-202ENST00000443607 DPP8Q6V1X1 898 aaPredicted RBP12.52□□□□□ -0.41
NFKBIE-202ENST00000443607 LDHAL6AQ6ZMR3 332 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms