RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 CELF1Q92879 486 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-212ENST00000443561 SEC31BQ9NQW1 1179 aa16.35■□□□□ 0.21
PDLIM2-212ENST00000443561 UTYO14607 1347 aa16.35■□□□□ 0.21
PDLIM2-212ENST00000443561 PDE8AO60658 829 aa16.34■□□□□ 0.21
PDLIM2-212ENST00000443561 SLC4A10Q6U841 1118 aa16.34■□□□□ 0.21
PDLIM2-212ENST00000443561 RPGRQ92834 1020 aaKnown RBP16.34■□□□□ 0.21
PDLIM2-212ENST00000443561 PLA2G12BQ9BX93 195 aa16.34■□□□□ 0.21
PDLIM2-212ENST00000443561 ALDH1L1O75891 902 aa16.33■□□□□ 0.2
PDLIM2-212ENST00000443561 TRIM27P14373 513 aa16.33■□□□□ 0.2
PDLIM2-212ENST00000443561 CTSWP56202 376 aa16.33■□□□□ 0.2
PDLIM2-212ENST00000443561 FOXO4P98177 505 aa16.33■□□□□ 0.2
PDLIM2-212ENST00000443561 ARHGAP27Q6ZUM4 889 aa16.33■□□□□ 0.2
PDLIM2-212ENST00000443561 TTLL11Q8NHH1 800 aa16.33■□□□□ 0.2
PDLIM2-212ENST00000443561 CCDC85AQ96PX6 553 aaPredicted RBP16.33■□□□□ 0.2
PDLIM2-212ENST00000443561 SRCIN1Q9C0H9 1055 aa16.33■□□□□ 0.2
PDLIM2-212ENST00000443561 GRM8O00222 908 aa16.32■□□□□ 0.2
PDLIM2-212ENST00000443561 NBPF7P0C2Y1 421 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-212ENST00000443561 GRAPQ13588 217 aa16.32■□□□□ 0.2
PDLIM2-212ENST00000443561 RTL9Q8NET4 1388 aa16.32■□□□□ 0.2
PDLIM2-212ENST00000443561 GRAPLQ8TC17 118 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-212ENST00000443561 RBM17Q96I25 401 aaKnown RBP16.32■□□□□ 0.2
PDLIM2-212ENST00000443561 SUCLG2Q96I99 432 aa16.32■□□□□ 0.2
PDLIM2-212ENST00000443561 KIF16BQ96L93 1317 aa16.32■□□□□ 0.2
PDLIM2-212ENST00000443561 LTBP3Q9NS15 1303 aa16.32■□□□□ 0.2
PDLIM2-212ENST00000443561 ZNF646O15015 1829 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-212ENST00000443561 PPEF1O14829 653 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-212ENST00000443561 CSF1RP07333 972 aa16.31■□□□□ 0.2
PDLIM2-212ENST00000443561 ALDH1B1P30837 517 aa16.31■□□□□ 0.2
PDLIM2-212ENST00000443561 USP44Q9H0E7 712 aa16.31■□□□□ 0.2
PDLIM2-212ENST00000443561 GREM2Q9H772 168 aa16.31■□□□□ 0.2
PDLIM2-212ENST00000443561 RLBP1P12271 317 aa16.3■□□□□ 0.2
PDLIM2-212ENST00000443561 ARHGAP45Q92619 1136 aa16.3■□□□□ 0.2
PDLIM2-212ENST00000443561 YTHDC1Q96MU7 727 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-212ENST00000443561 DCAF8L1A6NGE4 600 aa16.29■□□□□ 0.2
PDLIM2-212ENST00000443561 FAM161AQ3B820 660 aa16.29■□□□□ 0.2
PDLIM2-212ENST00000443561 CCDC93Q567U6 631 aa16.29■□□□□ 0.2
PDLIM2-212ENST00000443561 ANKRD44Q8N8A2 993 aa16.29■□□□□ 0.2
PDLIM2-212ENST00000443561 ATP6V0A2Q9Y487 856 aa16.29■□□□□ 0.2
PDLIM2-212ENST00000443561 YY1P25490 414 aa16.28■□□□□ 0.2
PDLIM2-212ENST00000443561 C9orf131Q5VYM1 1079 aa16.28■□□□□ 0.2
PDLIM2-212ENST00000443561 ATF7IPQ6VMQ6 1270 aa16.28■□□□□ 0.2
PDLIM2-212ENST00000443561 DDX46Q7L014 1031 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-212ENST00000443561 API5Q9BZZ5 524 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-212ENST00000443561 INTS3Q68E01 1043 aaKnown RBP16.27■□□□□ 0.2
PDLIM2-212ENST00000443561 SCN9AQ15858 1988 aa16.27■□□□□ 0.19
PDLIM2-212ENST00000443561 WTIPA6NIX2 430 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-212ENST00000443561 FKBP4Q02790 459 aaKnown RBP eCLIP16.26■□□□□ 0.19
PDLIM2-212ENST00000443561 RABL6Q3YEC7 729 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-212ENST00000443561 CCDC152Q4G0S7 254 aa16.26■□□□□ 0.19
PDLIM2-212ENST00000443561 SP8Q8IXZ3 490 aa16.26■□□□□ 0.19
PDLIM2-212ENST00000443561 FRAT1Q92837 279 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-212ENST00000443561 CLUAP1Q96AJ1 413 aa16.26■□□□□ 0.19
PDLIM2-212ENST00000443561 MEIS3Q99687 375 aa16.26■□□□□ 0.19
PDLIM2-212ENST00000443561 TAOK3Q9H2K8 898 aa16.26■□□□□ 0.19
PDLIM2-212ENST00000443561 RNF181Q9P0P0 153 aa16.26■□□□□ 0.19
PDLIM2-212ENST00000443561 PSME4Q14997 1843 aa16.25■□□□□ 0.19
PDLIM2-212ENST00000443561 BBOX1O75936 387 aa16.25■□□□□ 0.19
PDLIM2-212ENST00000443561 RPS8P62241 208 aaKnown RBP16.25■□□□□ 0.19
PDLIM2-212ENST00000443561 TMEM57Q8N5G2 664 aa16.25■□□□□ 0.19
PDLIM2-212ENST00000443561 PSMD1Q99460 953 aa16.25■□□□□ 0.19
PDLIM2-212ENST00000443561 BICC1Q9H694 974 aaKnown RBP16.25■□□□□ 0.19
PDLIM2-212ENST00000443561 ZNF277Q9NRM2 450 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-212ENST00000443561 LMNB1P20700 586 aa16.24■□□□□ 0.19
PDLIM2-212ENST00000443561 ITGA6P23229 1130 aa16.24■□□□□ 0.19
PDLIM2-212ENST00000443561 CCT4P50991 539 aaKnown RBP16.24■□□□□ 0.19
PDLIM2-212ENST00000443561 GPSM2P81274 684 aa16.24■□□□□ 0.19
PDLIM2-212ENST00000443561 ZKSCAN2Q63HK3 967 aa16.24■□□□□ 0.19
PDLIM2-212ENST00000443561 LMBR1LQ6UX01 489 aa16.24■□□□□ 0.19
PDLIM2-212ENST00000443561 RTFDC1Q9BY42 306 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-212ENST00000443561 C9orf78Q9NZ63 289 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-212ENST00000443561 RCAN3Q9UKA8 241 aa16.24■□□□□ 0.19
PDLIM2-212ENST00000443561 SOGA3Q5TF21 947 aa16.23■□□□□ 0.19
PDLIM2-212ENST00000443561 ZNF784Q8NCA9 323 aaPredicted RBP16.23■□□□□ 0.19
PDLIM2-212ENST00000443561 GPR101Q96P66 508 aaPredicted RBP16.23■□□□□ 0.19
PDLIM2-212ENST00000443561 WDR90Q96KV7 1748 aa16.22■□□□□ 0.19
PDLIM2-212ENST00000443561 PLIN1O60240 522 aa16.22■□□□□ 0.19
PDLIM2-212ENST00000443561 CC2D2BQ6DHV5 1058 aa16.22■□□□□ 0.19
PDLIM2-212ENST00000443561 RTKN2Q8IZC4 609 aa16.22■□□□□ 0.19
PDLIM2-212ENST00000443561 ZNF594Q96JF6 807 aaPredicted RBP16.22■□□□□ 0.19
PDLIM2-212ENST00000443561 POLLQ9UGP5 575 aa16.22■□□□□ 0.19
PDLIM2-212ENST00000443561 HSP90B1P14625 803 aaKnown RBP16.21■□□□□ 0.19
PDLIM2-212ENST00000443561 RFX5P48382 616 aaPredicted RBP16.21■□□□□ 0.19
PDLIM2-212ENST00000443561 ZNF541Q9H0D2 1346 aa16.2■□□□□ 0.18
PDLIM2-212ENST00000443561 IRS2Q9Y4H2 1338 aa16.2■□□□□ 0.18
PDLIM2-212ENST00000443561 IPO8O15397 1037 aaKnown RBP16.2■□□□□ 0.18
PDLIM2-212ENST00000443561 IARSP41252 1262 aaKnown RBP16.2■□□□□ 0.18
PDLIM2-212ENST00000443561 C20orf194Q5TEA3 1177 aa16.2■□□□□ 0.18
PDLIM2-212ENST00000443561 TMC4Q7Z404 712 aa16.2■□□□□ 0.18
PDLIM2-212ENST00000443561 ANKRD18AQ8IVF6 992 aa16.2■□□□□ 0.18
PDLIM2-212ENST00000443561 PANK1Q8TE04 598 aa16.2■□□□□ 0.18
PDLIM2-212ENST00000443561 PODXL2Q9NZ53 605 aa16.2■□□□□ 0.18
PDLIM2-212ENST00000443561 MINPP1Q9UNW1 487 aa16.2■□□□□ 0.18
PDLIM2-212ENST00000443561 LRRFIP2Q9Y608 721 aaKnown RBP16.2■□□□□ 0.18
PDLIM2-212ENST00000443561 SNAP23O00161 211 aa16.19■□□□□ 0.18
PDLIM2-212ENST00000443561 AOC3Q16853 763 aa16.19■□□□□ 0.18
PDLIM2-212ENST00000443561 MPNDQ8N594 471 aa16.19■□□□□ 0.18
PDLIM2-212ENST00000443561 CDC5LQ99459 802 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-212ENST00000443561 PUS3Q9BZE2 481 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-212ENST00000443561 BSDC1Q9NW68 430 aaPredicted RBP16.19■□□□□ 0.18
PDLIM2-212ENST00000443561 DPP8Q6V1X1 898 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms