RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 RTKN2Q8IZC4 609 aa19.06■□□□□ 0.64
CSNK1E-210ENST00000442216 GRAPLQ8TC17 118 aaPredicted RBP19.06■□□□□ 0.64
CSNK1E-210ENST00000442216 PPEF1O14829 653 aaPredicted RBP19.05■□□□□ 0.64
CSNK1E-210ENST00000442216 CCDC152Q4G0S7 254 aa19.05■□□□□ 0.64
CSNK1E-210ENST00000442216 UBE3BQ7Z3V4 1068 aa19.05■□□□□ 0.64
CSNK1E-210ENST00000442216 API5Q9BZZ5 524 aaKnown RBP19.05■□□□□ 0.64
CSNK1E-210ENST00000442216 ZNF219Q9P2Y4 722 aaPredicted RBP19.05■□□□□ 0.64
CSNK1E-210ENST00000442216 NOB1Q9ULX3 412 aaKnown RBP19.05■□□□□ 0.64
CSNK1E-210ENST00000442216 LRRC37AA6NMS7 1700 aa19.05■□□□□ 0.64
CSNK1E-210ENST00000442216 NFKBIEO00221 500 aa19.04■□□□□ 0.64
CSNK1E-210ENST00000442216 SNED1Q8TER0 1413 aa19.04■□□□□ 0.64
CSNK1E-210ENST00000442216 JARID2Q92833 1246 aaPredicted RBP19.04■□□□□ 0.64
CSNK1E-210ENST00000442216 GRM8O00222 908 aa19.03■□□□□ 0.64
CSNK1E-210ENST00000442216 LMNB1P20700 586 aa19.03■□□□□ 0.64
CSNK1E-210ENST00000442216 CTSWP56202 376 aa19.03■□□□□ 0.64
CSNK1E-210ENST00000442216 SP8Q8IXZ3 490 aa19.03■□□□□ 0.64
CSNK1E-210ENST00000442216 TMX4Q9H1E5 349 aaPredicted RBP19.03■□□□□ 0.64
CSNK1E-210ENST00000442216 TAOK3Q9H2K8 898 aa19.03■□□□□ 0.64
CSNK1E-210ENST00000442216 ATP6V0A2Q9Y487 856 aa19.03■□□□□ 0.64
CSNK1E-210ENST00000442216 RTL9Q8NET4 1388 aa19.03■□□□□ 0.64
CSNK1E-210ENST00000442216 IPO8O15397 1037 aaKnown RBP19.02■□□□□ 0.64
CSNK1E-210ENST00000442216 RASSF7Q02833 373 aa19.02■□□□□ 0.64
CSNK1E-210ENST00000442216 TTLL11Q8NHH1 800 aa19.02■□□□□ 0.64
CSNK1E-210ENST00000442216 C9orf78Q9NZ63 289 aaPredicted RBP19.02■□□□□ 0.64
CSNK1E-210ENST00000442216 UTYO14607 1347 aa19.01■□□□□ 0.63
CSNK1E-210ENST00000442216 ZC3H4Q9UPT8 1303 aaKnown RBP19.01■□□□□ 0.63
CSNK1E-210ENST00000442216 TIAM2Q8IVF5 1701 aa19.01■□□□□ 0.63
CSNK1E-210ENST00000442216 FKBP4Q02790 459 aaKnown RBP eCLIP19.01■□□□□ 0.63
CSNK1E-210ENST00000442216 C9orf131Q5VYM1 1079 aa19.01■□□□□ 0.63
CSNK1E-210ENST00000442216 PSMD1Q99460 953 aa19.01■□□□□ 0.63
CSNK1E-210ENST00000442216 UTRNP46939 3433 aa19■□□□□ 0.63
CSNK1E-210ENST00000442216 CSF1RP07333 972 aa19■□□□□ 0.63
CSNK1E-210ENST00000442216 CCT4P50991 539 aaKnown RBP19■□□□□ 0.63
CSNK1E-210ENST00000442216 RPS8P62241 208 aaKnown RBP19■□□□□ 0.63
CSNK1E-210ENST00000442216 RNF181Q9P0P0 153 aa19■□□□□ 0.63
CSNK1E-210ENST00000442216 BCAR3O75815 825 aa18.99■□□□□ 0.63
CSNK1E-210ENST00000442216 OLFM4Q6UX06 510 aa18.99■□□□□ 0.63
CSNK1E-210ENST00000442216 CELF1Q92879 486 aaKnown RBP18.99■□□□□ 0.63
CSNK1E-210ENST00000442216 SPEF2Q9C093 1822 aa18.98■□□□□ 0.63
CSNK1E-210ENST00000442216 PRELPP51888 382 aa18.98■□□□□ 0.63
CSNK1E-210ENST00000442216 CDC5LQ99459 802 aaKnown RBP18.98■□□□□ 0.63
CSNK1E-210ENST00000442216 COL4A1P02462 1669 aa18.98■□□□□ 0.63
CSNK1E-210ENST00000442216 ATF7IPQ6VMQ6 1270 aa18.97■□□□□ 0.63
CSNK1E-210ENST00000442216 VPS33BQ9H267 617 aa18.97■□□□□ 0.63
CSNK1E-210ENST00000442216 GREM2Q9H772 168 aa18.97■□□□□ 0.63
CSNK1E-210ENST00000442216 SEC31BQ9NQW1 1179 aa18.97■□□□□ 0.63
CSNK1E-210ENST00000442216 FOXO4P98177 505 aa18.96■□□□□ 0.63
CSNK1E-210ENST00000442216 ANKRD18AQ8IVF6 992 aa18.96■□□□□ 0.63
CSNK1E-210ENST00000442216 ZNF784Q8NCA9 323 aaPredicted RBP18.96■□□□□ 0.63
CSNK1E-210ENST00000442216 SUPT20HQ8NEM7 779 aa18.96■□□□□ 0.63
CSNK1E-210ENST00000442216 RTFDC1Q9BY42 306 aaPredicted RBP18.96■□□□□ 0.63
CSNK1E-210ENST00000442216 USP44Q9H0E7 712 aa18.96■□□□□ 0.63
CSNK1E-210ENST00000442216 LTBP1Q14766 1721 aa18.96■□□□□ 0.63
CSNK1E-210ENST00000442216 NBPF7P0C2Y1 421 aaPredicted RBP18.95■□□□□ 0.62
CSNK1E-210ENST00000442216 TRIM27P14373 513 aa18.95■□□□□ 0.62
CSNK1E-210ENST00000442216 ZKSCAN2Q63HK3 967 aa18.95■□□□□ 0.62
CSNK1E-210ENST00000442216 INTS3Q68E01 1043 aaKnown RBP18.95■□□□□ 0.62
CSNK1E-210ENST00000442216 MPNDQ8N594 471 aa18.95■□□□□ 0.62
CSNK1E-210ENST00000442216 CCDC85AQ96PX6 553 aaPredicted RBP18.95■□□□□ 0.62
CSNK1E-210ENST00000442216 IARSP41252 1262 aaKnown RBP18.94■□□□□ 0.62
CSNK1E-210ENST00000442216 FRAT1Q92837 279 aaPredicted RBP18.94■□□□□ 0.62
CSNK1E-210ENST00000442216 BSDC1Q9NW68 430 aaPredicted RBP18.94■□□□□ 0.62
CSNK1E-210ENST00000442216 HDAC5Q9UQL6 1122 aa18.94■□□□□ 0.62
CSNK1E-210ENST00000442216 ITGA6P23229 1130 aa18.93■□□□□ 0.62
CSNK1E-210ENST00000442216 DPP8Q6V1X1 898 aaPredicted RBP18.93■□□□□ 0.62
CSNK1E-210ENST00000442216 SUCLG2Q96I99 432 aa18.93■□□□□ 0.62
CSNK1E-210ENST00000442216 ZNF277Q9NRM2 450 aaPredicted RBP18.93■□□□□ 0.62
CSNK1E-210ENST00000442216 DUOX1Q9NRD9 1551 aa18.93■□□□□ 0.62
CSNK1E-210ENST00000442216 ANKRD18BA2A2Z9 1011 aa18.92■□□□□ 0.62
CSNK1E-210ENST00000442216 IGHMBP2P38935 993 aaKnown RBP18.92■□□□□ 0.62
CSNK1E-210ENST00000442216 FAM161AQ3B820 660 aa18.92■□□□□ 0.62
CSNK1E-210ENST00000442216 EPHA10Q5JZY3 1008 aa18.92■□□□□ 0.62
CSNK1E-210ENST00000442216 LMBR1LQ6UX01 489 aa18.92■□□□□ 0.62
CSNK1E-210ENST00000442216 KAZALD1Q96I82 304 aa18.92■□□□□ 0.62
CSNK1E-210ENST00000442216 PODXL2Q9NZ53 605 aa18.92■□□□□ 0.62
CSNK1E-210ENST00000442216 IFIT5Q13325 482 aaKnown RBP18.91■□□□□ 0.62
CSNK1E-210ENST00000442216 RABL6Q3YEC7 729 aaPredicted RBP18.91■□□□□ 0.62
CSNK1E-210ENST00000442216 SLC51AQ86UW1 340 aa18.91■□□□□ 0.62
CSNK1E-210ENST00000442216 NSFL1CQ9UNZ2 370 aaKnown RBP18.91■□□□□ 0.62
CSNK1E-210ENST00000442216 CCDC57Q2TAC2 916 aa18.9■□□□□ 0.62
CSNK1E-210ENST00000442216 JDP2Q8WYK2 163 aa18.9■□□□□ 0.62
CSNK1E-210ENST00000442216 A0A1B0GUL6 1792 aa18.89■□□□□ 0.61
CSNK1E-210ENST00000442216 GLTPD2A6NH11 291 aa18.89■□□□□ 0.61
CSNK1E-210ENST00000442216 UBTFL1P0CB47 393 aaPredicted RBP18.89■□□□□ 0.61
CSNK1E-210ENST00000442216 GPSM2P81274 684 aa18.89■□□□□ 0.61
CSNK1E-210ENST00000442216 DPY19L2Q6NUT2 758 aa18.89■□□□□ 0.61
CSNK1E-210ENST00000442216 MPHOSPH8Q99549 860 aa18.89■□□□□ 0.61
CSNK1E-210ENST00000442216 BICC1Q9H694 974 aaKnown RBP18.89■□□□□ 0.61
CSNK1E-210ENST00000442216 GPBP1L1Q9HC44 474 aaPredicted RBP18.89■□□□□ 0.61
CSNK1E-210ENST00000442216 RCAN3Q9UKA8 241 aa18.89■□□□□ 0.61
CSNK1E-210ENST00000442216 CHMP3Q9Y3E7 222 aa18.89■□□□□ 0.61
CSNK1E-210ENST00000442216 KDM2BQ8NHM5 1336 aa18.89■□□□□ 0.61
CSNK1E-210ENST00000442216 PPIP5K2O43314 1243 aa18.88■□□□□ 0.61
CSNK1E-210ENST00000442216 GNAI3P08754 354 aa18.88■□□□□ 0.61
CSNK1E-210ENST00000442216 KIAA2012Q0VF49 1180 aa18.88■□□□□ 0.61
CSNK1E-210ENST00000442216 LARGE2Q8N3Y3 721 aa18.88■□□□□ 0.61
CSNK1E-210ENST00000442216 EYA3Q99504 573 aa18.88■□□□□ 0.61
CSNK1E-210ENST00000442216 MINPP1Q9UNW1 487 aa18.88■□□□□ 0.61
CSNK1E-210ENST00000442216 XDHP47989 1333 aa18.88■□□□□ 0.61
CSNK1E-210ENST00000442216 WDR90Q96KV7 1748 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms