RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 PHAXQ9H814 394 aaKnown RBP11.2□□□□□ -0.62
HDAC6-209ENST00000440653 UTYO14607 1347 aa11.19□□□□□ -0.62
HDAC6-209ENST00000440653 PI4KAP2A4QPH2 592 aa11.19□□□□□ -0.62
HDAC6-209ENST00000440653 NFKBIEO00221 500 aa11.19□□□□□ -0.62
HDAC6-209ENST00000440653 DDNO94850 711 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-209ENST00000440653 PDE1AP54750 535 aa11.19□□□□□ -0.62
HDAC6-209ENST00000440653 RABEP1Q15276 862 aa11.19□□□□□ -0.62
HDAC6-209ENST00000440653 TRAPPC3LQ5T215 181 aa11.19□□□□□ -0.62
HDAC6-209ENST00000440653 PI4KAP1Q8N8J0 262 aa11.19□□□□□ -0.62
HDAC6-209ENST00000440653 LINS1Q8NG48 757 aa11.19□□□□□ -0.62
HDAC6-209ENST00000440653 PIGBQ92521 554 aa11.19□□□□□ -0.62
HDAC6-209ENST00000440653 ARHGEF1Q92888 912 aaKnown RBP11.19□□□□□ -0.62
HDAC6-209ENST00000440653 SMARCC1Q92922 1105 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-209ENST00000440653 KIF1BPQ96EK5 621 aa11.19□□□□□ -0.62
HDAC6-209ENST00000440653 ZNF219Q9P2Y4 722 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-209ENST00000440653 STAP2Q9UGK3 403 aa11.19□□□□□ -0.62
HDAC6-209ENST00000440653 CIZ1Q9ULV3 898 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-209ENST00000440653 ITGB4P16144 1822 aa11.19□□□□□ -0.62
HDAC6-209ENST00000440653 ANKRD36CQ5JPF3 1778 aa11.18□□□□□ -0.62
HDAC6-209ENST00000440653 USP42Q9H9J4 1324 aaKnown RBP11.18□□□□□ -0.62
HDAC6-209ENST00000440653 SNRPA1P09661 255 aaKnown RBP11.18□□□□□ -0.62
HDAC6-209ENST00000440653 NEXNQ0ZGT2 675 aa11.18□□□□□ -0.62
HDAC6-209ENST00000440653 BEGAINQ9BUH8 593 aa11.18□□□□□ -0.62
HDAC6-209ENST00000440653 EXOC6BQ9Y2D4 811 aa11.18□□□□□ -0.62
HDAC6-209ENST00000440653 TTC41PQ6P2S7 1318 aa11.17□□□□□ -0.62
HDAC6-209ENST00000440653 PNMA6EA0A0J9YXQ4 647 aa11.17□□□□□ -0.62
HDAC6-209ENST00000440653 ERVV-2B6SEH9 535 aa11.17□□□□□ -0.62
HDAC6-209ENST00000440653 DLL1O00548 723 aa11.17□□□□□ -0.62
HDAC6-209ENST00000440653 KCNQ3O43525 872 aa11.17□□□□□ -0.62
HDAC6-209ENST00000440653 SDSP20132 328 aa11.17□□□□□ -0.62
HDAC6-209ENST00000440653 DDR1Q08345 913 aa11.17□□□□□ -0.62
HDAC6-209ENST00000440653 GRM1Q13255 1194 aa11.17□□□□□ -0.62
HDAC6-209ENST00000440653 NFKBIBQ15653 356 aa11.17□□□□□ -0.62
HDAC6-209ENST00000440653 HABP4Q5JVS0 413 aaKnown RBP11.17□□□□□ -0.62
HDAC6-209ENST00000440653 LDHDQ86WU2 507 aa11.17□□□□□ -0.62
HDAC6-209ENST00000440653 ANTXR1Q9H6X2 564 aa11.17□□□□□ -0.62
HDAC6-209ENST00000440653 MAP3K2Q9Y2U5 619 aa11.17□□□□□ -0.62
HDAC6-209ENST00000440653 LTBP1Q14766 1721 aa11.17□□□□□ -0.62
HDAC6-209ENST00000440653 ERC2O15083 957 aa11.16□□□□□ -0.62
HDAC6-209ENST00000440653 CYP27B1O15528 508 aa11.16□□□□□ -0.62
HDAC6-209ENST00000440653 SRGAP3O43295 1099 aa11.16□□□□□ -0.62
HDAC6-209ENST00000440653 MCCP23508 829 aa11.16□□□□□ -0.62
HDAC6-209ENST00000440653 ATP6V1AP38606 617 aa11.16□□□□□ -0.62
HDAC6-209ENST00000440653 NKX1-1Q15270 411 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-209ENST00000440653 PPP1R42Q7Z4L9 355 aa11.16□□□□□ -0.62
HDAC6-209ENST00000440653 GPATCH3Q96I76 525 aa11.16□□□□□ -0.62
HDAC6-209ENST00000440653 C9orf78Q9NZ63 289 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-209ENST00000440653 ABT1Q9ULW3 272 aaKnown RBP11.16□□□□□ -0.62
HDAC6-209ENST00000440653 RTCBQ9Y3I0 505 aaKnown RBP11.16□□□□□ -0.62
HDAC6-209ENST00000440653 GRM8O00222 908 aa11.15□□□□□ -0.62
HDAC6-209ENST00000440653 SLC4A3P48751 1232 aa11.15□□□□□ -0.62
HDAC6-209ENST00000440653 CABP4P57796 275 aa11.15□□□□□ -0.62
HDAC6-209ENST00000440653 CYP4F22Q6NT55 531 aa11.15□□□□□ -0.62
HDAC6-209ENST00000440653 CAPNS2Q96L46 248 aa11.15□□□□□ -0.62
HDAC6-209ENST00000440653 GPR101Q96P66 508 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-209ENST00000440653 CHMP5Q9NZZ3 219 aa11.15□□□□□ -0.62
HDAC6-209ENST00000440653 ASAP1Q9ULH1 1129 aa11.15□□□□□ -0.62
HDAC6-209ENST00000440653 THSD7BQ9C0I4 1608 aa11.15□□□□□ -0.62
HDAC6-209ENST00000440653 SPEF2Q9C093 1822 aa11.14□□□□□ -0.63
HDAC6-209ENST00000440653 SMARCA5O60264 1052 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-209ENST00000440653 AOC2O75106 756 aa11.14□□□□□ -0.63
HDAC6-209ENST00000440653 PTMSP20962 102 aa11.14□□□□□ -0.63
HDAC6-209ENST00000440653 ERFEQ4G0M1 354 aa11.14□□□□□ -0.63
HDAC6-209ENST00000440653 PAXIP1Q6ZW49 1069 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-209ENST00000440653 RHPN1Q8TCX5 695 aa11.14□□□□□ -0.63
HDAC6-209ENST00000440653 OTUD7AQ8TE49 926 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-209ENST00000440653 TAF1DQ9H5J8 278 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-209ENST00000440653 K7ELQ4 463 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-209ENST00000440653 APBB1O00213 710 aa11.13□□□□□ -0.63
HDAC6-209ENST00000440653 ST18O60284 1047 aa11.13□□□□□ -0.63
HDAC6-209ENST00000440653 SURF6O75683 361 aaKnown RBP11.13□□□□□ -0.63
HDAC6-209ENST00000440653 NBPF7P0C2Y1 421 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-209ENST00000440653 RFC4P35249 363 aa11.13□□□□□ -0.63
HDAC6-209ENST00000440653 ANAPC15P60006 121 aa11.13□□□□□ -0.63
HDAC6-209ENST00000440653 FMR1Q06787 632 aaKnown RBP eCLIP11.13□□□□□ -0.63
HDAC6-209ENST00000440653 PDIA6Q15084 440 aa11.13□□□□□ -0.63
HDAC6-209ENST00000440653 PROSER3Q2NL68 480 aa11.13□□□□□ -0.63
HDAC6-209ENST00000440653 EAPPQ56P03 285 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-209ENST00000440653 NFATC2IPQ8NCF5 419 aa11.13□□□□□ -0.63
HDAC6-209ENST00000440653 ZNF496Q96IT1 587 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-209ENST00000440653 METTL22Q9BUU2 404 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-209ENST00000440653 SLKQ9H2G2 1235 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-209ENST00000440653 SRP68Q9UHB9 627 aaKnown RBP11.13□□□□□ -0.63
HDAC6-209ENST00000440653 CLEC11AQ9Y240 323 aa11.13□□□□□ -0.63
HDAC6-209ENST00000440653 RFX7Q2KHR2 1363 aa11.13□□□□□ -0.63
HDAC6-209ENST00000440653 GLRX3O76003 335 aaKnown RBP11.12□□□□□ -0.63
HDAC6-209ENST00000440653 OS9Q13438 667 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-209ENST00000440653 MAP1SQ66K74 1059 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-209ENST00000440653 RIC3Q7Z5B4 369 aa11.12□□□□□ -0.63
HDAC6-209ENST00000440653 CNTROBQ8N137 903 aa11.12□□□□□ -0.63
HDAC6-209ENST00000440653 IL17RAQ96F46 866 aa11.12□□□□□ -0.63
HDAC6-209ENST00000440653 KIF2CQ99661 725 aa11.12□□□□□ -0.63
HDAC6-209ENST00000440653 DICER1Q9UPY3 1922 aaKnown RBP11.11□□□□□ -0.63
HDAC6-209ENST00000440653 ZNF831Q5JPB2 1677 aa11.11□□□□□ -0.63
HDAC6-209ENST00000440653 DDX11L8A8MPP1 907 aa11.11□□□□□ -0.63
HDAC6-209ENST00000440653 NEURL1BA8MQ27 555 aa11.11□□□□□ -0.63
HDAC6-209ENST00000440653 ANXA1P04083 346 aa11.11□□□□□ -0.63
HDAC6-209ENST00000440653 MCM2P49736 904 aa11.11□□□□□ -0.63
HDAC6-209ENST00000440653 CLASRPQ8N2M8 674 aaKnown RBP11.11□□□□□ -0.63
HDAC6-209ENST00000440653 SLC4A9Q96Q91 983 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms