RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 ERFEQ4G0M1 354 aa34.5■■■■□ 3.11
CGREF1-207ENST00000440612 CCDC85AQ96PX6 553 aaPredicted RBP34.5■■■■□ 3.11
CGREF1-207ENST00000440612 BCL11AQ9H165 835 aa34.5■■■■□ 3.11
CGREF1-207ENST00000440612 TFCP2L1Q9NZI6 479 aa34.5■■■■□ 3.11
CGREF1-207ENST00000440612 C8orf34Q49A92 452 aa34.49■■■■□ 3.11
CGREF1-207ENST00000440612 ATG9AQ7Z3C6 839 aa34.49■■■■□ 3.11
CGREF1-207ENST00000440612 ZNF594Q96JF6 807 aaPredicted RBP34.49■■■■□ 3.11
CGREF1-207ENST00000440612 OSBPL3Q9H4L5 887 aa34.48■■■■□ 3.11
CGREF1-207ENST00000440612 SLC10A5Q5PT55 438 aa34.47■■■■□ 3.11
CGREF1-207ENST00000440612 BACH2Q9BYV9 841 aa34.47■■■■□ 3.11
CGREF1-207ENST00000440612 CCDC57Q2TAC2 916 aa34.47■■■■□ 3.11
CGREF1-207ENST00000440612 COL23A1Q86Y22 540 aaPredicted RBP34.47■■■■□ 3.11
CGREF1-207ENST00000440612 ABCC12Q96J65 1359 aa34.47■■■■□ 3.11
CGREF1-207ENST00000440612 PDE1AP54750 535 aa34.46■■■■□ 3.11
CGREF1-207ENST00000440612 ANO8Q9HCE9 1232 aaPredicted RBP34.45■■■■□ 3.11
CGREF1-207ENST00000440612 STAP2Q9UGK3 403 aa34.45■■■■□ 3.11
CGREF1-207ENST00000440612 ITGA6P23229 1130 aa34.44■■■■□ 3.1
CGREF1-207ENST00000440612 IFIT5Q13325 482 aaKnown RBP34.44■■■■□ 3.1
CGREF1-207ENST00000440612 BMP2KLQ5H9B9 411 aa34.44■■■■□ 3.1
CGREF1-207ENST00000440612 NYXQ9GZU5 481 aa34.44■■■■□ 3.1
CGREF1-207ENST00000440612 EYA2O00167 538 aa34.44■■■■□ 3.1
CGREF1-207ENST00000440612 CIAO1O76071 339 aa34.44■■■■□ 3.1
CGREF1-207ENST00000440612 GSPT1P15170 499 aaKnown RBP34.44■■■■□ 3.1
CGREF1-207ENST00000440612 TM4SF1P30408 202 aa34.44■■■■□ 3.1
CGREF1-207ENST00000440612 LRRC24Q50LG9 513 aa34.44■■■■□ 3.1
CGREF1-207ENST00000440612 C3orf67Q6ZVT6 689 aa34.44■■■■□ 3.1
CGREF1-207ENST00000440612 PUS3Q9BZE2 481 aaKnown RBP34.44■■■■□ 3.1
CGREF1-207ENST00000440612 PNPLA7Q6ZV29 1317 aa34.43■■■■□ 3.1
CGREF1-207ENST00000440612 CARMIL3Q8ND23 1372 aa34.43■■■■□ 3.1
CGREF1-207ENST00000440612 DEFB132Q7Z7B7 95 aa34.43■■■■□ 3.1
CGREF1-207ENST00000440612 NBPF5PQ86XG9 351 aaPredicted RBP34.43■■■■□ 3.1
CGREF1-207ENST00000440612 RTL9Q8NET4 1388 aa34.42■■■■□ 3.1
CGREF1-207ENST00000440612 MX1P20591 662 aa34.42■■■■□ 3.1
CGREF1-207ENST00000440612 HSP90B1P14625 803 aaKnown RBP34.41■■■■□ 3.1
CGREF1-207ENST00000440612 TTC22Q5TAA0 569 aa34.41■■■■□ 3.1
CGREF1-207ENST00000440612 CLASRPQ8N2M8 674 aaKnown RBP34.41■■■■□ 3.1
CGREF1-207ENST00000440612 EAF2Q96CJ1 260 aaPredicted RBP34.41■■■■□ 3.1
CGREF1-207ENST00000440612 TFCP2Q12800 502 aa34.41■■■■□ 3.1
CGREF1-207ENST00000440612 FBXO3Q9UK99 471 aa34.41■■■■□ 3.1
CGREF1-207ENST00000440612 LRP5O75197 1615 aa34.4■■■■□ 3.1
CGREF1-207ENST00000440612 IL15P40933 162 aaPredicted RBP34.4■■■■□ 3.1
CGREF1-207ENST00000440612 BAG6P46379 1132 aa34.4■■■■□ 3.1
CGREF1-207ENST00000440612 TSHZ3Q63HK5 1081 aa34.4■■■■□ 3.1
CGREF1-207ENST00000440612 TPTE2Q6XPS3 522 aa34.4■■■■□ 3.1
CGREF1-207ENST00000440612 FLAD1Q8NFF5 587 aa34.4■■■■□ 3.1
CGREF1-207ENST00000440612 ANKRD18BA2A2Z9 1011 aa34.39■■■■□ 3.1
CGREF1-207ENST00000440612 SF3B3Q15393 1217 aaKnown RBP34.38■■■■□ 3.09
CGREF1-207ENST00000440612 SF3B2Q13435 895 aaKnown RBP34.38■■■■□ 3.09
CGREF1-207ENST00000440612 SLC15A2Q16348 729 aa34.38■■■■□ 3.09
CGREF1-207ENST00000440612 DDR1Q08345 913 aa34.37■■■■□ 3.09
CGREF1-207ENST00000440612 CCDC152Q4G0S7 254 aa34.37■■■■□ 3.09
CGREF1-207ENST00000440612 SEC31BQ9NQW1 1179 aa34.37■■■■□ 3.09
CGREF1-207ENST00000440612 AACSQ86V21 672 aa34.36■■■■□ 3.09
CGREF1-207ENST00000440612 RIPOR2Q9Y4F9 1068 aa34.36■■■■□ 3.09
CGREF1-207ENST00000440612 COL4A1P02462 1669 aa34.35■■■■□ 3.09
CGREF1-207ENST00000440612 AOX1Q06278 1338 aa34.35■■■■□ 3.09
CGREF1-207ENST00000440612 CCDC24Q8N4L8 307 aa34.35■■■■□ 3.09
CGREF1-207ENST00000440612 GTF2E1P29083 439 aaPredicted RBP34.35■■■■□ 3.09
CGREF1-207ENST00000440612 TNNI3KQ59H18 835 aa34.35■■■■□ 3.09
CGREF1-207ENST00000440612 FPGT-TNNI3KV9GXZ4 949 aa34.35■■■■□ 3.09
CGREF1-207ENST00000440612 PI4K2BQ8TCG2 481 aa34.34■■■■□ 3.09
CGREF1-207ENST00000440612 TLR7Q9NYK1 1049 aaKnown RBP34.34■■■■□ 3.09
CGREF1-207ENST00000440612 CASZ1Q86V15 1759 aa34.34■■■■□ 3.09
CGREF1-207ENST00000440612 RIC1Q4ADV7 1423 aa34.33■■■■□ 3.09
CGREF1-207ENST00000440612 POLRMTO00411 1230 aaKnown RBP34.33■■■■□ 3.09
CGREF1-207ENST00000440612 TAF7LQ5H9L4 462 aa34.33■■■■□ 3.09
CGREF1-207ENST00000440612 PRR5LQ6MZQ0 368 aa34.33■■■■□ 3.09
CGREF1-207ENST00000440612 GPR108Q9NPR9 543 aa34.32■■■■□ 3.08
CGREF1-207ENST00000440612 TNRC6CQ9HCJ0 1690 aaKnown RBP34.32■■■■□ 3.08
CGREF1-207ENST00000440612 LDHAL6AQ6ZMR3 332 aa34.31■■■■□ 3.08
CGREF1-207ENST00000440612 CCDC8Q9H0W5 538 aaPredicted RBP34.31■■■■□ 3.08
CGREF1-207ENST00000440612 SERPINB2P05120 415 aa34.31■■■■□ 3.08
CGREF1-207ENST00000440612 IFIT2P09913 472 aaKnown RBP34.31■■■■□ 3.08
CGREF1-207ENST00000440612 CCDC125Q86Z20 511 aa34.31■■■■□ 3.08
CGREF1-207ENST00000440612 NLGN1Q8N2Q7 840 aa34.31■■■■□ 3.08
CGREF1-207ENST00000440612 CNBD1Q8NA66 436 aa34.31■■■■□ 3.08
CGREF1-207ENST00000440612 QSER1Q2KHR3 1735 aa34.3■■■■□ 3.08
CGREF1-207ENST00000440612 STK32BQ9NY57 414 aa34.3■■■■□ 3.08
CGREF1-207ENST00000440612 TTC41PQ6P2S7 1318 aa34.29■■■■□ 3.08
CGREF1-207ENST00000440612 SDSP20132 328 aa34.29■■■■□ 3.08
CGREF1-207ENST00000440612 MSH5O43196 834 aa34.28■■■■□ 3.08
CGREF1-207ENST00000440612 NLRP3Q96P20 1036 aa34.28■■■■□ 3.08
CGREF1-207ENST00000440612 DBNLQ9UJU6 430 aaKnown RBP34.28■■■■□ 3.08
CGREF1-207ENST00000440612 VGLL2Q8N8G2 317 aa34.28■■■■□ 3.08
CGREF1-207ENST00000440612 ECHDC1Q9NTX5 307 aa34.28■■■■□ 3.08
CGREF1-207ENST00000440612 ZNF609O15014 1411 aa34.27■■■■□ 3.08
CGREF1-207ENST00000440612 CEP126Q9P2H0 1117 aa34.26■■■■□ 3.08
CGREF1-207ENST00000440612 SEC24BO95487 1268 aa34.25■■■■□ 3.07
CGREF1-207ENST00000440612 CNNM1Q9NRU3 951 aa34.25■■■■□ 3.07
CGREF1-207ENST00000440612 NRXN2Q9P2S2 1712 aa34.24■■■■□ 3.07
CGREF1-207ENST00000440612 DBNDD2Q9BQY9 259 aa34.24■■■■□ 3.07
CGREF1-207ENST00000440612 RBM19Q9Y4C8 960 aaKnown RBP34.23■■■■□ 3.07
CGREF1-207ENST00000440612 TIMM10P62072 90 aa34.22■■■■□ 3.07
CGREF1-207ENST00000440612 CDC5LQ99459 802 aaKnown RBP34.22■■■■□ 3.07
CGREF1-207ENST00000440612 A0A1B0GUL7 405 aa34.21■■■■□ 3.07
CGREF1-207ENST00000440612 GLRX3O76003 335 aaKnown RBP34.21■■■■□ 3.07
CGREF1-207ENST00000440612 METTL24Q5JXM2 366 aa34.21■■■■□ 3.07
CGREF1-207ENST00000440612 NPHP1O15259 732 aa34.2■■■■□ 3.07
CGREF1-207ENST00000440612 CELF1Q92879 486 aaKnown RBP34.2■■■■□ 3.07
CGREF1-207ENST00000440612 TAF1P21675 1872 aa34.2■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms