RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 NCBP3Q53F19 620 aaKnown RBP21.73■■□□□ 1.07
COL16A1-204ENST00000440437 TSR2Q969E8 191 aaKnown RBP21.73■■□□□ 1.07
COL16A1-204ENST00000440437 MRS2Q9HD23 443 aa21.73■■□□□ 1.07
COL16A1-204ENST00000440437 PASKQ96RG2 1323 aa21.73■■□□□ 1.07
COL16A1-204ENST00000440437 CCDC30Q5VVM6 783 aa21.72■■□□□ 1.07
COL16A1-204ENST00000440437 NIM1KQ8IY84 436 aa21.72■■□□□ 1.07
COL16A1-204ENST00000440437 SUPT20HQ8NEM7 779 aa21.72■■□□□ 1.07
COL16A1-204ENST00000440437 MYH3P11055 1940 aa21.71■■□□□ 1.07
COL16A1-204ENST00000440437 CACNA1FO60840 1977 aa21.71■■□□□ 1.07
COL16A1-204ENST00000440437 ANP32CO43423 234 aa21.71■■□□□ 1.07
COL16A1-204ENST00000440437 SCNN1DP51172 638 aa21.71■■□□□ 1.07
COL16A1-204ENST00000440437 EAPPQ56P03 285 aaPredicted RBP21.71■■□□□ 1.07
COL16A1-204ENST00000440437 DPP8Q6V1X1 898 aaPredicted RBP21.71■■□□□ 1.07
COL16A1-204ENST00000440437 TMC4Q7Z404 712 aa21.71■■□□□ 1.07
COL16A1-204ENST00000440437 MPNDQ8N594 471 aa21.71■■□□□ 1.07
COL16A1-204ENST00000440437 GJA3Q9Y6H8 435 aa21.71■■□□□ 1.07
COL16A1-204ENST00000440437 IRS4O14654 1257 aaPredicted RBP21.7■■□□□ 1.06
COL16A1-204ENST00000440437 RTL5Q5HYW3 569 aaPredicted RBP21.7■■□□□ 1.06
COL16A1-204ENST00000440437 PNMA8AQ86V59 439 aaPredicted RBP21.7■■□□□ 1.06
COL16A1-204ENST00000440437 MYD88Q99836 296 aa21.7■■□□□ 1.06
COL16A1-204ENST00000440437 CHMP4AQ9BY43 222 aa21.7■■□□□ 1.06
COL16A1-204ENST00000440437 CREBZFQ9NS37 354 aa21.7■■□□□ 1.06
COL16A1-204ENST00000440437 IL16Q14005 1332 aa21.7■■□□□ 1.06
COL16A1-204ENST00000440437 ITGBL1O95965 494 aaPredicted RBP21.69■■□□□ 1.06
COL16A1-204ENST00000440437 KIAA2012Q0VF49 1180 aa21.69■■□□□ 1.06
COL16A1-204ENST00000440437 ZBTB38Q8NAP3 1195 aaPredicted RBP21.69■■□□□ 1.06
COL16A1-204ENST00000440437 CELF1Q92879 486 aaKnown RBP21.69■■□□□ 1.06
COL16A1-204ENST00000440437 CCDC191Q8NCU4 936 aa21.68■■□□□ 1.06
COL16A1-204ENST00000440437 METTL22Q9BUU2 404 aaPredicted RBP21.68■■□□□ 1.06
COL16A1-204ENST00000440437 PCNTO95613 3336 aa21.67■■□□□ 1.06
COL16A1-204ENST00000440437 DDX58O95786 925 aaKnown RBP21.67■■□□□ 1.06
COL16A1-204ENST00000440437 ZNRF3Q9ULT6 936 aa21.67■■□□□ 1.06
COL16A1-204ENST00000440437 PCCAP05165 728 aaPredicted RBP21.66■■□□□ 1.06
COL16A1-204ENST00000440437 LMOD1P29536 600 aaPredicted RBP21.66■■□□□ 1.06
COL16A1-204ENST00000440437 EPS15P42566 896 aa21.66■■□□□ 1.06
COL16A1-204ENST00000440437 CXCL9Q07325 125 aa21.66■■□□□ 1.06
COL16A1-204ENST00000440437 TWISTNBQ3B726 338 aaPredicted RBP21.66■■□□□ 1.06
COL16A1-204ENST00000440437 CLEC11AQ9Y240 323 aa21.66■■□□□ 1.06
COL16A1-204ENST00000440437 TRPM7Q96QT4 1865 aa21.65■■□□□ 1.06
COL16A1-204ENST00000440437 CWC25Q9NXE8 425 aaPredicted RBP21.65■■□□□ 1.06
COL16A1-204ENST00000440437 MAP3K2Q9Y2U5 619 aa21.65■■□□□ 1.06
COL16A1-204ENST00000440437 SPEF2Q9C093 1822 aa21.64■■□□□ 1.06
COL16A1-204ENST00000440437 MAP1SQ66K74 1059 aaPredicted RBP21.64■■□□□ 1.05
COL16A1-204ENST00000440437 FANCIQ9NVI1 1328 aa21.63■■□□□ 1.05
COL16A1-204ENST00000440437 PI4KAP2A4QPH2 592 aa21.63■■□□□ 1.05
COL16A1-204ENST00000440437 IFFO2Q5TF58 517 aa21.63■■□□□ 1.05
COL16A1-204ENST00000440437 KSR2Q6VAB6 950 aa21.63■■□□□ 1.05
COL16A1-204ENST00000440437 CNTROBQ8N137 903 aa21.63■■□□□ 1.05
COL16A1-204ENST00000440437 PI4KAP1Q8N8J0 262 aa21.63■■□□□ 1.05
COL16A1-204ENST00000440437 STK31Q9BXU1 1019 aa21.63■■□□□ 1.05
COL16A1-204ENST00000440437 GPRC5DQ9NZD1 345 aa21.63■■□□□ 1.05
COL16A1-204ENST00000440437 CDHR2Q9BYE9 1310 aa21.62■■□□□ 1.05
COL16A1-204ENST00000440437 YDJCA8MPS7 323 aa21.62■■□□□ 1.05
COL16A1-204ENST00000440437 PDE8AO60658 829 aa21.62■■□□□ 1.05
COL16A1-204ENST00000440437 IGKV5-2P06315 115 aa21.62■■□□□ 1.05
COL16A1-204ENST00000440437 HSP90B1P14625 803 aaKnown RBP21.62■■□□□ 1.05
COL16A1-204ENST00000440437 CIAPIN1Q6FI81 312 aa21.62■■□□□ 1.05
COL16A1-204ENST00000440437 USP50Q70EL3 339 aaPredicted RBP21.62■■□□□ 1.05
COL16A1-204ENST00000440437 SEC31BQ9NQW1 1179 aa21.62■■□□□ 1.05
COL16A1-204ENST00000440437 PSME4Q14997 1843 aa21.62■■□□□ 1.05
COL16A1-204ENST00000440437 CNTNAP1P78357 1384 aa21.61■■□□□ 1.05
COL16A1-204ENST00000440437 RPS8P62241 208 aaKnown RBP21.61■■□□□ 1.05
COL16A1-204ENST00000440437 GPSM2P81274 684 aa21.61■■□□□ 1.05
COL16A1-204ENST00000440437 G2E3Q7L622 706 aa21.61■■□□□ 1.05
COL16A1-204ENST00000440437 WDR63Q8IWG1 891 aa21.61■■□□□ 1.05
COL16A1-204ENST00000440437 NSFL1CQ9UNZ2 370 aaKnown RBP21.61■■□□□ 1.05
COL16A1-204ENST00000440437 SCN9AQ15858 1988 aa21.61■■□□□ 1.05
COL16A1-204ENST00000440437 TMEM88BA6NKF7 163 aa21.6■■□□□ 1.05
COL16A1-204ENST00000440437 JARID2Q92833 1246 aaPredicted RBP21.6■■□□□ 1.05
COL16A1-204ENST00000440437 POLLQ9UGP5 575 aa21.6■■□□□ 1.05
COL16A1-204ENST00000440437 MKRN1Q9UHC7 482 aaKnown RBP21.6■■□□□ 1.05
COL16A1-204ENST00000440437 RAD17O75943 681 aa21.59■■□□□ 1.05
COL16A1-204ENST00000440437 GMPSP49915 693 aaPredicted RBP21.59■■□□□ 1.05
COL16A1-204ENST00000440437 WASHC4Q2M389 1173 aa21.59■■□□□ 1.05
COL16A1-204ENST00000440437 CCDC152Q4G0S7 254 aa21.59■■□□□ 1.05
COL16A1-204ENST00000440437 ADARB2Q9NS39 739 aaKnown RBP21.59■■□□□ 1.05
COL16A1-204ENST00000440437 SLC4A2P04920 1241 aa21.58■■□□□ 1.05
COL16A1-204ENST00000440437 PODXL2Q9NZ53 605 aa21.58■■□□□ 1.05
COL16A1-204ENST00000440437 SALL2Q9Y467 1007 aaPredicted RBP21.58■■□□□ 1.05
COL16A1-204ENST00000440437 NEURL1BA8MQ27 555 aa21.57■■□□□ 1.04
COL16A1-204ENST00000440437 HSPA1AP0DMV8 641 aaKnown RBP21.57■■□□□ 1.04
COL16A1-204ENST00000440437 HSPA1BP0DMV9 641 aaKnown RBP21.57■■□□□ 1.04
COL16A1-204ENST00000440437 NEXNQ0ZGT2 675 aa21.57■■□□□ 1.04
COL16A1-204ENST00000440437 TNIP1Q15025 636 aa21.57■■□□□ 1.04
COL16A1-204ENST00000440437 CWF19L2Q2TBE0 894 aaKnown RBP21.57■■□□□ 1.04
COL16A1-204ENST00000440437 TBC1D16Q8TBP0 767 aa21.57■■□□□ 1.04
COL16A1-204ENST00000440437 C6orf229H3BNL8 230 aa21.56■■□□□ 1.04
COL16A1-204ENST00000440437 CTSWP56202 376 aa21.56■■□□□ 1.04
COL16A1-204ENST00000440437 FLIIQ13045 1269 aa21.56■■□□□ 1.04
COL16A1-204ENST00000440437 EYA3Q99504 573 aa21.56■■□□□ 1.04
COL16A1-204ENST00000440437 DBNDD1Q9H9R9 158 aa21.56■■□□□ 1.04
COL16A1-204ENST00000440437 THSD7BQ9C0I4 1608 aa21.55■■□□□ 1.04
COL16A1-204ENST00000440437 RIMBP2O15034 1052 aa21.55■■□□□ 1.04
COL16A1-204ENST00000440437 VAMP4O75379 141 aa21.55■■□□□ 1.04
COL16A1-204ENST00000440437 GPR101Q96P66 508 aaPredicted RBP21.55■■□□□ 1.04
COL16A1-204ENST00000440437 CCDC85AQ96PX6 553 aaPredicted RBP21.55■■□□□ 1.04
COL16A1-204ENST00000440437 SPINK5Q9NQ38 1064 aaPredicted RBP21.55■■□□□ 1.04
COL16A1-204ENST00000440437 RTL9Q8NET4 1388 aa21.54■■□□□ 1.04
COL16A1-204ENST00000440437 ECE2O60344 883 aa21.54■■□□□ 1.04
COL16A1-204ENST00000440437 EXOSC9Q06265 439 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms