RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 GJA3Q9Y6H8 435 aa25.48■■□□□ 1.67
SHROOM1-204ENST00000440118 LRRC37AA6NMS7 1700 aa25.47■■□□□ 1.67
SHROOM1-204ENST00000440118 FZD9O00144 591 aa25.47■■□□□ 1.67
SHROOM1-204ENST00000440118 NEXNQ0ZGT2 675 aa25.47■■□□□ 1.67
SHROOM1-204ENST00000440118 SP8Q8IXZ3 490 aa25.47■■□□□ 1.67
SHROOM1-204ENST00000440118 MPNDQ8N594 471 aa25.47■■□□□ 1.67
SHROOM1-204ENST00000440118 ZBTB38Q8NAP3 1195 aaPredicted RBP25.47■■□□□ 1.67
SHROOM1-204ENST00000440118 CCDC191Q8NCU4 936 aa25.47■■□□□ 1.67
SHROOM1-204ENST00000440118 L3MBTL3Q96JM7 780 aaPredicted RBP25.47■■□□□ 1.67
SHROOM1-204ENST00000440118 METTL22Q9BUU2 404 aaPredicted RBP25.47■■□□□ 1.67
SHROOM1-204ENST00000440118 HACL1Q9UJ83 578 aa25.46■■□□□ 1.67
SHROOM1-204ENST00000440118 COL4A5P29400 1685 aa25.45■■□□□ 1.67
SHROOM1-204ENST00000440118 SLC4A2P04920 1241 aa25.45■■□□□ 1.66
SHROOM1-204ENST00000440118 AOC3Q16853 763 aa25.45■■□□□ 1.66
SHROOM1-204ENST00000440118 EAPPQ56P03 285 aaPredicted RBP25.45■■□□□ 1.66
SHROOM1-204ENST00000440118 KSR2Q6VAB6 950 aa25.45■■□□□ 1.66
SHROOM1-204ENST00000440118 GPC2Q8N158 579 aa25.45■■□□□ 1.66
SHROOM1-204ENST00000440118 MYH3P11055 1940 aa25.45■■□□□ 1.66
SHROOM1-204ENST00000440118 PI4KAP2A4QPH2 592 aa25.44■■□□□ 1.66
SHROOM1-204ENST00000440118 LMOD1P29536 600 aaPredicted RBP25.44■■□□□ 1.66
SHROOM1-204ENST00000440118 SF3B3Q15393 1217 aaKnown RBP25.44■■□□□ 1.66
SHROOM1-204ENST00000440118 PI4KAP1Q8N8J0 262 aa25.44■■□□□ 1.66
SHROOM1-204ENST00000440118 CHADLQ6NUI6 762 aa25.43■■□□□ 1.66
SHROOM1-204ENST00000440118 TAF1DQ9H5J8 278 aaPredicted RBP25.43■■□□□ 1.66
SHROOM1-204ENST00000440118 MYH16Q9H6N6 1097 aa25.43■■□□□ 1.66
SHROOM1-204ENST00000440118 PCCAP05165 728 aaPredicted RBP25.42■■□□□ 1.66
SHROOM1-204ENST00000440118 HTRA3P83110 453 aa25.42■■□□□ 1.66
SHROOM1-204ENST00000440118 VPS33BQ9H267 617 aa25.42■■□□□ 1.66
SHROOM1-204ENST00000440118 EPHX2P34913 555 aa25.41■■□□□ 1.66
SHROOM1-204ENST00000440118 CCDC152Q4G0S7 254 aa25.41■■□□□ 1.66
SHROOM1-204ENST00000440118 LDHDQ86WU2 507 aa25.41■■□□□ 1.66
SHROOM1-204ENST00000440118 CELF1Q92879 486 aaKnown RBP25.41■■□□□ 1.66
SHROOM1-204ENST00000440118 CLEC11AQ9Y240 323 aa25.41■■□□□ 1.66
SHROOM1-204ENST00000440118 EXOSC9Q06265 439 aaKnown RBP25.4■■□□□ 1.66
SHROOM1-204ENST00000440118 FKBP5Q13451 457 aaPredicted RBP25.4■■□□□ 1.66
SHROOM1-204ENST00000440118 JARID2Q92833 1246 aaPredicted RBP25.4■■□□□ 1.66
SHROOM1-204ENST00000440118 PDE8AO60658 829 aa25.39■■□□□ 1.66
SHROOM1-204ENST00000440118 POTEIP0CG38 1075 aa25.39■■□□□ 1.66
SHROOM1-204ENST00000440118 POTEJP0CG39 1038 aa25.39■■□□□ 1.66
SHROOM1-204ENST00000440118 FLIIQ13045 1269 aa25.39■■□□□ 1.66
SHROOM1-204ENST00000440118 G2E3Q7L622 706 aa25.39■■□□□ 1.66
SHROOM1-204ENST00000440118 PNMA8AQ86V59 439 aaPredicted RBP25.39■■□□□ 1.66
SHROOM1-204ENST00000440118 RTFDC1Q9BY42 306 aaPredicted RBP25.39■■□□□ 1.66
SHROOM1-204ENST00000440118 NSFL1CQ9UNZ2 370 aaKnown RBP25.39■■□□□ 1.66
SHROOM1-204ENST00000440118 SPEF2Q9C093 1822 aa25.38■■□□□ 1.65
SHROOM1-204ENST00000440118 CCDC85AQ96PX6 553 aaPredicted RBP25.38■■□□□ 1.65
SHROOM1-204ENST00000440118 ZNRF3Q9ULT6 936 aa25.38■■□□□ 1.65
SHROOM1-204ENST00000440118 DUOX1Q9NRD9 1551 aa25.38■■□□□ 1.65
SHROOM1-204ENST00000440118 KIAA2012Q0VF49 1180 aa25.37■■□□□ 1.65
SHROOM1-204ENST00000440118 COL4A1P02462 1669 aa25.36■■□□□ 1.65
SHROOM1-204ENST00000440118 C6orf229H3BNL8 230 aa25.36■■□□□ 1.65
SHROOM1-204ENST00000440118 RPS8P62241 208 aaKnown RBP25.36■■□□□ 1.65
SHROOM1-204ENST00000440118 CWF19L2Q2TBE0 894 aaKnown RBP25.36■■□□□ 1.65
SHROOM1-204ENST00000440118 CDHR2Q9BYE9 1310 aa25.36■■□□□ 1.65
SHROOM1-204ENST00000440118 VAMP4O75379 141 aa25.35■■□□□ 1.65
SHROOM1-204ENST00000440118 IGKV5-2P06315 115 aa25.35■■□□□ 1.65
SHROOM1-204ENST00000440118 SEC31BQ9NQW1 1179 aa25.35■■□□□ 1.65
SHROOM1-204ENST00000440118 NEURL1BA8MQ27 555 aa25.34■■□□□ 1.65
SHROOM1-204ENST00000440118 KLRG1Q96E93 195 aa25.34■■□□□ 1.65
SHROOM1-204ENST00000440118 LTBP1Q14766 1721 aa25.34■■□□□ 1.65
SHROOM1-204ENST00000440118 ADAMTSL1Q8N6G6 1762 aa25.33■■□□□ 1.65
SHROOM1-204ENST00000440118 WASHC4Q2M389 1173 aa25.33■■□□□ 1.65
SHROOM1-204ENST00000440118 DNAAF4Q8WXU2 420 aa25.33■■□□□ 1.65
SHROOM1-204ENST00000440118 EYA3Q99504 573 aa25.33■■□□□ 1.65
SHROOM1-204ENST00000440118 SPINK5Q9NQ38 1064 aaPredicted RBP25.33■■□□□ 1.65
SHROOM1-204ENST00000440118 ANKIB1Q9P2G1 1089 aa25.33■■□□□ 1.65
SHROOM1-204ENST00000440118 CTSWP56202 376 aa25.32■■□□□ 1.64
SHROOM1-204ENST00000440118 GPSM2P81274 684 aa25.32■■□□□ 1.64
SHROOM1-204ENST00000440118 CIAPIN1Q6FI81 312 aa25.32■■□□□ 1.64
SHROOM1-204ENST00000440118 UBE3BQ7Z3V4 1068 aa25.32■■□□□ 1.64
SHROOM1-204ENST00000440118 ANKRD18AQ8IVF6 992 aa25.32■■□□□ 1.64
SHROOM1-204ENST00000440118 DNAJC5GQ8N7S2 189 aa25.32■■□□□ 1.64
SHROOM1-204ENST00000440118 BCL2L13Q9BXK5 485 aa25.32■■□□□ 1.64
SHROOM1-204ENST00000440118 RIMBP2O15034 1052 aa25.31■■□□□ 1.64
SHROOM1-204ENST00000440118 SCNN1DP51172 638 aa25.31■■□□□ 1.64
SHROOM1-204ENST00000440118 CXCL9Q07325 125 aa25.31■■□□□ 1.64
SHROOM1-204ENST00000440118 TNIP1Q15025 636 aa25.31■■□□□ 1.64
SHROOM1-204ENST00000440118 CDC5LQ99459 802 aaKnown RBP25.31■■□□□ 1.64
SHROOM1-204ENST00000440118 G3V3G9 751 aa25.3■■□□□ 1.64
SHROOM1-204ENST00000440118 RAD17O75943 681 aa25.3■■□□□ 1.64
SHROOM1-204ENST00000440118 DCAF8Q5TAQ9 597 aa25.3■■□□□ 1.64
SHROOM1-204ENST00000440118 UFL1O94874 794 aa25.29■■□□□ 1.64
SHROOM1-204ENST00000440118 EPS15P42566 896 aa25.29■■□□□ 1.64
SHROOM1-204ENST00000440118 GCKRQ14397 625 aa25.28■■□□□ 1.64
SHROOM1-204ENST00000440118 MAP1SQ66K74 1059 aaPredicted RBP25.28■■□□□ 1.64
SHROOM1-204ENST00000440118 LINS1Q8NG48 757 aa25.28■■□□□ 1.64
SHROOM1-204ENST00000440118 DBNDD1Q9H9R9 158 aa25.28■■□□□ 1.64
SHROOM1-204ENST00000440118 GGA1Q9UJY5 639 aa25.28■■□□□ 1.64
SHROOM1-204ENST00000440118 GMPSP49915 693 aaPredicted RBP25.27■■□□□ 1.64
SHROOM1-204ENST00000440118 TBC1D16Q8TBP0 767 aa25.27■■□□□ 1.64
SHROOM1-204ENST00000440118 CREBZFQ9NS37 354 aa25.27■■□□□ 1.64
SHROOM1-204ENST00000440118 GPRC5DQ9NZD1 345 aa25.27■■□□□ 1.64
SHROOM1-204ENST00000440118 POLLQ9UGP5 575 aa25.27■■□□□ 1.64
SHROOM1-204ENST00000440118 GPR101Q96P66 508 aaPredicted RBP25.26■■□□□ 1.63
SHROOM1-204ENST00000440118 ZC3H12CQ9C0D7 883 aaKnown RBP25.26■■□□□ 1.63
SHROOM1-204ENST00000440118 USP50Q70EL3 339 aaPredicted RBP25.25■■□□□ 1.63
SHROOM1-204ENST00000440118 CNTROBQ8N137 903 aa25.25■■□□□ 1.63
SHROOM1-204ENST00000440118 TTLL11Q8NHH1 800 aa25.25■■□□□ 1.63
SHROOM1-204ENST00000440118 GREM2Q9H772 168 aa25.25■■□□□ 1.63
SHROOM1-204ENST00000440118 ADARB2Q9NS39 739 aaKnown RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms