RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 ISCA1Q9BUE6 129 aa20.74■□□□□ 0.91
ITGB1-207ENST00000439974 RTFDC1Q9BY42 306 aaPredicted RBP20.74■□□□□ 0.91
ITGB1-207ENST00000439974 AOC3Q16853 763 aa20.73■□□□□ 0.91
ITGB1-207ENST00000439974 ITGBL1O95965 494 aaPredicted RBP20.72■□□□□ 0.91
ITGB1-207ENST00000439974 DPP8Q6V1X1 898 aaPredicted RBP20.72■□□□□ 0.91
ITGB1-207ENST00000439974 MPNDQ8N594 471 aa20.72■□□□□ 0.91
ITGB1-207ENST00000439974 MKRN1Q9UHC7 482 aaKnown RBP20.72■□□□□ 0.91
ITGB1-207ENST00000439974 DDX60Q8IY21 1712 aaKnown RBP20.72■□□□□ 0.91
ITGB1-207ENST00000439974 LTBP1Q14766 1721 aa20.71■□□□□ 0.91
ITGB1-207ENST00000439974 ATP5J2-PTCD1G3V325 749 aa20.71■□□□□ 0.91
ITGB1-207ENST00000439974 HSPA1AP0DMV8 641 aaKnown RBP20.71■□□□□ 0.91
ITGB1-207ENST00000439974 HSPA1BP0DMV9 641 aaKnown RBP20.71■□□□□ 0.91
ITGB1-207ENST00000439974 SCNN1DP51172 638 aa20.71■□□□□ 0.91
ITGB1-207ENST00000439974 C8orf58Q8NAV2 365 aa20.71■□□□□ 0.91
ITGB1-207ENST00000439974 ZNF428Q96B54 188 aa20.71■□□□□ 0.91
ITGB1-207ENST00000439974 SPINK5Q9NQ38 1064 aaPredicted RBP20.71■□□□□ 0.91
ITGB1-207ENST00000439974 GOLGA2Q08379 1002 aa20.7■□□□□ 0.9
ITGB1-207ENST00000439974 TMC4Q7Z404 712 aa20.7■□□□□ 0.9
ITGB1-207ENST00000439974 CNTROBQ8N137 903 aa20.7■□□□□ 0.9
ITGB1-207ENST00000439974 FAM89AQ96GI7 184 aa20.7■□□□□ 0.9
ITGB1-207ENST00000439974 TAF1P21675 1872 aa20.7■□□□□ 0.9
ITGB1-207ENST00000439974 TMEM88BA6NKF7 163 aa20.69■□□□□ 0.9
ITGB1-207ENST00000439974 TRIM28Q13263 835 aaKnown RBP20.69■□□□□ 0.9
ITGB1-207ENST00000439974 MAP1SQ66K74 1059 aaPredicted RBP20.69■□□□□ 0.9
ITGB1-207ENST00000439974 RIC3Q7Z5B4 369 aa20.69■□□□□ 0.9
ITGB1-207ENST00000439974 TSPYL6Q8N831 410 aa20.69■□□□□ 0.9
ITGB1-207ENST00000439974 ZNRF3Q9ULT6 936 aa20.69■□□□□ 0.9
ITGB1-207ENST00000439974 CNTNAP1P78357 1384 aa20.69■□□□□ 0.9
ITGB1-207ENST00000439974 EPS15P42566 896 aa20.68■□□□□ 0.9
ITGB1-207ENST00000439974 KIAA2012Q0VF49 1180 aa20.68■□□□□ 0.9
ITGB1-207ENST00000439974 SF3B3Q15393 1217 aaKnown RBP20.68■□□□□ 0.9
ITGB1-207ENST00000439974 LRRC37AA6NMS7 1700 aa20.67■□□□□ 0.9
ITGB1-207ENST00000439974 COL13A1Q5TAT6 717 aaPredicted RBP20.67■□□□□ 0.9
ITGB1-207ENST00000439974 PHAXQ9H814 394 aaKnown RBP20.67■□□□□ 0.9
ITGB1-207ENST00000439974 CXCL9Q07325 125 aa20.66■□□□□ 0.9
ITGB1-207ENST00000439974 NCBP3Q53F19 620 aaKnown RBP20.66■□□□□ 0.9
ITGB1-207ENST00000439974 RTL5Q5HYW3 569 aaPredicted RBP20.66■□□□□ 0.9
ITGB1-207ENST00000439974 USP50Q70EL3 339 aaPredicted RBP20.66■□□□□ 0.9
ITGB1-207ENST00000439974 WDR63Q8IWG1 891 aa20.66■□□□□ 0.9
ITGB1-207ENST00000439974 CHMP4AQ9BY43 222 aa20.66■□□□□ 0.9
ITGB1-207ENST00000439974 FANCIQ9NVI1 1328 aa20.66■□□□□ 0.9
ITGB1-207ENST00000439974 DUOX1Q9NRD9 1551 aa20.65■□□□□ 0.9
ITGB1-207ENST00000439974 IL16Q14005 1332 aa20.65■□□□□ 0.9
ITGB1-207ENST00000439974 IRS4O14654 1257 aaPredicted RBP20.65■□□□□ 0.9
ITGB1-207ENST00000439974 CELF1Q92879 486 aaKnown RBP20.65■□□□□ 0.9
ITGB1-207ENST00000439974 CCDC30Q5VVM6 783 aa20.64■□□□□ 0.89
ITGB1-207ENST00000439974 CIAPIN1Q6FI81 312 aa20.64■□□□□ 0.89
ITGB1-207ENST00000439974 ZBTB38Q8NAP3 1195 aaPredicted RBP20.64■□□□□ 0.89
ITGB1-207ENST00000439974 MYD88Q99836 296 aa20.64■□□□□ 0.89
ITGB1-207ENST00000439974 GPRC5DQ9NZD1 345 aa20.64■□□□□ 0.89
ITGB1-207ENST00000439974 HSP90B1P14625 803 aaKnown RBP20.63■□□□□ 0.89
ITGB1-207ENST00000439974 ADARB2Q9NS39 739 aaKnown RBP20.63■□□□□ 0.89
ITGB1-207ENST00000439974 ZNF521Q96K83 1311 aa20.62■□□□□ 0.89
ITGB1-207ENST00000439974 CDHR2Q9BYE9 1310 aa20.62■□□□□ 0.89
ITGB1-207ENST00000439974 GMPSP49915 693 aaPredicted RBP20.62■□□□□ 0.89
ITGB1-207ENST00000439974 TNIP1Q15025 636 aa20.62■□□□□ 0.89
ITGB1-207ENST00000439974 CCDC191Q8NCU4 936 aa20.62■□□□□ 0.89
ITGB1-207ENST00000439974 DDX58O95786 925 aaKnown RBP20.61■□□□□ 0.89
ITGB1-207ENST00000439974 VEGFBP49765 207 aa20.61■□□□□ 0.89
ITGB1-207ENST00000439974 EXOSC9Q06265 439 aaKnown RBP20.61■□□□□ 0.89
ITGB1-207ENST00000439974 NSFL1CQ9UNZ2 370 aaKnown RBP20.61■□□□□ 0.89
ITGB1-207ENST00000439974 RASSF10A6NK89 507 aa20.6■□□□□ 0.89
ITGB1-207ENST00000439974 RAD17O75943 681 aa20.6■□□□□ 0.89
ITGB1-207ENST00000439974 WASHC4Q2M389 1173 aa20.6■□□□□ 0.89
ITGB1-207ENST00000439974 TWISTNBQ3B726 338 aaPredicted RBP20.6■□□□□ 0.89
ITGB1-207ENST00000439974 METTL22Q9BUU2 404 aaPredicted RBP20.6■□□□□ 0.89
ITGB1-207ENST00000439974 BCL2L13Q9BXK5 485 aa20.6■□□□□ 0.89
ITGB1-207ENST00000439974 CWC25Q9NXE8 425 aaPredicted RBP20.6■□□□□ 0.89
ITGB1-207ENST00000439974 COL4A1P02462 1669 aa20.6■□□□□ 0.89
ITGB1-207ENST00000439974 YDJCA8MPS7 323 aa20.59■□□□□ 0.89
ITGB1-207ENST00000439974 PCCAP05165 728 aaPredicted RBP20.59■□□□□ 0.89
ITGB1-207ENST00000439974 RPS8P62241 208 aaKnown RBP20.59■□□□□ 0.89
ITGB1-207ENST00000439974 GPSM2P81274 684 aa20.59■□□□□ 0.89
ITGB1-207ENST00000439974 DEFB115Q30KQ5 88 aa20.59■□□□□ 0.89
ITGB1-207ENST00000439974 TNS4Q8IZW8 715 aa20.59■□□□□ 0.89
ITGB1-207ENST00000439974 CDCA7LQ96GN5 454 aa20.59■□□□□ 0.89
ITGB1-207ENST00000439974 ABT1Q9ULW3 272 aaKnown RBP20.59■□□□□ 0.89
ITGB1-207ENST00000439974 TRPM7Q96QT4 1865 aa20.58■□□□□ 0.89
ITGB1-207ENST00000439974 C6orf229H3BNL8 230 aa20.58■□□□□ 0.89
ITGB1-207ENST00000439974 PDE8AO60658 829 aa20.57■□□□□ 0.88
ITGB1-207ENST00000439974 CCDC152Q4G0S7 254 aa20.57■□□□□ 0.88
ITGB1-207ENST00000439974 EYA3Q99504 573 aa20.57■□□□□ 0.88
ITGB1-207ENST00000439974 STK31Q9BXU1 1019 aa20.57■□□□□ 0.88
ITGB1-207ENST00000439974 MYH16Q9H6N6 1097 aa20.57■□□□□ 0.88
ITGB1-207ENST00000439974 POLLQ9UGP5 575 aa20.57■□□□□ 0.88
ITGB1-207ENST00000439974 MAP3K2Q9Y2U5 619 aa20.57■□□□□ 0.88
ITGB1-207ENST00000439974 RIMBP2O15034 1052 aa20.56■□□□□ 0.88
ITGB1-207ENST00000439974 FMR1Q06787 632 aaKnown RBP eCLIP20.56■□□□□ 0.88
ITGB1-207ENST00000439974 KSR2Q6VAB6 950 aa20.56■□□□□ 0.88
ITGB1-207ENST00000439974 DBNDD1Q9H9R9 158 aa20.56■□□□□ 0.88
ITGB1-207ENST00000439974 SEC31BQ9NQW1 1179 aa20.56■□□□□ 0.88
ITGB1-207ENST00000439974 PI4KAP2A4QPH2 592 aa20.55■□□□□ 0.88
ITGB1-207ENST00000439974 TRAF5O00463 557 aa20.55■□□□□ 0.88
ITGB1-207ENST00000439974 PI4KAP1Q8N8J0 262 aa20.55■□□□□ 0.88
ITGB1-207ENST00000439974 TBC1D16Q8TBP0 767 aa20.55■□□□□ 0.88
ITGB1-207ENST00000439974 AIDAQ96BJ3 306 aa20.55■□□□□ 0.88
ITGB1-207ENST00000439974 CNOT7Q9UIV1 285 aaKnown RBP20.55■□□□□ 0.88
ITGB1-207ENST00000439974 H7C1D1 291 aa20.54■□□□□ 0.88
ITGB1-207ENST00000439974 PSMD14O00487 310 aa20.54■□□□□ 0.88
ITGB1-207ENST00000439974 FOXN1O15353 648 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms