RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 CELF1Q92879 486 aaKnown RBP13.28□□□□□ -0.28
UBE2F-213ENST00000439780 SNED1Q8TER0 1413 aa13.28□□□□□ -0.28
UBE2F-213ENST00000439780 GRM8O00222 908 aa13.27□□□□□ -0.29
UBE2F-213ENST00000439780 CTSWP56202 376 aa13.27□□□□□ -0.29
UBE2F-213ENST00000439780 GRAPQ13588 217 aa13.27□□□□□ -0.29
UBE2F-213ENST00000439780 EPHA10Q5JZY3 1008 aa13.27□□□□□ -0.29
UBE2F-213ENST00000439780 GRAPLQ8TC17 118 aaPredicted RBP13.27□□□□□ -0.29
UBE2F-213ENST00000439780 YTHDC1Q96MU7 727 aaKnown RBP13.27□□□□□ -0.29
UBE2F-213ENST00000439780 PLA2G12BQ9BX93 195 aa13.27□□□□□ -0.29
UBE2F-213ENST00000439780 FER1L6Q2WGJ9 1857 aa13.27□□□□□ -0.29
UBE2F-213ENST00000439780 BBOX1O75936 387 aa13.26□□□□□ -0.29
UBE2F-213ENST00000439780 NBPF7P0C2Y1 421 aaPredicted RBP13.26□□□□□ -0.29
UBE2F-213ENST00000439780 HSP90B1P14625 803 aaKnown RBP13.26□□□□□ -0.29
UBE2F-213ENST00000439780 FOXO4P98177 505 aa13.26□□□□□ -0.29
UBE2F-213ENST00000439780 CCDC93Q567U6 631 aa13.26□□□□□ -0.29
UBE2F-213ENST00000439780 C9orf131Q5VYM1 1079 aa13.26□□□□□ -0.29
UBE2F-213ENST00000439780 ARHGAP45Q92619 1136 aa13.26□□□□□ -0.29
UBE2F-213ENST00000439780 FRAT1Q92837 279 aaPredicted RBP13.26□□□□□ -0.29
UBE2F-213ENST00000439780 KAZALD1Q96I82 304 aa13.26□□□□□ -0.29
UBE2F-213ENST00000439780 KIF16BQ96L93 1317 aa13.26□□□□□ -0.29
UBE2F-213ENST00000439780 API5Q9BZZ5 524 aaKnown RBP13.26□□□□□ -0.29
UBE2F-213ENST00000439780 GREM2Q9H772 168 aa13.26□□□□□ -0.29
UBE2F-213ENST00000439780 ATP6V0A2Q9Y487 856 aa13.26□□□□□ -0.29
UBE2F-213ENST00000439780 SBF1O95248 1867 aa13.25□□□□□ -0.29
UBE2F-213ENST00000439780 UTYO14607 1347 aa13.25□□□□□ -0.29
UBE2F-213ENST00000439780 CSF1RP07333 972 aa13.25□□□□□ -0.29
UBE2F-213ENST00000439780 TRIM27P14373 513 aa13.25□□□□□ -0.29
UBE2F-213ENST00000439780 CCDC152Q4G0S7 254 aa13.25□□□□□ -0.29
UBE2F-213ENST00000439780 SOGA3Q5TF21 947 aa13.25□□□□□ -0.29
UBE2F-213ENST00000439780 SP8Q8IXZ3 490 aa13.25□□□□□ -0.29
UBE2F-213ENST00000439780 SUCLG2Q96I99 432 aa13.25□□□□□ -0.29
UBE2F-213ENST00000439780 USP44Q9H0E7 712 aa13.25□□□□□ -0.29
UBE2F-213ENST00000439780 C9orf78Q9NZ63 289 aaPredicted RBP13.25□□□□□ -0.29
UBE2F-213ENST00000439780 RNF181Q9P0P0 153 aa13.25□□□□□ -0.29
UBE2F-213ENST00000439780 LTBP3Q9NS15 1303 aa13.24□□□□□ -0.29
UBE2F-213ENST00000439780 LMNB1P20700 586 aa13.24□□□□□ -0.29
UBE2F-213ENST00000439780 RPS8P62241 208 aaKnown RBP13.24□□□□□ -0.29
UBE2F-213ENST00000439780 TAOK3Q9H2K8 898 aa13.24□□□□□ -0.29
UBE2F-213ENST00000439780 RTL9Q8NET4 1388 aa13.23□□□□□ -0.29
UBE2F-213ENST00000439780 CCT4P50991 539 aaKnown RBP13.23□□□□□ -0.29
UBE2F-213ENST00000439780 FKBP4Q02790 459 aaKnown RBP eCLIP13.23□□□□□ -0.29
UBE2F-213ENST00000439780 FAM161AQ3B820 660 aa13.23□□□□□ -0.29
UBE2F-213ENST00000439780 CC2D2BQ6DHV5 1058 aa13.23□□□□□ -0.29
UBE2F-213ENST00000439780 ATF7IPQ6VMQ6 1270 aa13.23□□□□□ -0.29
UBE2F-213ENST00000439780 RTKN2Q8IZC4 609 aa13.23□□□□□ -0.29
UBE2F-213ENST00000439780 CLUAP1Q96AJ1 413 aa13.23□□□□□ -0.29
UBE2F-213ENST00000439780 ZNF277Q9NRM2 450 aaPredicted RBP13.23□□□□□ -0.29
UBE2F-213ENST00000439780 MYH3P11055 1940 aa13.22□□□□□ -0.29
UBE2F-213ENST00000439780 IPO8O15397 1037 aaKnown RBP13.22□□□□□ -0.29
UBE2F-213ENST00000439780 INTS3Q68E01 1043 aaKnown RBP13.22□□□□□ -0.29
UBE2F-213ENST00000439780 LMBR1LQ6UX01 489 aa13.22□□□□□ -0.29
UBE2F-213ENST00000439780 ZNF784Q8NCA9 323 aaPredicted RBP13.22□□□□□ -0.29
UBE2F-213ENST00000439780 PSMD1Q99460 953 aa13.22□□□□□ -0.29
UBE2F-213ENST00000439780 CCDC88AQ3V6T2 1871 aa13.22□□□□□ -0.29
UBE2F-213ENST00000439780 ITGA6P23229 1130 aa13.21□□□□□ -0.29
UBE2F-213ENST00000439780 GPSM2P81274 684 aa13.21□□□□□ -0.29
UBE2F-213ENST00000439780 ZKSCAN2Q63HK3 967 aa13.21□□□□□ -0.29
UBE2F-213ENST00000439780 TMC4Q7Z404 712 aa13.21□□□□□ -0.29
UBE2F-213ENST00000439780 ANKRD44Q8N8A2 993 aa13.21□□□□□ -0.29
UBE2F-213ENST00000439780 LRRC37AA6NMS7 1700 aa13.21□□□□□ -0.3
UBE2F-213ENST00000439780 RLBP1P12271 317 aa13.2□□□□□ -0.3
UBE2F-213ENST00000439780 ANKRD18AQ8IVF6 992 aa13.2□□□□□ -0.3
UBE2F-213ENST00000439780 MPNDQ8N594 471 aa13.2□□□□□ -0.3
UBE2F-213ENST00000439780 MEIS3Q99687 375 aa13.2□□□□□ -0.3
UBE2F-213ENST00000439780 RTFDC1Q9BY42 306 aaPredicted RBP13.2□□□□□ -0.3
UBE2F-213ENST00000439780 BICC1Q9H694 974 aaKnown RBP13.2□□□□□ -0.3
UBE2F-213ENST00000439780 RCAN3Q9UKA8 241 aa13.2□□□□□ -0.3
UBE2F-213ENST00000439780 COL4A5P29400 1685 aa13.2□□□□□ -0.3
UBE2F-213ENST00000439780 DUOX1Q9NRD9 1551 aa13.2□□□□□ -0.3
UBE2F-213ENST00000439780 WTIPA6NIX2 430 aaPredicted RBP13.19□□□□□ -0.3
UBE2F-213ENST00000439780 IARSP41252 1262 aaKnown RBP13.19□□□□□ -0.3
UBE2F-213ENST00000439780 RABL6Q3YEC7 729 aaPredicted RBP13.19□□□□□ -0.3
UBE2F-213ENST00000439780 GRIPAP1Q4V328 841 aa13.19□□□□□ -0.3
UBE2F-213ENST00000439780 DPP8Q6V1X1 898 aaPredicted RBP13.19□□□□□ -0.3
UBE2F-213ENST00000439780 TMEM57Q8N5G2 664 aa13.19□□□□□ -0.3
UBE2F-213ENST00000439780 ZNF594Q96JF6 807 aaPredicted RBP13.19□□□□□ -0.3
UBE2F-213ENST00000439780 CDC5LQ99459 802 aaKnown RBP13.19□□□□□ -0.3
UBE2F-213ENST00000439780 CHMP3Q9Y3E7 222 aa13.19□□□□□ -0.3
UBE2F-213ENST00000439780 ZNF526Q8TF50 670 aaPredicted RBP13.18□□□□□ -0.3
UBE2F-213ENST00000439780 GPR101Q96P66 508 aaPredicted RBP13.18□□□□□ -0.3
UBE2F-213ENST00000439780 TMX4Q9H1E5 349 aaPredicted RBP13.18□□□□□ -0.3
UBE2F-213ENST00000439780 BSDC1Q9NW68 430 aaPredicted RBP13.18□□□□□ -0.3
UBE2F-213ENST00000439780 POLLQ9UGP5 575 aa13.18□□□□□ -0.3
UBE2F-213ENST00000439780 MINPP1Q9UNW1 487 aa13.18□□□□□ -0.3
UBE2F-213ENST00000439780 NSFL1CQ9UNZ2 370 aaKnown RBP13.18□□□□□ -0.3
UBE2F-213ENST00000439780 DICER1Q9UPY3 1922 aaKnown RBP13.17□□□□□ -0.3
UBE2F-213ENST00000439780 LTBP1Q14766 1721 aa13.17□□□□□ -0.3
UBE2F-213ENST00000439780 ANKRD18BA2A2Z9 1011 aa13.17□□□□□ -0.3
UBE2F-213ENST00000439780 PLIN1O60240 522 aa13.17□□□□□ -0.3
UBE2F-213ENST00000439780 UBTFL1P0CB47 393 aaPredicted RBP13.17□□□□□ -0.3
UBE2F-213ENST00000439780 IFIT5Q13325 482 aaKnown RBP13.17□□□□□ -0.3
UBE2F-213ENST00000439780 AOC3Q16853 763 aa13.17□□□□□ -0.3
UBE2F-213ENST00000439780 DZIP1LQ8IYY4 767 aaKnown RBP13.17□□□□□ -0.3
UBE2F-213ENST00000439780 PODXL2Q9NZ53 605 aa13.17□□□□□ -0.3
UBE2F-213ENST00000439780 SPEF2Q9C093 1822 aa13.17□□□□□ -0.3
UBE2F-213ENST00000439780 TIAM2Q8IVF5 1701 aa13.16□□□□□ -0.3
UBE2F-213ENST00000439780 IGHMBP2P38935 993 aaKnown RBP13.16□□□□□ -0.3
UBE2F-213ENST00000439780 TBC1D16Q8TBP0 767 aa13.16□□□□□ -0.3
UBE2F-213ENST00000439780 PANK1Q8TE04 598 aa13.16□□□□□ -0.3
UBE2F-213ENST00000439780 LRRFIP2Q9Y608 721 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms