RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 CLEC11AQ9Y240 323 aa24.2■■□□□ 1.46
CCDC78-204ENST00000439619 IRS4O14654 1257 aaPredicted RBP24.19■■□□□ 1.46
CCDC78-204ENST00000439619 SF3B3Q15393 1217 aaKnown RBP24.19■■□□□ 1.46
CCDC78-204ENST00000439619 ZBTB38Q8NAP3 1195 aaPredicted RBP24.19■■□□□ 1.46
CCDC78-204ENST00000439619 TSR2Q969E8 191 aaKnown RBP24.19■■□□□ 1.46
CCDC78-204ENST00000439619 MYD88Q99836 296 aa24.19■■□□□ 1.46
CCDC78-204ENST00000439619 RTFDC1Q9BY42 306 aaPredicted RBP24.19■■□□□ 1.46
CCDC78-204ENST00000439619 AOC3Q16853 763 aa24.18■■□□□ 1.46
CCDC78-204ENST00000439619 RTL5Q5HYW3 569 aaPredicted RBP24.18■■□□□ 1.46
CCDC78-204ENST00000439619 CCDC191Q8NCU4 936 aa24.18■■□□□ 1.46
CCDC78-204ENST00000439619 TWISTNBQ3B726 338 aaPredicted RBP24.17■■□□□ 1.46
CCDC78-204ENST00000439619 CWC25Q9NXE8 425 aaPredicted RBP24.17■■□□□ 1.46
CCDC78-204ENST00000439619 POTEIP0CG38 1075 aa24.16■■□□□ 1.46
CCDC78-204ENST00000439619 POTEJP0CG39 1038 aa24.16■■□□□ 1.46
CCDC78-204ENST00000439619 NEXNQ0ZGT2 675 aa24.16■■□□□ 1.46
CCDC78-204ENST00000439619 TSPYL6Q8N831 410 aa24.16■■□□□ 1.46
CCDC78-204ENST00000439619 METTL22Q9BUU2 404 aaPredicted RBP24.16■■□□□ 1.46
CCDC78-204ENST00000439619 ZNRF3Q9ULT6 936 aa24.16■■□□□ 1.46
CCDC78-204ENST00000439619 SCN4AP35499 1836 aa24.15■■□□□ 1.46
CCDC78-204ENST00000439619 KSR2Q6VAB6 950 aa24.14■■□□□ 1.45
CCDC78-204ENST00000439619 WDR63Q8IWG1 891 aa24.14■■□□□ 1.45
CCDC78-204ENST00000439619 CREBZFQ9NS37 354 aa24.14■■□□□ 1.45
CCDC78-204ENST00000439619 MAP3K2Q9Y2U5 619 aa24.14■■□□□ 1.45
CCDC78-204ENST00000439619 PCCAP05165 728 aaPredicted RBP24.13■■□□□ 1.45
CCDC78-204ENST00000439619 KIAA2012Q0VF49 1180 aa24.13■■□□□ 1.45
CCDC78-204ENST00000439619 JMYQ8N9B5 988 aa24.13■■□□□ 1.45
CCDC78-204ENST00000439619 CCDC152Q4G0S7 254 aa24.12■■□□□ 1.45
CCDC78-204ENST00000439619 SLC51AQ86UW1 340 aa24.12■■□□□ 1.45
CCDC78-204ENST00000439619 NSFL1CQ9UNZ2 370 aaKnown RBP24.12■■□□□ 1.45
CCDC78-204ENST00000439619 SALL2Q9Y467 1007 aaPredicted RBP24.12■■□□□ 1.45
CCDC78-204ENST00000439619 RPS8P62241 208 aaKnown RBP24.11■■□□□ 1.45
CCDC78-204ENST00000439619 TNIP1Q15025 636 aa24.11■■□□□ 1.45
CCDC78-204ENST00000439619 CELF1Q92879 486 aaKnown RBP24.11■■□□□ 1.45
CCDC78-204ENST00000439619 PI4KAP2A4QPH2 592 aa24.1■■□□□ 1.45
CCDC78-204ENST00000439619 PDE8AO60658 829 aa24.1■■□□□ 1.45
CCDC78-204ENST00000439619 SLC4A2P04920 1241 aa24.1■■□□□ 1.45
CCDC78-204ENST00000439619 PI4KAP1Q8N8J0 262 aa24.1■■□□□ 1.45
CCDC78-204ENST00000439619 C6orf229H3BNL8 230 aa24.09■■□□□ 1.45
CCDC78-204ENST00000439619 WASHC4Q2M389 1173 aa24.09■■□□□ 1.45
CCDC78-204ENST00000439619 CIAPIN1Q6FI81 312 aa24.09■■□□□ 1.45
CCDC78-204ENST00000439619 USP50Q70EL3 339 aaPredicted RBP24.09■■□□□ 1.45
CCDC78-204ENST00000439619 FAM9BQ8IZU0 186 aa24.09■■□□□ 1.45
CCDC78-204ENST00000439619 EYA3Q99504 573 aa24.09■■□□□ 1.45
CCDC78-204ENST00000439619 FANCIQ9NVI1 1328 aa24.09■■□□□ 1.45
CCDC78-204ENST00000439619 COL4A5P29400 1685 aa24.08■■□□□ 1.45
CCDC78-204ENST00000439619 SCNN1DP51172 638 aa24.08■■□□□ 1.45
CCDC78-204ENST00000439619 CXCL9Q07325 125 aa24.08■■□□□ 1.45
CCDC78-204ENST00000439619 CNTROBQ8N137 903 aa24.08■■□□□ 1.45
CCDC78-204ENST00000439619 LAMB2P55268 1798 aa24.08■■□□□ 1.44
CCDC78-204ENST00000439619 PASKQ96RG2 1323 aa24.08■■□□□ 1.44
CCDC78-204ENST00000439619 BCL2L13Q9BXK5 485 aa24.07■■□□□ 1.44
CCDC78-204ENST00000439619 TMEM88BA6NKF7 163 aa24.06■■□□□ 1.44
CCDC78-204ENST00000439619 EPS15P42566 896 aa24.06■■□□□ 1.44
CCDC78-204ENST00000439619 MAP1SQ66K74 1059 aaPredicted RBP24.06■■□□□ 1.44
CCDC78-204ENST00000439619 MYH16Q9H6N6 1097 aa24.06■■□□□ 1.44
CCDC78-204ENST00000439619 ADARB2Q9NS39 739 aaKnown RBP24.06■■□□□ 1.44
CCDC78-204ENST00000439619 GPRC5DQ9NZD1 345 aa24.06■■□□□ 1.44
CCDC78-204ENST00000439619 DDX60Q8IY21 1712 aaKnown RBP24.06■■□□□ 1.44
CCDC78-204ENST00000439619 CDHR2Q9BYE9 1310 aa24.06■■□□□ 1.44
CCDC78-204ENST00000439619 ITGBL1O95965 494 aaPredicted RBP24.05■■□□□ 1.44
CCDC78-204ENST00000439619 ANKIB1Q9P2G1 1089 aa24.05■■□□□ 1.44
CCDC78-204ENST00000439619 G3V3G9 751 aa24.04■■□□□ 1.44
CCDC78-204ENST00000439619 RAD17O75943 681 aa24.04■■□□□ 1.44
CCDC78-204ENST00000439619 GPSM2P81274 684 aa24.04■■□□□ 1.44
CCDC78-204ENST00000439619 FKBP5Q13451 457 aaPredicted RBP24.04■■□□□ 1.44
CCDC78-204ENST00000439619 DCAF8Q5TAQ9 597 aa24.04■■□□□ 1.44
CCDC78-204ENST00000439619 GMPSP49915 693 aaPredicted RBP24.03■■□□□ 1.44
CCDC78-204ENST00000439619 FLIIQ13045 1269 aa24.03■■□□□ 1.44
CCDC78-204ENST00000439619 ANKRD18AQ8IVF6 992 aa24.03■■□□□ 1.44
CCDC78-204ENST00000439619 JARID2Q92833 1246 aaPredicted RBP24.03■■□□□ 1.44
CCDC78-204ENST00000439619 CDC5LQ99459 802 aaKnown RBP24.03■■□□□ 1.44
CCDC78-204ENST00000439619 ZC3H12CQ9C0D7 883 aaKnown RBP24.03■■□□□ 1.44
CCDC78-204ENST00000439619 SEC31BQ9NQW1 1179 aa24.03■■□□□ 1.44
CCDC78-204ENST00000439619 RIMBP2O15034 1052 aa24.02■■□□□ 1.44
CCDC78-204ENST00000439619 IGKV5-2P06315 115 aa24.02■■□□□ 1.44
CCDC78-204ENST00000439619 EXOSC9Q06265 439 aaKnown RBP24.02■■□□□ 1.44
CCDC78-204ENST00000439619 CCDC85AQ96PX6 553 aaPredicted RBP24.02■■□□□ 1.44
CCDC78-204ENST00000439619 MKRN1Q9UHC7 482 aaKnown RBP24.02■■□□□ 1.44
CCDC78-204ENST00000439619 NEURL1BA8MQ27 555 aa24.01■■□□□ 1.43
CCDC78-204ENST00000439619 CTSWP56202 376 aa24.01■■□□□ 1.43
CCDC78-204ENST00000439619 G2E3Q7L622 706 aa24.01■■□□□ 1.43
CCDC78-204ENST00000439619 TBC1D16Q8TBP0 767 aa24.01■■□□□ 1.43
CCDC78-204ENST00000439619 PODXL2Q9NZ53 605 aa24.01■■□□□ 1.43
CCDC78-204ENST00000439619 POLLQ9UGP5 575 aa24.01■■□□□ 1.43
CCDC78-204ENST00000439619 GGA1Q9UJY5 639 aa24.01■■□□□ 1.43
CCDC78-204ENST00000439619 H7C1D1 291 aa24■■□□□ 1.43
CCDC78-204ENST00000439619 VAMP4O75379 141 aa24■■□□□ 1.43
CCDC78-204ENST00000439619 CWF19L2Q2TBE0 894 aaKnown RBP24■■□□□ 1.43
CCDC78-204ENST00000439619 LRRC37AA6NMS7 1700 aa24■■□□□ 1.43
CCDC78-204ENST00000439619 UFL1O94874 794 aa23.99■■□□□ 1.43
CCDC78-204ENST00000439619 DNAAF4Q8WXU2 420 aa23.99■■□□□ 1.43
CCDC78-204ENST00000439619 DBNDD1Q9H9R9 158 aa23.99■■□□□ 1.43
CCDC78-204ENST00000439619 ADAMTSL1Q8N6G6 1762 aa23.98■■□□□ 1.43
CCDC78-204ENST00000439619 IFFO2Q5TF58 517 aa23.98■■□□□ 1.43
CCDC78-204ENST00000439619 UBE3BQ7Z3V4 1068 aa23.98■■□□□ 1.43
CCDC78-204ENST00000439619 LINS1Q8NG48 757 aa23.98■■□□□ 1.43
CCDC78-204ENST00000439619 CNTNAP1P78357 1384 aa23.98■■□□□ 1.43
CCDC78-204ENST00000439619 YDJCA8MPS7 323 aa23.97■■□□□ 1.43
CCDC78-204ENST00000439619 ECE2O60344 883 aa23.97■■□□□ 1.43
CCDC78-204ENST00000439619 XDHP47989 1333 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms