RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 RGS3P49796 1198 aa12.41□□□□□ -0.42
CBX5-202ENST00000439541 CTSWP56202 376 aa12.41□□□□□ -0.42
CBX5-202ENST00000439541 CCDC125Q86Z20 511 aa12.41□□□□□ -0.42
CBX5-202ENST00000439541 GCC1Q96CN9 775 aa12.41□□□□□ -0.42
CBX5-202ENST00000439541 SIL1Q9H173 461 aa12.41□□□□□ -0.42
CBX5-202ENST00000439541 MYH3P11055 1940 aa12.41□□□□□ -0.42
CBX5-202ENST00000439541 SURF6O75683 361 aaKnown RBP12.41□□□□□ -0.42
CBX5-202ENST00000439541 PDE4AP27815 886 aa12.41□□□□□ -0.42
CBX5-202ENST00000439541 NUCB1Q02818 461 aa12.41□□□□□ -0.42
CBX5-202ENST00000439541 ANKRD45Q5TZF3 282 aa12.41□□□□□ -0.42
CBX5-202ENST00000439541 ILDR2Q71H61 639 aa12.41□□□□□ -0.42
CBX5-202ENST00000439541 ZNF594Q96JF6 807 aaPredicted RBP12.41□□□□□ -0.42
CBX5-202ENST00000439541 PLA2G12BQ9BX93 195 aa12.41□□□□□ -0.42
CBX5-202ENST00000439541 GREM2Q9H772 168 aa12.41□□□□□ -0.42
CBX5-202ENST00000439541 PDE8AO60658 829 aa12.4□□□□□ -0.42
CBX5-202ENST00000439541 HMGB2P26583 209 aaKnown RBP12.4□□□□□ -0.42
CBX5-202ENST00000439541 LRP5O75197 1615 aa12.39□□□□□ -0.43
CBX5-202ENST00000439541 GTF2E1P29083 439 aaPredicted RBP12.39□□□□□ -0.43
CBX5-202ENST00000439541 PTPN12Q05209 780 aaKnown RBP12.39□□□□□ -0.43
CBX5-202ENST00000439541 CHD1LQ86WJ1 897 aa12.39□□□□□ -0.43
CBX5-202ENST00000439541 FLAD1Q8NFF5 587 aa12.39□□□□□ -0.43
CBX5-202ENST00000439541 TTLL11Q8NHH1 800 aa12.39□□□□□ -0.43
CBX5-202ENST00000439541 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.39□□□□□ -0.43
CBX5-202ENST00000439541 POLRMTO00411 1230 aaKnown RBP12.39□□□□□ -0.43
CBX5-202ENST00000439541 NPHP1O15259 732 aa12.39□□□□□ -0.43
CBX5-202ENST00000439541 CSF1RP07333 972 aa12.39□□□□□ -0.43
CBX5-202ENST00000439541 TM4SF1P30408 202 aa12.39□□□□□ -0.43
CBX5-202ENST00000439541 CNBD1Q8NA66 436 aa12.39□□□□□ -0.43
CBX5-202ENST00000439541 OTUD7AQ8TE49 926 aaPredicted RBP12.39□□□□□ -0.43
CBX5-202ENST00000439541 NYXQ9GZU5 481 aa12.39□□□□□ -0.43
CBX5-202ENST00000439541 IL1RAPL2Q9NP60 686 aa12.39□□□□□ -0.43
CBX5-202ENST00000439541 OS9Q13438 667 aaPredicted RBP12.38□□□□□ -0.43
CBX5-202ENST00000439541 PRR5LQ6MZQ0 368 aa12.38□□□□□ -0.43
CBX5-202ENST00000439541 SERPINB2P05120 415 aa12.37□□□□□ -0.43
CBX5-202ENST00000439541 MMP10P09238 476 aa12.37□□□□□ -0.43
CBX5-202ENST00000439541 ITGA6P23229 1130 aa12.37□□□□□ -0.43
CBX5-202ENST00000439541 TPTE2Q6XPS3 522 aa12.37□□□□□ -0.43
CBX5-202ENST00000439541 C16orf71Q8IYS4 520 aaPredicted RBP12.37□□□□□ -0.43
CBX5-202ENST00000439541 SEC31BQ9NQW1 1179 aa12.37□□□□□ -0.43
CBX5-202ENST00000439541 SPEF2Q9C093 1822 aa12.37□□□□□ -0.43
CBX5-202ENST00000439541 NRXN2Q9P2S2 1712 aa12.37□□□□□ -0.43
CBX5-202ENST00000439541 CCDC57Q2TAC2 916 aa12.37□□□□□ -0.43
CBX5-202ENST00000439541 LRRC24Q50LG9 513 aa12.37□□□□□ -0.43
CBX5-202ENST00000439541 BACH2Q9BYV9 841 aa12.37□□□□□ -0.43
CBX5-202ENST00000439541 PUS3Q9BZE2 481 aaKnown RBP12.37□□□□□ -0.43
CBX5-202ENST00000439541 LRRCC1Q9C099 1032 aa12.37□□□□□ -0.43
CBX5-202ENST00000439541 COPRSQ9NQ92 184 aa12.37□□□□□ -0.43
CBX5-202ENST00000439541 SASH1O94885 1247 aa12.36□□□□□ -0.43
CBX5-202ENST00000439541 IFIT5Q13325 482 aaKnown RBP12.36□□□□□ -0.43
CBX5-202ENST00000439541 NLGN1Q8N2Q7 840 aa12.36□□□□□ -0.43
CBX5-202ENST00000439541 RHPN1Q8TCX5 695 aa12.36□□□□□ -0.43
CBX5-202ENST00000439541 RIC1Q4ADV7 1423 aa12.36□□□□□ -0.43
CBX5-202ENST00000439541 TAF7LQ5H9L4 462 aa12.35□□□□□ -0.43
CBX5-202ENST00000439541 TSHZ3Q63HK5 1081 aa12.35□□□□□ -0.43
CBX5-202ENST00000439541 TAF1P21675 1872 aa12.35□□□□□ -0.43
CBX5-202ENST00000439541 ANKRD31Q8N7Z5 1873 aa12.35□□□□□ -0.43
CBX5-202ENST00000439541 ANKRD18BA2A2Z9 1011 aa12.34□□□□□ -0.43
CBX5-202ENST00000439541 G3BP1Q13283 466 aaKnown RBP eCLIP12.34□□□□□ -0.43
CBX5-202ENST00000439541 R3HDM1Q15032 1099 aaKnown RBP12.34□□□□□ -0.43
CBX5-202ENST00000439541 CCDC152Q4G0S7 254 aa12.34□□□□□ -0.43
CBX5-202ENST00000439541 SLC10A5Q5PT55 438 aa12.34□□□□□ -0.43
CBX5-202ENST00000439541 PPP4R3CPQ6ZMV5 832 aa12.34□□□□□ -0.43
CBX5-202ENST00000439541 ATG9AQ7Z3C6 839 aa12.34□□□□□ -0.43
CBX5-202ENST00000439541 SLC51AQ86UW1 340 aa12.34□□□□□ -0.43
CBX5-202ENST00000439541 KIF1BPQ96EK5 621 aa12.34□□□□□ -0.43
CBX5-202ENST00000439541 RAB11FIP3O75154 756 aa12.34□□□□□ -0.43
CBX5-202ENST00000439541 ST5P78524 1137 aa12.34□□□□□ -0.43
CBX5-202ENST00000439541 COL11A2P13942 1736 aaPredicted RBP12.34□□□□□ -0.43
CBX5-202ENST00000439541 RTL9Q8NET4 1388 aa12.33□□□□□ -0.43
CBX5-202ENST00000439541 PSDA5PKW4 1024 aaPredicted RBP12.33□□□□□ -0.44
CBX5-202ENST00000439541 EYA2O00167 538 aa12.33□□□□□ -0.44
CBX5-202ENST00000439541 DEKP35659 375 aaKnown RBP12.33□□□□□ -0.44
CBX5-202ENST00000439541 TFCP2Q12800 502 aa12.33□□□□□ -0.44
CBX5-202ENST00000439541 SF3B3Q15393 1217 aaKnown RBP12.33□□□□□ -0.44
CBX5-202ENST00000439541 HSP90AB4PQ58FF6 505 aa12.33□□□□□ -0.44
CBX5-202ENST00000439541 DDRGK1Q96HY6 314 aa12.33□□□□□ -0.44
CBX5-202ENST00000439541 PARP3Q9Y6F1 533 aa12.33□□□□□ -0.44
CBX5-202ENST00000439541 ZBTB7AO95365 584 aa12.32□□□□□ -0.44
CBX5-202ENST00000439541 HSP90B1P14625 803 aaKnown RBP12.32□□□□□ -0.44
CBX5-202ENST00000439541 ERC1Q8IUD2 1116 aa12.32□□□□□ -0.44
CBX5-202ENST00000439541 NLRP3Q96P20 1036 aa12.32□□□□□ -0.44
CBX5-202ENST00000439541 TLR7Q9NYK1 1049 aaKnown RBP12.32□□□□□ -0.44
CBX5-202ENST00000439541 LDHAL6AQ6ZMR3 332 aa12.32□□□□□ -0.44
CBX5-202ENST00000439541 CELF1Q92879 486 aaKnown RBP12.32□□□□□ -0.44
CBX5-202ENST00000439541 SALL3Q9BXA9 1300 aa12.32□□□□□ -0.44
CBX5-202ENST00000439541 ZNF609O15014 1411 aa12.31□□□□□ -0.44
CBX5-202ENST00000439541 CIAO1O76071 339 aa12.31□□□□□ -0.44
CBX5-202ENST00000439541 AACSQ86V21 672 aa12.31□□□□□ -0.44
CBX5-202ENST00000439541 PLEKHM2Q8IWE5 1019 aa12.31□□□□□ -0.44
CBX5-202ENST00000439541 EAF2Q96CJ1 260 aaPredicted RBP12.31□□□□□ -0.44
CBX5-202ENST00000439541 CNNM1Q9NRU3 951 aa12.31□□□□□ -0.44
CBX5-202ENST00000439541 IL15P40933 162 aaPredicted RBP12.3□□□□□ -0.44
CBX5-202ENST00000439541 NBR1Q14596 966 aa12.3□□□□□ -0.44
CBX5-202ENST00000439541 A0A1B0GUL6 1792 aa12.3□□□□□ -0.44
CBX5-202ENST00000439541 TNNI3KQ59H18 835 aa12.3□□□□□ -0.44
CBX5-202ENST00000439541 CLASRPQ8N2M8 674 aaKnown RBP12.3□□□□□ -0.44
CBX5-202ENST00000439541 CCDC8Q9H0W5 538 aaPredicted RBP12.3□□□□□ -0.44
CBX5-202ENST00000439541 RIPOR2Q9Y4F9 1068 aa12.3□□□□□ -0.44
CBX5-202ENST00000439541 FPGT-TNNI3KV9GXZ4 949 aa12.3□□□□□ -0.44
CBX5-202ENST00000439541 GSPT1P15170 499 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms