RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 MAGEB6Q8N7X4 407 aa14.03□□□□□ -0.16
NEK1-201ENST00000439128 SAP30BPQ9UHR5 308 aaKnown RBP14.03□□□□□ -0.16
NEK1-201ENST00000439128 ATP7AQ04656 1500 aa14.03□□□□□ -0.16
NEK1-201ENST00000439128 METAP2P50579 478 aaKnown RBP eCLIP14.03□□□□□ -0.16
NEK1-201ENST00000439128 HEATR3Q7Z4Q2 680 aa14.03□□□□□ -0.16
NEK1-201ENST00000439128 KRT23Q9C075 422 aa14.03□□□□□ -0.16
NEK1-201ENST00000439128 SLC26A6Q9BXS9 759 aa14.02□□□□□ -0.16
NEK1-201ENST00000439128 NKTRP30414 1462 aaKnown RBP14.02□□□□□ -0.16
NEK1-201ENST00000439128 FAM182BQ5T319 152 aa14.02□□□□□ -0.16
NEK1-201ENST00000439128 FAM196AQ6ZSG2 479 aa14.02□□□□□ -0.16
NEK1-201ENST00000439128 USP16Q9Y5T5 823 aa14.02□□□□□ -0.16
NEK1-201ENST00000439128 SH3TC1Q8TE82 1336 aa14.02□□□□□ -0.17
NEK1-201ENST00000439128 C2CD5Q86YS7 1000 aa14.02□□□□□ -0.17
NEK1-201ENST00000439128 DNAJC5Q9H3Z4 198 aa14.02□□□□□ -0.17
NEK1-201ENST00000439128 TSPY26PQ9H489 355 aa14.02□□□□□ -0.17
NEK1-201ENST00000439128 ZNF790Q6PG37 636 aa14.02□□□□□ -0.17
NEK1-201ENST00000439128 ZFYP08048 801 aaPredicted RBP14.01□□□□□ -0.17
NEK1-201ENST00000439128 TCP11L1Q9NUJ3 509 aa14.01□□□□□ -0.17
NEK1-201ENST00000439128 RHPN1Q8TCX5 695 aa14.01□□□□□ -0.17
NEK1-201ENST00000439128 ATF5Q9Y2D1 282 aaPredicted RBP14.01□□□□□ -0.17
NEK1-201ENST00000439128 HIBADHP31937 336 aaKnown RBP14.01□□□□□ -0.17
NEK1-201ENST00000439128 NFKBIBQ15653 356 aa14.01□□□□□ -0.17
NEK1-201ENST00000439128 FERMT2Q96AC1 680 aa14.01□□□□□ -0.17
NEK1-201ENST00000439128 PA2G4Q9UQ80 394 aaKnown RBP14.01□□□□□ -0.17
NEK1-201ENST00000439128 ZNF335Q9H4Z2 1342 aaPredicted RBP14.01□□□□□ -0.17
NEK1-201ENST00000439128 DNAJC10Q8IXB1 793 aa14.01□□□□□ -0.17
NEK1-201ENST00000439128 TXLNBQ8N3L3 684 aa14.01□□□□□ -0.17
NEK1-201ENST00000439128 HOOK2Q96ED9 719 aa14.01□□□□□ -0.17
NEK1-201ENST00000439128 SH2D4AQ9H788 454 aa14.01□□□□□ -0.17
NEK1-201ENST00000439128 NPHP4O75161 1426 aaPredicted RBP14.01□□□□□ -0.17
NEK1-201ENST00000439128 PPFIA3O75145 1194 aa14.01□□□□□ -0.17
NEK1-201ENST00000439128 SP4Q02446 784 aa14.01□□□□□ -0.17
NEK1-201ENST00000439128 TEX11Q8IYF3 940 aa14.01□□□□□ -0.17
NEK1-201ENST00000439128 MPNDQ8N594 471 aa14.01□□□□□ -0.17
NEK1-201ENST00000439128 NEO1Q92859 1461 aa14□□□□□ -0.17
NEK1-201ENST00000439128 NEFHP12036 1026 aa14□□□□□ -0.17
NEK1-201ENST00000439128 C8orf58Q8NAV2 365 aa14□□□□□ -0.17
NEK1-201ENST00000439128 LINS1Q8NG48 757 aa14□□□□□ -0.17
NEK1-201ENST00000439128 A1BGP04217 495 aa14□□□□□ -0.17
NEK1-201ENST00000439128 NCBP1Q09161 790 aaKnown RBP14□□□□□ -0.17
NEK1-201ENST00000439128 DENND2AQ9ULE3 1009 aa14□□□□□ -0.17
NEK1-201ENST00000439128 IDEP14735 1019 aa14□□□□□ -0.17
NEK1-201ENST00000439128 A0A1W2PP64 1363 aa14□□□□□ -0.17
NEK1-201ENST00000439128 ITGA6P23229 1130 aa14□□□□□ -0.17
NEK1-201ENST00000439128 KLHL10Q6JEL2 608 aa14□□□□□ -0.17
NEK1-201ENST00000439128 TTC6Q86TZ1 520 aa14□□□□□ -0.17
NEK1-201ENST00000439128 LARP6Q9BRS8 491 aaKnown RBP14□□□□□ -0.17
NEK1-201ENST00000439128 IL16Q14005 1332 aa14□□□□□ -0.17
NEK1-201ENST00000439128 KIF20AO95235 890 aa13.99□□□□□ -0.17
NEK1-201ENST00000439128 CALM1P0DP23 149 aa13.99□□□□□ -0.17
NEK1-201ENST00000439128 CALM2P0DP24 149 aa13.99□□□□□ -0.17
NEK1-201ENST00000439128 CALM3P0DP25 149 aa13.99□□□□□ -0.17
NEK1-201ENST00000439128 ZYXQ15942 572 aaKnown RBP13.99□□□□□ -0.17
NEK1-201ENST00000439128 STXBP4Q6ZWJ1 553 aa13.99□□□□□ -0.17
NEK1-201ENST00000439128 GPHNQ9NQX3 736 aaPredicted RBP13.99□□□□□ -0.17
NEK1-201ENST00000439128 CCDC192P0DO97 292 aa13.99□□□□□ -0.17
NEK1-201ENST00000439128 KIF22Q14807 665 aa13.99□□□□□ -0.17
NEK1-201ENST00000439128 MEIS3Q99687 375 aa13.99□□□□□ -0.17
NEK1-201ENST00000439128 SLC52A2Q9HAB3 445 aa13.99□□□□□ -0.17
NEK1-201ENST00000439128 TSPOAP1O95153 1857 aa13.99□□□□□ -0.17
NEK1-201ENST00000439128 ERMNQ8TAM6 284 aa13.98□□□□□ -0.17
NEK1-201ENST00000439128 PUF60Q9UHX1 559 aaKnown RBP13.98□□□□□ -0.17
NEK1-201ENST00000439128 MAST3O60307 1309 aa13.98□□□□□ -0.17
NEK1-201ENST00000439128 PBRM1Q86U86 1689 aa13.98□□□□□ -0.17
NEK1-201ENST00000439128 SPDYE3A6NKU9 549 aa13.98□□□□□ -0.17
NEK1-201ENST00000439128 TBCAO75347 108 aaKnown RBP13.98□□□□□ -0.17
NEK1-201ENST00000439128 NAPAP54920 295 aa13.98□□□□□ -0.17
NEK1-201ENST00000439128 CNNM2Q9H8M5 875 aa13.98□□□□□ -0.17
NEK1-201ENST00000439128 DLGAP5Q15398 846 aa13.98□□□□□ -0.17
NEK1-201ENST00000439128 NEK1Q96PY6 1258 aa13.98□□□□□ -0.17
NEK1-201ENST00000439128 YEATS2Q9ULM3 1422 aa13.98□□□□□ -0.17
NEK1-201ENST00000439128 CBFA2T2O43439 604 aa13.98□□□□□ -0.17
NEK1-201ENST00000439128 PDE8AO60658 829 aa13.98□□□□□ -0.17
NEK1-201ENST00000439128 BRDTQ58F21 947 aaPredicted RBP13.98□□□□□ -0.17
NEK1-201ENST00000439128 MCM5P33992 734 aa13.97□□□□□ -0.17
NEK1-201ENST00000439128 PLBD2Q8NHP8 589 aa13.97□□□□□ -0.17
NEK1-201ENST00000439128 SMCR8Q8TEV9 937 aaPredicted RBP13.97□□□□□ -0.17
NEK1-201ENST00000439128 PAG1Q9NWQ8 432 aa13.97□□□□□ -0.17
NEK1-201ENST00000439128 RALGAPBQ86X10 1494 aa13.97□□□□□ -0.17
NEK1-201ENST00000439128 DCPSQ96C86 337 aaKnown RBP13.97□□□□□ -0.17
NEK1-201ENST00000439128 ZBTB21Q9ULJ3 1066 aa13.97□□□□□ -0.17
NEK1-201ENST00000439128 SBNO1A3KN83 1393 aa13.97□□□□□ -0.17
NEK1-201ENST00000439128 TFCP2Q12800 502 aa13.97□□□□□ -0.17
NEK1-201ENST00000439128 ENOX2Q16206 610 aaKnown RBP13.97□□□□□ -0.17
NEK1-201ENST00000439128 TCERG1LQ5VWI1 586 aa13.97□□□□□ -0.17
NEK1-201ENST00000439128 SPC24Q8NBT2 197 aa13.97□□□□□ -0.17
NEK1-201ENST00000439128 ERLIN2O94905 339 aa13.97□□□□□ -0.17
NEK1-201ENST00000439128 RFX1P22670 979 aa13.97□□□□□ -0.17
NEK1-201ENST00000439128 HMGN5P82970 282 aaKnown RBP13.97□□□□□ -0.17
NEK1-201ENST00000439128 ANKRD62A6NC57 917 aa13.97□□□□□ -0.17
NEK1-201ENST00000439128 FKBP15Q5T1M5 1219 aa13.97□□□□□ -0.17
NEK1-201ENST00000439128 GNAQP50148 359 aa13.96□□□□□ -0.17
NEK1-201ENST00000439128 USP8P40818 1118 aa13.96□□□□□ -0.17
NEK1-201ENST00000439128 CETN2P41208 172 aa13.96□□□□□ -0.17
NEK1-201ENST00000439128 AMPD3Q01432 767 aa13.96□□□□□ -0.17
NEK1-201ENST00000439128 CETN1Q12798 172 aa13.96□□□□□ -0.17
NEK1-201ENST00000439128 TCP10Q12799 353 aa13.96□□□□□ -0.17
NEK1-201ENST00000439128 GSE1Q14687 1217 aa13.96□□□□□ -0.17
NEK1-201ENST00000439128 TAF12Q16514 161 aa13.96□□□□□ -0.17
NEK1-201ENST00000439128 ZNF397Q8NF99 534 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms