RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 CTSWP56202 376 aa20.41■□□□□ 0.86
SNRPB-202ENST00000438552 CCDC85AQ96PX6 553 aaPredicted RBP20.41■□□□□ 0.86
SNRPB-202ENST00000438552 CHD4Q14839 1912 aa20.4■□□□□ 0.86
SNRPB-202ENST00000438552 SF3B3Q15393 1217 aaKnown RBP20.4■□□□□ 0.86
SNRPB-202ENST00000438552 SLC51AQ86UW1 340 aa20.4■□□□□ 0.86
SNRPB-202ENST00000438552 UTYO14607 1347 aa20.39■□□□□ 0.85
SNRPB-202ENST00000438552 NBPF7P0C2Y1 421 aaPredicted RBP20.39■□□□□ 0.85
SNRPB-202ENST00000438552 DDX46Q7L014 1031 aaKnown RBP20.39■□□□□ 0.85
SNRPB-202ENST00000438552 CRAMP1Q96RY5 1269 aa20.39■□□□□ 0.85
SNRPB-202ENST00000438552 C21orf2O43822 256 aa20.38■□□□□ 0.85
SNRPB-202ENST00000438552 ALDH1B1P30837 517 aa20.38■□□□□ 0.85
SNRPB-202ENST00000438552 CCDC152Q4G0S7 254 aa20.38■□□□□ 0.85
SNRPB-202ENST00000438552 INTS3Q68E01 1043 aaKnown RBP20.38■□□□□ 0.85
SNRPB-202ENST00000438552 FTSJ3Q8IY81 847 aaKnown RBP20.38■□□□□ 0.85
SNRPB-202ENST00000438552 SUCLG2Q96I99 432 aa20.38■□□□□ 0.85
SNRPB-202ENST00000438552 PLA2G12BQ9BX93 195 aa20.38■□□□□ 0.85
SNRPB-202ENST00000438552 PPEF1O14829 653 aaPredicted RBP20.37■□□□□ 0.85
SNRPB-202ENST00000438552 GRIN3BO60391 1043 aa20.37■□□□□ 0.85
SNRPB-202ENST00000438552 RLBP1P12271 317 aa20.37■□□□□ 0.85
SNRPB-202ENST00000438552 OLFM4Q6UX06 510 aa20.37■□□□□ 0.85
SNRPB-202ENST00000438552 TMEM57Q8N5G2 664 aa20.37■□□□□ 0.85
SNRPB-202ENST00000438552 TTLL11Q8NHH1 800 aa20.37■□□□□ 0.85
SNRPB-202ENST00000438552 USP44Q9H0E7 712 aa20.37■□□□□ 0.85
SNRPB-202ENST00000438552 SBF1O95248 1867 aa20.37■□□□□ 0.85
SNRPB-202ENST00000438552 CCDC88AQ3V6T2 1871 aa20.37■□□□□ 0.85
SNRPB-202ENST00000438552 PLIN1O60240 522 aa20.36■□□□□ 0.85
SNRPB-202ENST00000438552 FOXO4P98177 505 aa20.36■□□□□ 0.85
SNRPB-202ENST00000438552 GRAPQ13588 217 aa20.36■□□□□ 0.85
SNRPB-202ENST00000438552 EPHA10Q5JZY3 1008 aa20.36■□□□□ 0.85
SNRPB-202ENST00000438552 DZIP1LQ8IYY4 767 aaKnown RBP20.36■□□□□ 0.85
SNRPB-202ENST00000438552 GRAPLQ8TC17 118 aaPredicted RBP20.36■□□□□ 0.85
SNRPB-202ENST00000438552 GREM2Q9H772 168 aa20.36■□□□□ 0.85
SNRPB-202ENST00000438552 SEC31BQ9NQW1 1179 aa20.36■□□□□ 0.85
SNRPB-202ENST00000438552 RTL9Q8NET4 1388 aa20.35■□□□□ 0.85
SNRPB-202ENST00000438552 FAM161AQ3B820 660 aa20.35■□□□□ 0.85
SNRPB-202ENST00000438552 ARHGAP27Q6ZUM4 889 aa20.35■□□□□ 0.85
SNRPB-202ENST00000438552 C7orf43Q8WVR3 580 aa20.35■□□□□ 0.85
SNRPB-202ENST00000438552 CELF1Q92879 486 aaKnown RBP20.35■□□□□ 0.85
SNRPB-202ENST00000438552 KAZALD1Q96I82 304 aa20.35■□□□□ 0.85
SNRPB-202ENST00000438552 MEIS3Q99687 375 aa20.35■□□□□ 0.85
SNRPB-202ENST00000438552 A0A1B0GUL6 1792 aa20.34■□□□□ 0.85
SNRPB-202ENST00000438552 TIAM2Q8IVF5 1701 aa20.34■□□□□ 0.85
SNRPB-202ENST00000438552 YY1P25490 414 aa20.34■□□□□ 0.85
SNRPB-202ENST00000438552 RASSF7Q02833 373 aa20.34■□□□□ 0.85
SNRPB-202ENST00000438552 IFFO2Q5TF58 517 aa20.34■□□□□ 0.85
SNRPB-202ENST00000438552 SNED1Q8TER0 1413 aa20.34■□□□□ 0.85
SNRPB-202ENST00000438552 LTBP1Q14766 1721 aa20.33■□□□□ 0.85
SNRPB-202ENST00000438552 UBTFL1P0CB47 393 aaPredicted RBP20.33■□□□□ 0.85
SNRPB-202ENST00000438552 PANK1Q8TE04 598 aa20.33■□□□□ 0.85
SNRPB-202ENST00000438552 BICC1Q9H694 974 aaKnown RBP20.33■□□□□ 0.85
SNRPB-202ENST00000438552 CHMP3Q9Y3E7 222 aa20.33■□□□□ 0.85
SNRPB-202ENST00000438552 NFKBIEO00221 500 aa20.32■□□□□ 0.84
SNRPB-202ENST00000438552 CSF1RP07333 972 aa20.32■□□□□ 0.84
SNRPB-202ENST00000438552 CCDC93Q567U6 631 aa20.32■□□□□ 0.84
SNRPB-202ENST00000438552 LMBR1LQ6UX01 489 aa20.32■□□□□ 0.84
SNRPB-202ENST00000438552 ITPRIPQ8IWB1 547 aa20.32■□□□□ 0.84
SNRPB-202ENST00000438552 DUOX1Q9NRD9 1551 aa20.31■□□□□ 0.84
SNRPB-202ENST00000438552 ITGA6P23229 1130 aa20.31■□□□□ 0.84
SNRPB-202ENST00000438552 SOGA3Q5TF21 947 aa20.31■□□□□ 0.84
SNRPB-202ENST00000438552 ANKRD44Q8N8A2 993 aa20.31■□□□□ 0.84
SNRPB-202ENST00000438552 DICER1Q9UPY3 1922 aaKnown RBP20.3■□□□□ 0.84
SNRPB-202ENST00000438552 BBOX1O75936 387 aa20.3■□□□□ 0.84
SNRPB-202ENST00000438552 CDC5LQ99459 802 aaKnown RBP20.3■□□□□ 0.84
SNRPB-202ENST00000438552 ATP6V0A2Q9Y487 856 aa20.3■□□□□ 0.84
SNRPB-202ENST00000438552 RPS8P62241 208 aaKnown RBP20.29■□□□□ 0.84
SNRPB-202ENST00000438552 ANKRD18AQ8IVF6 992 aa20.29■□□□□ 0.84
SNRPB-202ENST00000438552 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.29■□□□□ 0.84
SNRPB-202ENST00000438552 LRRFIP2Q9Y608 721 aaKnown RBP20.29■□□□□ 0.84
SNRPB-202ENST00000438552 GNAI3P08754 354 aa20.28■□□□□ 0.84
SNRPB-202ENST00000438552 RABL6Q3YEC7 729 aaPredicted RBP20.28■□□□□ 0.84
SNRPB-202ENST00000438552 C20orf194Q5TEA3 1177 aa20.28■□□□□ 0.84
SNRPB-202ENST00000438552 TMC4Q7Z404 712 aa20.28■□□□□ 0.84
SNRPB-202ENST00000438552 ANKRD18BA2A2Z9 1011 aa20.27■□□□□ 0.84
SNRPB-202ENST00000438552 MS4A1P11836 297 aa20.27■□□□□ 0.84
SNRPB-202ENST00000438552 PRELPP51888 382 aa20.27■□□□□ 0.84
SNRPB-202ENST00000438552 IFIT5Q13325 482 aaKnown RBP20.27■□□□□ 0.84
SNRPB-202ENST00000438552 SP8Q8IXZ3 490 aa20.27■□□□□ 0.84
SNRPB-202ENST00000438552 TAOK3Q9H2K8 898 aa20.27■□□□□ 0.84
SNRPB-202ENST00000438552 LTBP3Q9NS15 1303 aa20.27■□□□□ 0.83
SNRPB-202ENST00000438552 RRP1P56182 461 aaKnown RBP20.26■□□□□ 0.83
SNRPB-202ENST00000438552 FKBP4Q02790 459 aaKnown RBP eCLIP20.26■□□□□ 0.83
SNRPB-202ENST00000438552 CC2D2BQ6DHV5 1058 aa20.26■□□□□ 0.83
SNRPB-202ENST00000438552 RTKN2Q8IZC4 609 aa20.26■□□□□ 0.83
SNRPB-202ENST00000438552 COG6Q9Y2V7 657 aa20.26■□□□□ 0.83
SNRPB-202ENST00000438552 IGHMBP2P38935 993 aaKnown RBP20.25■□□□□ 0.83
SNRPB-202ENST00000438552 MVPQ14764 893 aaKnown RBP20.25■□□□□ 0.83
SNRPB-202ENST00000438552 CCDC57Q2TAC2 916 aa20.25■□□□□ 0.83
SNRPB-202ENST00000438552 ZNF594Q96JF6 807 aaPredicted RBP20.25■□□□□ 0.83
SNRPB-202ENST00000438552 TMX4Q9H1E5 349 aaPredicted RBP20.25■□□□□ 0.83
SNRPB-202ENST00000438552 TAF7LQ5H9L4 462 aa20.24■□□□□ 0.83
SNRPB-202ENST00000438552 COL4A5P29400 1685 aa20.23■□□□□ 0.83
SNRPB-202ENST00000438552 GPSM2P81274 684 aa20.23■□□□□ 0.83
SNRPB-202ENST00000438552 C9orf131Q5VYM1 1079 aa20.23■□□□□ 0.83
SNRPB-202ENST00000438552 DPP8Q6V1X1 898 aaPredicted RBP20.23■□□□□ 0.83
SNRPB-202ENST00000438552 PSMD1Q99460 953 aa20.23■□□□□ 0.83
SNRPB-202ENST00000438552 C1orf115Q9H7X2 142 aa20.23■□□□□ 0.83
SNRPB-202ENST00000438552 ZNF277Q9NRM2 450 aaPredicted RBP20.23■□□□□ 0.83
SNRPB-202ENST00000438552 BSDC1Q9NW68 430 aaPredicted RBP20.23■□□□□ 0.83
SNRPB-202ENST00000438552 RNF181Q9P0P0 153 aa20.23■□□□□ 0.83
SNRPB-202ENST00000438552 HDAC5Q9UQL6 1122 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms