RNA–Protein interactions for RNA: ENST00000437900.1

LINC01007-202, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 1 (best)

Gene LINC01007, Length 1,485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-202ENST00000437900 CNBD1Q8NA66 436 aa17.75■□□□□ 0.43
LINC01007-202ENST00000437900 MSH5O43196 834 aa17.74■□□□□ 0.43
LINC01007-202ENST00000437900 GTF2E1P29083 439 aaPredicted RBP17.74■□□□□ 0.43
LINC01007-202ENST00000437900 SF3B3Q15393 1217 aaKnown RBP17.74■□□□□ 0.43
LINC01007-202ENST00000437900 CCDC57Q2TAC2 916 aa17.74■□□□□ 0.43
LINC01007-202ENST00000437900 FAM161AQ3B820 660 aa17.74■□□□□ 0.43
LINC01007-202ENST00000437900 ERC1Q8IUD2 1116 aa17.74■□□□□ 0.43
LINC01007-202ENST00000437900 LRRCC1Q9C099 1032 aa17.74■□□□□ 0.43
LINC01007-202ENST00000437900 NRXN2Q9P2S2 1712 aa17.73■□□□□ 0.43
LINC01007-202ENST00000437900 SERPINB2P05120 415 aa17.73■□□□□ 0.43
LINC01007-202ENST00000437900 IFIT5Q13325 482 aaKnown RBP17.73■□□□□ 0.43
LINC01007-202ENST00000437900 CCDC152Q4G0S7 254 aa17.73■□□□□ 0.43
LINC01007-202ENST00000437900 PRR5LQ6MZQ0 368 aa17.73■□□□□ 0.43
LINC01007-202ENST00000437900 SLC16A10Q8TF71 515 aa17.73■□□□□ 0.43
LINC01007-202ENST00000437900 KIF1BPQ96EK5 621 aa17.73■□□□□ 0.43
LINC01007-202ENST00000437900 GREM2Q9H772 168 aa17.73■□□□□ 0.43
LINC01007-202ENST00000437900 PA2G4Q9UQ80 394 aaKnown RBP17.73■□□□□ 0.43
LINC01007-202ENST00000437900 CHMP3Q9Y3E7 222 aa17.73■□□□□ 0.43
LINC01007-202ENST00000437900 CIAO1O76071 339 aa17.72■□□□□ 0.43
LINC01007-202ENST00000437900 LRP5O75197 1615 aa17.72■□□□□ 0.43
LINC01007-202ENST00000437900 ITGA6P23229 1130 aa17.71■□□□□ 0.43
LINC01007-202ENST00000437900 G3BP1Q13283 466 aaKnown RBP eCLIP17.71■□□□□ 0.43
LINC01007-202ENST00000437900 RHPN1Q8TCX5 695 aa17.71■□□□□ 0.43
LINC01007-202ENST00000437900 LNPKQ9C0E8 428 aa17.71■□□□□ 0.43
LINC01007-202ENST00000437900 ANKRD18BA2A2Z9 1011 aa17.7■□□□□ 0.42
LINC01007-202ENST00000437900 PDE4AP27815 886 aa17.7■□□□□ 0.42
LINC01007-202ENST00000437900 KLHDC4Q8TBB5 520 aa17.7■□□□□ 0.42
LINC01007-202ENST00000437900 NLRP3Q96P20 1036 aa17.7■□□□□ 0.42
LINC01007-202ENST00000437900 ZBTB47Q9UFB7 747 aaPredicted RBP17.7■□□□□ 0.42
LINC01007-202ENST00000437900 EYA2O00167 538 aa17.69■□□□□ 0.42
LINC01007-202ENST00000437900 MMP10P09238 476 aa17.69■□□□□ 0.42
LINC01007-202ENST00000437900 ST5P78524 1137 aa17.69■□□□□ 0.42
LINC01007-202ENST00000437900 KLRG2A4D1S0 409 aaPredicted RBP17.69■□□□□ 0.42
LINC01007-202ENST00000437900 SASH1O94885 1247 aa17.69■□□□□ 0.42
LINC01007-202ENST00000437900 IL15P40933 162 aaPredicted RBP17.69■□□□□ 0.42
LINC01007-202ENST00000437900 OS9Q13438 667 aaPredicted RBP17.69■□□□□ 0.42
LINC01007-202ENST00000437900 C3orf67Q6ZVT6 689 aa17.69■□□□□ 0.42
LINC01007-202ENST00000437900 ATG9AQ7Z3C6 839 aa17.69■□□□□ 0.42
LINC01007-202ENST00000437900 NPHP1O15259 732 aa17.68■□□□□ 0.42
LINC01007-202ENST00000437900 CRY2Q49AN0 593 aa17.68■□□□□ 0.42
LINC01007-202ENST00000437900 SKAP1Q86WV1 359 aa17.68■□□□□ 0.42
LINC01007-202ENST00000437900 PELP1Q8IZL8 1130 aaKnown RBP17.68■□□□□ 0.42
LINC01007-202ENST00000437900 CCDC85AQ96PX6 553 aaPredicted RBP17.68■□□□□ 0.42
LINC01007-202ENST00000437900 SIL1Q9H173 461 aa17.68■□□□□ 0.42
LINC01007-202ENST00000437900 PARP3Q9Y6F1 533 aa17.68■□□□□ 0.42
LINC01007-202ENST00000437900 TNRC6CQ9HCJ0 1690 aaKnown RBP17.67■□□□□ 0.42
LINC01007-202ENST00000437900 APBB1O00213 710 aa17.67■□□□□ 0.42
LINC01007-202ENST00000437900 ZNF594Q96JF6 807 aaPredicted RBP17.67■□□□□ 0.42
LINC01007-202ENST00000437900 SALL3Q9BXA9 1300 aa17.67■□□□□ 0.42
LINC01007-202ENST00000437900 SMARCA5O60264 1052 aaPredicted RBP17.66■□□□□ 0.42
LINC01007-202ENST00000437900 RGS3P49796 1198 aa17.66■□□□□ 0.42
LINC01007-202ENST00000437900 TAF7LQ5H9L4 462 aa17.66■□□□□ 0.42
LINC01007-202ENST00000437900 MSL1Q68DK7 614 aa17.66■□□□□ 0.42
LINC01007-202ENST00000437900 CDC5LQ99459 802 aaKnown RBP17.66■□□□□ 0.42
LINC01007-202ENST00000437900 BRIP1Q9BX63 1249 aa17.66■□□□□ 0.42
LINC01007-202ENST00000437900 RIPOR2Q9Y4F9 1068 aa17.66■□□□□ 0.42
LINC01007-202ENST00000437900 CASZ1Q86V15 1759 aa17.66■□□□□ 0.42
LINC01007-202ENST00000437900 CLASRPQ8N2M8 674 aaKnown RBP17.65■□□□□ 0.42
LINC01007-202ENST00000437900 PDGFDQ9GZP0 370 aaPredicted RBP17.65■□□□□ 0.42
LINC01007-202ENST00000437900 GPR108Q9NPR9 543 aa17.65■□□□□ 0.42
LINC01007-202ENST00000437900 SEC31BQ9NQW1 1179 aa17.65■□□□□ 0.42
LINC01007-202ENST00000437900 LRRC24Q50LG9 513 aa17.64■□□□□ 0.41
LINC01007-202ENST00000437900 LDHAL6AQ6ZMR3 332 aa17.64■□□□□ 0.41
LINC01007-202ENST00000437900 ILDR2Q71H61 639 aa17.64■□□□□ 0.41
LINC01007-202ENST00000437900 PLEKHM2Q8IWE5 1019 aa17.64■□□□□ 0.41
LINC01007-202ENST00000437900 PUS3Q9BZE2 481 aaKnown RBP17.64■□□□□ 0.41
LINC01007-202ENST00000437900 OSBPL3Q9H4L5 887 aa17.64■□□□□ 0.41
LINC01007-202ENST00000437900 IL1RAPL2Q9NP60 686 aa17.64■□□□□ 0.41
LINC01007-202ENST00000437900 HOXA10P31260 410 aaPredicted RBP17.63■□□□□ 0.41
LINC01007-202ENST00000437900 CCDC24Q8N4L8 307 aa17.63■□□□□ 0.41
LINC01007-202ENST00000437900 STAP2Q9UGK3 403 aa17.63■□□□□ 0.41
LINC01007-202ENST00000437900 AOX1Q06278 1338 aa17.63■□□□□ 0.41
LINC01007-202ENST00000437900 IGHMBP2P38935 993 aaKnown RBP17.63■□□□□ 0.41
LINC01007-202ENST00000437900 TFCP2Q12800 502 aa17.63■□□□□ 0.41
LINC01007-202ENST00000437900 C16orf71Q8IYS4 520 aaPredicted RBP17.63■□□□□ 0.41
LINC01007-202ENST00000437900 OTUD7AQ8TE49 926 aaPredicted RBP17.63■□□□□ 0.41
LINC01007-202ENST00000437900 MROH5Q6ZUA9 1318 aa17.62■□□□□ 0.41
LINC01007-202ENST00000437900 DDX46Q7L014 1031 aaKnown RBP17.62■□□□□ 0.41
LINC01007-202ENST00000437900 ANKRD18AQ8IVF6 992 aa17.62■□□□□ 0.41
LINC01007-202ENST00000437900 VGLL2Q8N8G2 317 aa17.62■□□□□ 0.41
LINC01007-202ENST00000437900 EAF2Q96CJ1 260 aaPredicted RBP17.62■□□□□ 0.41
LINC01007-202ENST00000437900 MPHOSPH8Q99549 860 aa17.62■□□□□ 0.41
LINC01007-202ENST00000437900 CNNM1Q9NRU3 951 aa17.62■□□□□ 0.41
LINC01007-202ENST00000437900 BSDC1Q9NW68 430 aaPredicted RBP17.62■□□□□ 0.41
LINC01007-202ENST00000437900 CEP126Q9P2H0 1117 aa17.62■□□□□ 0.41
LINC01007-202ENST00000437900 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.62■□□□□ 0.41
LINC01007-202ENST00000437900 ANKRD31Q8N7Z5 1873 aa17.62■□□□□ 0.41
LINC01007-202ENST00000437900 MX1P20591 662 aa17.61■□□□□ 0.41
LINC01007-202ENST00000437900 PDE6BP35913 854 aa17.61■□□□□ 0.41
LINC01007-202ENST00000437900 PDE1AP54750 535 aa17.61■□□□□ 0.41
LINC01007-202ENST00000437900 RPS8P62241 208 aaKnown RBP17.61■□□□□ 0.41
LINC01007-202ENST00000437900 TNNI3KQ59H18 835 aa17.61■□□□□ 0.41
LINC01007-202ENST00000437900 MTFR1LQ9H019 292 aa17.61■□□□□ 0.41
LINC01007-202ENST00000437900 FPGT-TNNI3KV9GXZ4 949 aa17.61■□□□□ 0.41
LINC01007-202ENST00000437900 COL4A1P02462 1669 aa17.61■□□□□ 0.41
LINC01007-202ENST00000437900 AACSQ86V21 672 aa17.6■□□□□ 0.41
LINC01007-202ENST00000437900 AKAP2Q9Y2D5 859 aa17.6■□□□□ 0.41
LINC01007-202ENST00000437900 ZNF609O15014 1411 aa17.6■□□□□ 0.41
LINC01007-202ENST00000437900 TTC41PQ6P2S7 1318 aa17.59■□□□□ 0.41
LINC01007-202ENST00000437900 IFIT2P09913 472 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms